Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.8e-141 506.1 292 100.0
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 6.5e-112 407.9 295 83.4
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 2.3e-101 372.9 295 70.8
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 8.3e-67 258.1 303 51.2
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 3.4e-60 236.1 289 51.6
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 5.4e-58 228.8 286 50.3
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 2.7e-57 226.5 288 51.0
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 7.8e-57 224.9 301 48.2
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.7e-56 223.8 299 46.8
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 8.6e-56 221.5 296 50.7
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 5.8e-52 208.8 288 48.6
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 6.4e-51 205.3 297 46.5
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 5.4e-50 202.2 297 45.1
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.6e-49 200.7 307 52.8
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 1.3e-48 197.6 278 45.0
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 3.0e-48 196.4 302 44.7
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 2.4e-45 186.8 302 44.4
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 3.8e-43 179.5 290 43.1
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 3.0e-40 169.9 247 43.7
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 6.4e-35 152.1 279 39.4
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 3.2e-34 149.8 243 43.2
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 7.1e-34 148.7 284 40.5
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 7.1e-34 148.7 287 39.4
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 1.2e-33 147.9 287 38.7
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 8.7e-32 141.7 299 37.8
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 2.5e-31 140.2 271 38.7
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 2.8e-30 136.7 274 39.8
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.7e-30 136.3 280 38.6
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 3.1e-29 133.3 258 39.1
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 9.0e-29 131.7 298 35.9
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 4.5e-28 129.4 309 35.0
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 9.9e-28 128.3 202 46.0
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.1e-26 124.8 141 56.0
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 1.1e-26 124.8 279 39.4
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 7.1e-26 122.1 261 36.0
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 9.3e-26 121.7 263 36.9
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.2e-25 121.3 281 37.4
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 6.0e-25 119.0 274 36.1
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 6.0e-25 119.0 274 36.1
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 7.9e-25 118.6 141 52.5
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 5.1e-24 115.9 296 34.8
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.5e-23 114.4 267 36.3
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 4.3e-23 112.8 266 36.1
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 7.4e-23 112.1 258 36.4
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 7.4e-23 112.1 253 35.2
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.3e-22 111.3 293 34.8
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.3e-22 111.3 259 36.3
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 8.2e-22 108.6 294 35.0
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.4e-21 107.8 269 35.3
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 4.0e-21 106.3 243 36.6
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 4.0e-21 106.3 252 35.7
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 1.2e-20 104.8 119 56.3
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 2.0e-20 104.0 256 34.0
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 2.6e-20 103.6 126 50.8
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 4.5e-20 102.8 250 38.8
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 5.8e-20 102.4 284 31.0
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 7.6e-20 102.1 253 34.8
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 7.6e-20 102.1 289 36.0
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.0e-19 101.7 253 34.8
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 1.7e-19 100.9 276 35.9
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.2e-19 100.5 253 34.4
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 2.2e-19 100.5 129 50.4
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 2.9e-19 100.1 254 37.0
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 3.8e-19 99.8 252 33.7
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 6.5e-19 99.0 154 46.1
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 6.5e-19 99.0 128 53.1
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 1.1e-18 98.2 247 33.2
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 1.4e-18 97.8 125 49.6
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 2.5e-18 97.1 248 34.3
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 5.5e-18 95.9 250 32.8
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 7.1e-18 95.5 133 43.6
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 7.1e-18 95.5 121 49.6
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 1.2e-17 94.7 255 34.1
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 3.5e-17 93.2 186 37.1
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 4.6e-17 92.8 123 48.0
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 7.9e-17 92.0 181 39.8
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 1.0e-16 91.7 182 36.8
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 2.3e-16 90.5 276 30.8
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 2.3e-16 90.5 269 34.6
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.1e-15 88.2 116 56.9
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.1e-15 88.2 116 56.9
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.9e-15 87.4 156 44.2
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 3.3e-15 86.7 129 42.6
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 4.3e-15 86.3 154 43.5
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 5.7e-15 85.9 129 42.6
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 7.4e-15 85.5 259 30.1
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 7.4e-15 85.5 134 38.1
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 3.7e-14 83.2 207 35.3
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 4.8e-14 82.8 277 33.9
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 8.2e-14 82.0 128 41.4
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 1.1e-13 81.6 248 33.1
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 1.4e-13 81.3 271 31.0
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 9.0e-13 78.6 128 40.6
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 9.0e-13 78.6 132 41.7
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 1.5e-12 77.8 118 41.5
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 2.0e-12 77.4 261 33.7
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 2.6e-12 77.0 257 31.5
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 4.5e-12 76.3 133 39.8
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 5.9e-12 75.9 219 28.8
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.0e-11 75.1 266 31.6
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.3e-11 74.7 171 37.4
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 6.5e-11 72.4 257 30.0
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 1.9e-10 70.9 242 31.8
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 4.2e-10 69.7 151 40.4
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 7.2e-10 68.9 150 37.3
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.2e-09 68.2 125 38.4
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.2e-09 68.2 270 31.1
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 7.9e-09 65.5 186 34.4
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 7.9e-09 65.5 231 29.4
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 7.9e-09 65.5 125 37.6
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.0e-08 63.5 161 36.6
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 1.1e-07 61.6 319 29.5
Ah.09g236140 Amaranthus hybridus HOM05D006486 ORTHO05D007888 7.4e-07 58.9 154 37.7


User provided reference genes

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