Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 7.1e-59 230.3 112 100.0
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 1.8e-54 215.7 112 92.9
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 4.1e-46 188.0 109 80.7
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 2.2e-39 165.6 104 76.9
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 3.7e-39 164.9 104 76.9
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 1.8e-38 162.5 104 76.0
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 4.1e-38 161.4 108 69.4
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 2.0e-37 159.1 101 73.3
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 3.4e-37 158.3 101 72.3
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 7.7e-37 157.1 104 73.1
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 1.7e-36 156.0 110 68.2
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 2.9e-36 155.2 105 70.5
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 2.9e-36 155.2 113 67.3
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 3.8e-36 154.8 105 69.5
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 5.0e-36 154.5 103 68.0
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 8.5e-36 153.7 101 70.3
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 8.5e-36 153.7 108 65.7
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 1.1e-35 153.3 109 67.0
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 2.5e-35 152.1 102 68.6
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 3.2e-35 151.8 105 68.6
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 3.2e-35 151.8 107 67.3
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 4.2e-35 151.4 101 70.3
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 7.2e-35 150.6 103 66.0
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.2e-34 149.8 103 68.9
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 2.7e-34 148.7 106 65.1
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 2.7e-34 148.7 107 65.4
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 2.7e-34 148.7 106 65.1
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 3.6e-34 148.3 105 67.6
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 4.7e-34 147.9 112 65.2
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 4.7e-34 147.9 103 68.9
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 6.1e-34 147.5 101 68.3
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 6.1e-34 147.5 101 68.3
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 7.9e-34 147.1 102 65.7
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.4e-33 146.4 100 68.0
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.4e-33 146.4 100 68.0
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 1.4e-33 146.4 104 67.3
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 1.8e-33 146.0 104 66.3
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.8e-33 146.0 107 63.6
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 2.3e-33 145.6 107 64.5
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 3.0e-33 145.2 120 62.5
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 3.0e-33 145.2 107 64.5
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 3.0e-33 145.2 105 66.7
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 3.0e-33 145.2 106 63.2
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 8.8e-33 143.7 107 64.5
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 1.1e-32 143.3 107 64.5
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 1.1e-32 143.3 107 62.6
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 1.1e-32 143.3 102 62.7
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.1e-32 143.3 100 66.0
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.1e-32 143.3 100 65.0
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.1e-32 143.3 107 64.5
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 1.5e-32 142.9 101 63.4
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 1.5e-32 142.9 107 63.6
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.3e-32 141.7 100 67.0
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 4.4e-32 141.4 108 61.1
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 9.7e-32 140.2 106 63.2
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 9.7e-32 140.2 100 66.0
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 1.3e-31 139.8 100 61.0
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 1.3e-31 139.8 77 84.4
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 1.7e-31 139.4 107 60.7
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 2.8e-31 138.7 101 65.3
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.8e-31 138.7 100 65.0
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 8.2e-31 137.1 105 61.9
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 2.4e-30 135.6 126 54.0
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 3.1e-30 135.2 107 60.7
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.6e-29 132.1 104 62.5
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.5e-29 131.3 100 63.0
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 5.9e-29 131.0 110 60.0
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 1.0e-28 130.2 106 57.5
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 1.0e-28 130.2 102 57.8
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 1.0e-28 130.2 98 59.2
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 1.3e-28 129.8 98 57.1
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 2.9e-28 128.6 98 58.2
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 6.5e-28 127.5 98 56.1
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 1.1e-27 126.7 110 54.5
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 1.9e-27 125.9 98 56.1
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.5e-27 125.6 91 63.7
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 4.2e-27 124.8 106 55.7
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 9.4e-27 123.6 110 55.5
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 9.4e-27 123.6 95 60.0
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 1.6e-26 122.9 129 48.8
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 1.6e-26 122.9 105 53.3
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 1.6e-26 122.9 104 52.9
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 2.1e-26 122.5 172 41.3
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 6.1e-26 120.9 110 56.4
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 1.0e-25 120.2 82 65.9
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.4e-25 119.8 108 50.9
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.4e-25 119.8 108 50.9
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.8e-25 119.4 95 58.9
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 2.3e-25 119.0 104 55.8
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 5.2e-25 117.9 115 48.7
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 5.2e-25 117.9 115 48.7
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 1.5e-24 116.3 129 46.5
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 1.5e-24 116.3 128 46.9
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 1.5e-24 116.3 142 43.7
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 2.0e-24 115.9 78 65.4
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 2.6e-24 115.5 115 47.0
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 2.6e-24 115.5 106 50.0
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 3.3e-24 115.2 123 47.2
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 4.4e-24 114.8 78 65.4
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 5.7e-24 114.4 78 66.7
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 1.3e-23 113.2 77 67.5
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.2e-23 112.5 77 66.2
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 8.2e-23 110.5 106 52.8
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 8.2e-23 110.5 78 65.4
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.4e-22 109.8 76 65.8
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 1.8e-22 109.4 110 47.3
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 2.4e-22 109.0 105 50.5
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 9.1e-22 107.1 78 62.8
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 1.6e-21 106.3 87 54.0
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 5.9e-21 104.4 93 46.2
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 2.2e-20 102.4 72 65.3
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 1.5e-19 99.8 81 64.2
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 9.4e-19 97.1 66 65.2
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 1.6e-18 96.3 77 53.2
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 2.1e-18 95.9 77 59.7
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 2.7e-18 95.5 68 64.7
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 2.7e-18 95.5 66 60.6
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 4.7e-18 94.7 73 63.0
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 8.8e-17 90.5 73 53.4
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 1.3e-15 86.7 123 40.7
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 2.2e-15 85.9 76 57.9
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 5.3e-14 81.3 85 40.0
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 2.7e-13 79.0 46 71.7
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 2.7e-10 68.9 40 75.0
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 4.0e-09 65.1 50 60.0
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 2.6e-08 62.4 39 69.2


User provided reference genes

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