Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G220400 Phaseolus vulgaris HOM05D007101 ORTHO05D008632 9.4e-271 937.2 887 100.0
VMungo0251G0107 Vigna mungo HOM05D007101 ORTHO05D008632 9.8e-236 820.8 885 89.3
Glyma.08G060600 Glycine max HOM05D007101 ORTHO05D008632 8.1e-206 721.5 883 87.0
Lj4g0005302 Lotus japonicus HOM05D007101 ORTHO05D008632 6.1e-161 572.4 888 77.5
arahy.Tifrunner.gnm1.ann1.RGU3X9 Arachis hypogaea HOM05D007101 ORTHO05D008632 5.3e-157 559.3 883 78.0
Ca_18469_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 1.1e-154 551.6 884 78.5
Ca_30070_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 1.1e-154 551.6 884 78.5
TPR.G15380 Trifolium pratense HOM05D007101 ORTHO05D008632 2.1e-145 520.8 882 77.3
Lalb_Chr05g0218081 Lupinus albus HOM05D007101 ORTHO05D008632 3.6e-145 520.0 883 73.6
arahy.Tifrunner.gnm1.ann1.RR3D2P Arachis hypogaea HOM05D007101 ORTHO05D008632 2.2e-139 500.7 883 75.8
Medtr4g091600 Medicago truncatula HOM05D007101 ORTHO05D008632 7.0e-117 426.0 887 71.5
arahy.Tifrunner.gnm1.ann1.X169V3 Arachis hypogaea HOM05D007101 ORTHO05D008632 5.6e-114 416.4 859 70.4
RcHm_v2.0_Chr6g0280761 Rosa chinensis HOM05D007101 ORTHO05D008632 1.0e-107 395.6 882 68.4
Cfa005353 Carpinus fangiana HOM05D007101 ORTHO05D008632 3.4e-103 380.6 883 70.3
Glyma.07G188700 Glycine max HOM05D007101 ORTHO05D008632 6.8e-88 329.7 892 45.0
Sed0027220 Sechium edule HOM05D007101 ORTHO05D008632 3.7e-86 323.9 886 63.1
GSVIVG01023885001 Vitis vinifera HOM05D007101 ORTHO05D008632 1.9e-85 321.6 889 65.9
Actinidia17999 Actinidia chinensis HOM05D007101 ORTHO05D008632 4.1e-85 320.5 884 66.4
FAN15G1235 Fragaria x ananassa HOM05D007101 ORTHO05D008632 5.4e-85 320.1 877 66.0
CSS0049741 Camellia sinensis var. sinensis HOM05D007101 ORTHO05D008632 2.1e-84 318.2 886 62.3
Prupe.8G178500 Prunus persica HOM05D007101 ORTHO05D008632 6.0e-84 316.6 882 66.4
CiPaw.06G116300 Carya illinoinensis HOM05D007101 ORTHO05D008632 3.9e-83 313.9 877 63.9
FvH4_2g16640 Fragaria vesca HOM05D007101 ORTHO05D008632 8.6e-83 312.8 869 66.3
QL11p055950 Quercus lobata HOM05D007101 ORTHO05D008632 8.6e-83 312.8 880 66.6
TWI15G0633 Tripterygium wilfordii HOM05D007101 ORTHO05D008632 5.6e-82 310.1 874 64.8
ClCG02G003480 Citrullus lanatus HOM05D007101 ORTHO05D008632 5.2e-80 303.5 889 62.9
Haze_02013 Corylus avellana HOM05D007101 ORTHO05D008632 6.8e-80 303.1 880 66.4
Dinv41876 Davidia involucrata HOM05D007101 ORTHO05D008632 2.0e-79 301.6 889 54.7
Cpa.g.sc20.207 Carica papaya HOM05D007101 ORTHO05D008632 9.9e-79 299.3 888 61.0
Duzib132G1059 Durio zibethinus HOM05D007101 ORTHO05D008632 9.9e-79 299.3 878 62.8
COL.COLO4_17930 Corchorus olitorius HOM05D007101 ORTHO05D008632 2.2e-78 298.1 885 60.2
MD10G1139700 Malus domestica HOM05D007101 ORTHO05D008632 6.0e-76 290.0 882 65.5
Manes.11G110800 Manihot esculenta HOM05D007101 ORTHO05D008632 6.0e-76 290.0 888 65.3
TAR376G1071 Trochodendron aralioides HOM05D007101 ORTHO05D008632 6.6e-75 286.6 884 62.7
Sabra04G0138800 Salix brachista HOM05D007101 ORTHO05D008632 5.6e-74 283.5 882 65.2
Rhsim01G0003500 Rhododendron simsii HOM05D007101 ORTHO05D008632 5.3e-72 276.9 888 61.5
Potri.004G205600 Populus trichocarpa HOM05D007101 ORTHO05D008632 9.0e-72 276.2 881 65.2
MELO3C013256.2 Cucumis melo HOM05D007101 ORTHO05D008632 1.7e-70 271.9 889 57.4
CsaV3_7G001820 Cucumis sativus L. HOM05D007101 ORTHO05D008632 2.4e-69 268.1 889 57.3
Ah.01g023750 Amaranthus hybridus HOM05D000564 ORTHO05D002780 7.1e-69 266.5 868 62.7
THA.LOC104819686 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 3.8e-62 244.2 888 59.9
Eucgr.I01520 Eucalyptus grandis HOM05D007101 ORTHO05D008632 1.9e-61 241.9 882 60.4
Gorai.012G159300 Gossypium raimondii HOM05D007101 ORTHO05D008632 1.9e-61 241.9 878 60.4
PGR142G0716 Punica granatum HOM05D007101 ORTHO05D008632 4.2e-61 240.7 890 60.6
BcaB03g16462 Brassica carinata HOM05D007101 ORTHO05D008632 9.3e-61 239.6 879 62.9
vmacro02332 Vaccinium macrocarpon HOM05D007101 ORTHO05D008632 1.6e-60 238.8 903 59.8
Gohir.D04G170700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 2.7e-60 238.0 878 60.1
Aa31LG8G14540 Aethionema arabicum HOM05D007101 ORTHO05D008632 2.3e-59 235.0 888 60.9
Gohir.A04G125700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 2.3e-59 235.0 878 60.0
TAR629G2938 Trochodendron aralioides HOM05D007101 ORTHO05D008632 6.7e-59 233.4 202 58.9
Thecc.02G044400 Theobroma cacao HOM05D007101 ORTHO05D008632 1.1e-58 232.6 883 60.0
Aqoxy6G01656 Aquilegia oxysepala HOM05D007101 ORTHO05D008632 1.9e-58 231.9 887 57.8
C07p06350 Brassica napus HOM05D007101 ORTHO05D008632 1.6e-57 228.8 884 61.9
AL3G49990 Arabidopsis lyrata HOM05D007101 ORTHO05D008632 3.7e-57 227.6 888 61.3
CAN.G157.9 Capsicum annuum HOM05D007101 ORTHO05D008632 6.9e-56 223.4 882 62.5
Cc03_g11620 Coffea canephora HOM05D007101 ORTHO05D008632 5.8e-55 220.3 445 54.8
CARHR293460 Cardamine hirsuta HOM05D007101 ORTHO05D008632 1.3e-54 219.2 883 61.8
MBI06_g35039_MAGBIO Magnolia biondii HOM05D007101 ORTHO05D008632 1.3e-54 219.2 897 55.9
Peaxi162Scf00818g00019 Petunia axillaris HOM05D007101 ORTHO05D008632 1.1e-53 216.1 883 58.1
Ciclev10027787m.g Citrus clementina HOM05D007101 ORTHO05D008632 1.4e-53 215.7 878 57.5
Lj9A406T59 Lonicera japonica HOM05D007101 ORTHO05D008632 2.5e-53 214.9 885 61.8
Hund06163 Selenicereus undatus HOM05D007101 ORTHO05D008632 7.1e-53 213.4 891 62.0
SGA_v2.0_scaffold32G13346 Striga asiatica HOM05D007101 ORTHO05D008632 1.2e-52 212.6 885 58.5
Thhalv10022542m.g Eutrema salsugineum HOM05D007101 ORTHO05D008632 1.6e-52 212.2 885 60.6
SalBow1G7566 Salvia bowleyana HOM05D007101 ORTHO05D008632 2.1e-52 211.8 883 55.9
PGSC0003DMG400019836 Solanum tuberosum HOM05D007101 ORTHO05D008632 2.7e-52 211.5 366 67.5
EL10Ac9g21242 Beta vulgaris HOM05D007101 ORTHO05D008632 3.5e-52 211.1 881 62.5
BraA07t28190Z Brassica rapa HOM05D007101 ORTHO05D008632 5.1e-51 207.2 884 60.7
MSTRG.17820 Avicennia marina HOM05D007101 ORTHO05D008632 8.7e-51 206.5 374 65.8
AUR62012916 Chenopodium quinoa HOM05D007101 ORTHO05D008632 8.7e-51 206.5 384 65.9
A07p03990 Brassica napus HOM05D007101 ORTHO05D008632 1.9e-50 205.3 884 60.7
BcaC06g36224 Brassica carinata HOM05D007101 ORTHO05D008632 2.5e-50 204.9 884 60.9
AT2G17140 Arabidopsis thaliana HOM05D007101 ORTHO05D008632 9.6e-50 203.0 888 61.0
DCAR_015659 Daucus carota HOM05D000046 ORTHO05D008632 9.6e-50 203.0 884 57.8
AUR62027126 Chenopodium quinoa HOM05D007101 ORTHO05D008632 1.6e-49 202.2 369 67.2
Sc14g0002450 Simmondsia chinensis HOM05D007101 ORTHO05D008632 3.7e-49 201.1 891 55.9
Oeu059796.1 Olea europaea HOM05D007101 ORTHO05D008632 6.3e-49 200.3 197 49.7
Solyc02g021020.4 Solanum lycopersicum HOM05D007101 ORTHO05D008632 6.3e-49 200.3 367 66.2
Sopen02g005320 Solanum pennellii HOM05D007101 ORTHO05D008632 1.1e-48 199.5 366 66.1
Atru.chr5.3546 Acer truncatum HOM05D007101 ORTHO05D008632 2.6e-47 194.9 793 65.7
BolC7t41051H Brassica oleracea HOM05D007101 ORTHO05D008632 2.6e-47 194.9 879 60.8
Migut.B00010 Erythranthe guttata HOM05D007101 ORTHO05D008632 4.5e-47 194.1 368 65.5
Nitab4.5_0000526g0060 Nicotiana tabacum HOM05D007101 ORTHO05D008632 3.0e-43 181.4 848 58.4
Nitab4.5_0006710g0010 Nicotiana tabacum HOM05D007101 ORTHO05D008632 3.3e-42 177.9 848 58.1
FAN24G2347 Fragaria x ananassa HOM05D007101 ORTHO05D008632 9.7e-42 176.4 869 61.1
SHI10554 Sapria himalayana HOM05D007101 ORTHO05D008632 2.8e-41 174.9 845 57.9
VMungo0251G1721 Vigna mungo HOM05D007101 ORTHO05D008632 3.7e-41 174.5 102 86.3
Carub.0003s3107 Capsella rubella HOM05D007101 ORTHO05D008632 1.1e-40 172.9 888 59.7
ECA233G4336 Erigeron canadensis HOM05D000046 ORTHO05D014757 1.1e-40 172.9 354 63.8
Rhsim11G0197400 Rhododendron simsii HOM05D007101 ORTHO05D008632 9.4e-37 159.8 415 48.0
Nn1g05331 Nelumbo nucifera HOM05D007101 ORTHO05D008632 1.0e-35 156.4 393 60.3
HanXRQChr12g0374451 Helianthus annuus HOM05D007101 ORTHO05D008632 2.3e-35 155.2 186 43.0
Lsat_1_v5_gn_8_121281 Lactuca sativa HOM05D007101 ORTHO05D008632 8.8e-35 153.3 178 43.8
PSO675G0367 Papaver somniferum HOM05D007101 ORTHO05D008632 2.6e-34 151.8 889 57.4
Os02g0132100 Oryza sativa ssp. japonica HOM05D007101 ORTHO05D008632 9.1e-32 143.3 390 57.4
MD05G1134700 Malus domestica HOM05D007101 ORTHO05D008632 2.2e-30 138.7 246 37.0
Zm00001eb209030 Zea mays HOM05D007101 ORTHO05D008632 5.0e-30 137.5 388 58.2
unitig_32.g11014 Utricularia gibba HOM05D007101 ORTHO05D008632 1.8e-27 129.0 186 37.6
HPP92_025842 Vanilla planifolia HOM05D007101 ORTHO05D008632 1.7e-25 122.5 391 55.5
CDE04G2490 Ceratophyllum demersum HOM05D007101 ORTHO05D008632 2.6e-23 115.2 333 27.0
Sp3g30480 Schrenkiella parvula HOM05D007101 ORTHO05D008632 1.5e-21 109.4 151 39.1
ATR0618G240 Amborella trichopoda HOM05D007101 ORTHO05D008632 1.6e-20 105.9 393 54.5
Gohir.D06G112750 Gossypium hirsutum HOM05D007101 ORTHO05D019476 2.1e-20 105.5 105 72.4
Gorai.008G096400 Gossypium raimondii HOM05D007101 ORTHO05D008632 8.8e-19 100.1 142 40.8
TAR629G1847 Trochodendron aralioides HOM05D007101 ORTHO05D008632 1.0e-14 86.7 157 35.7
MD05G1134600 Malus domestica HOM05D007101 ORTHO05D008632 1.1e-13 83.2 67 59.7
THA.LOC104807397 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 1.4e-11 76.3 113 40.7
QL10p016708 Quercus lobata HOM05D002453 ORTHO05D002107 6.5e-06 57.4 205 24.4
MSTRG.23026 Avicennia marina HOM05D002453 ORTHO05D002107 8.5e-06 57.0 201 24.9
Thecc.05G003500 Theobroma cacao HOM05D008684 ORTHO05D010796 8.5e-06 57.0 65 43.1


User provided reference genes

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