Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2510.7 1265 100.0
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2437.5 1266 96.9
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2385.9 1266 94.3
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2333.5 1267 91.7
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2321.6 1268 91.0
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2313.5 1267 90.7
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2295.0 1268 90.8
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2260.3 1267 89.4
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2239.5 1267 88.6
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2190.2 1267 84.8
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2183.3 1269 84.7
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2181.4 1267 84.8
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2171.7 1267 84.5
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2169.0 1267 84.5
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2168.7 1268 83.9
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2165.6 1267 84.3
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2159.0 1270 83.5
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2158.3 1270 83.6
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2156.7 1270 83.5
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2155.9 1262 84.0
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2152.9 1265 83.6
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2150.9 1267 83.7
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2145.9 1262 83.8
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2143.2 1270 83.2
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2142.5 1267 83.6
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2142.5 1262 83.6
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2141.3 1268 82.4
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2140.9 1268 83.3
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2140.5 1267 83.1
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2137.8 1267 82.9
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2135.1 1267 83.0
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2134.8 1270 83.2
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2134.8 1268 82.7
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2134.4 1270 82.7
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2133.2 1268 82.6
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2132.1 1267 83.8
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2130.9 1270 81.7
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2130.5 1270 82.1
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2129.4 1270 82.8
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2129.0 1270 82.3
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2126.7 1263 83.1
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2124.4 1267 82.5
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2122.4 1270 82.8
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2122.1 1267 82.4
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2121.7 1267 82.4
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2121.7 1270 83.0
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2120.5 1267 81.6
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2120.1 1267 82.4
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2119.0 1267 82.4
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2117.4 1276 82.4
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2116.3 1270 82.8
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2116.3 1267 82.2
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2115.1 1270 81.2
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2114.3 1270 82.6
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2114.3 1268 81.5
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2112.8 1266 81.4
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2108.2 1270 81.8
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2107.8 1268 81.3
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2106.6 1270 80.7
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2105.1 1270 80.8
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2104.7 1265 81.7
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2104.3 1262 82.9
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2103.9 1270 80.9
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2102.8 1271 80.6
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2102.4 1266 81.5
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2100.1 1271 80.5
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2099.3 1270 80.6
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2098.9 1270 80.6
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2098.9 1266 81.6
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2098.2 1239 83.5
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2095.9 1269 81.5
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2095.1 1266 80.7
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2095.1 1266 81.4
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2092.0 1267 80.7
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2091.2 1267 81.9
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2088.5 1270 82.0
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2087.8 1269 81.2
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2085.8 1249 82.1
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2074.7 1270 79.8
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2070.0 1266 79.9
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2067.0 1268 80.8
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2065.4 1249 81.0
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2053.9 1266 79.5
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2050.8 1261 79.9
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2047.3 1208 83.6
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2046.9 1272 79.2
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2041.2 1271 79.8
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2022.7 1267 79.2
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2016.9 1264 79.0
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2013.8 1264 78.0
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2004.6 1269 78.8
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 1983.4 1267 77.7
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1968.7 1085 90.7
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1941.0 1268 76.4
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1933.7 1268 74.4
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1911.0 1266 75.0
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1898.6 1161 81.2
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1872.8 1272 73.7
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1843.2 1278 71.6
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1818.5 1192 76.5
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1812.3 1267 71.8
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1810.4 1245 72.7
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1786.9 1072 80.7
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1760.0 962 90.3
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1743.0 1122 78.2
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1742.2 1272 70.8
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1729.9 1268 69.8
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1527.7 1322 60.4
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1523.8 1047 72.4
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1356.7 1031 72.9
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1340.1 813 81.5
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1333.5 1262 58.6
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1298.5 1324 52.9
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1280.0 1387 52.1
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1204.9 725 81.4
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1094.7 809 69.6
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 4.0e-259 899.0 1241 41.5
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 6.7e-254 881.7 502 86.1
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 1.1e-253 880.9 570 77.0
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 8.8e-222 775.0 650 61.1
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 9.7e-213 745.0 524 73.1
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 4.7e-191 672.9 455 76.0
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.5e-184 651.4 389 84.3
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 1.9e-123 448.4 359 64.9
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 4.6e-114 417.2 270 81.1
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 8.8e-113 412.9 313 70.6
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 1.3e-76 292.7 479 40.7
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 7.0e-70 270.4 170 78.8
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 5.0e-68 264.2 170 77.6
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.9e-67 262.3 170 77.1
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 6.4e-63 247.3 138 89.1
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 2.1e-58 232.3 234 55.6
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 9.5e-51 206.8 117 82.1
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.5e-40 172.9 147 64.6
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.9e-38 166.0 91 84.6
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 1.7e-36 159.5 182 52.7
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 9.0e-33 147.1 101 64.4
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.4e-25 123.2 104 60.6


User provided reference genes

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