Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G211100 Phaseolus vulgaris HOM05D007310 ORTHO05D002375 1.8e-98 362.8 216 100.0
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 1.9e-76 289.7 246 72.4
Glyma.08G070200 Glycine max HOM05D007310 ORTHO05D002375 2.3e-66 256.1 234 72.6
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 1.3e-64 250.4 216 72.2
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 1.3e-53 213.8 214 62.1
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 2.3e-53 213.0 215 54.4
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 2.3e-50 203.0 215 59.1
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 4.9e-48 195.3 216 59.7
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 2.1e-46 189.9 216 60.6
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 4.6e-46 188.7 216 60.2
Lj4g0014623 Lotus japonicus HOM05D007310 ORTHO05D002375 7.8e-46 188.0 216 60.2
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 3.1e-42 176.0 215 53.0
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 1.1e-26 124.4 210 46.7
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 1.2e-25 120.9 185 48.1
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 4.5e-25 119.0 216 44.0
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 6.4e-24 115.2 161 49.7
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 1.1e-23 114.4 165 49.7
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 1.9e-23 113.6 166 47.6
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 3.2e-23 112.8 162 49.4
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 5.5e-23 112.1 165 49.7
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 7.9e-22 108.2 218 40.4
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 1.8e-21 107.1 173 46.2
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 2.3e-21 106.7 138 55.8
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 1.9e-20 103.6 214 43.0
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 9.6e-20 101.3 148 52.0
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 1.8e-18 97.1 129 57.4
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 2.4e-18 96.7 164 45.7
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 3.1e-18 96.3 139 41.7
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 3.1e-18 96.3 139 41.7
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 4.0e-18 95.9 145 36.6
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 4.0e-18 95.9 162 46.9
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 5.3e-18 95.5 117 57.3
THA.LOC104804411 Tarenaya hassleriana HOM05D007310 ORTHO05D002375 5.3e-18 95.5 124 58.1
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 1.2e-17 94.4 123 41.5
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 1.5e-17 94.0 125 41.6
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 3.4e-17 92.8 141 48.2
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 3.4e-17 92.8 180 39.4
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 4.5e-17 92.4 199 38.7
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 5.8e-17 92.0 150 45.3
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 5.8e-17 92.0 154 46.8
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 7.6e-17 91.7 131 51.1
Sabra17G0036600 Salix brachista HOM05D007310 ORTHO05D002375 1.0e-16 91.3 96 55.2
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 1.0e-16 91.3 189 33.3
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 2.2e-16 90.1 174 37.4
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 2.9e-16 89.7 132 43.9
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 2.9e-16 89.7 175 37.1
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 4.9e-16 89.0 120 50.0
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 6.5e-16 88.6 198 34.3
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 8.4e-16 88.2 127 54.3
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 8.4e-16 88.2 143 46.9
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 1.1e-15 87.8 123 51.2
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 1.1e-15 87.8 160 39.4
Sp3g27450 Schrenkiella parvula HOM05D007310 ORTHO05D002375 1.1e-15 87.8 147 46.3
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 1.4e-15 87.4 152 43.4
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 2.5e-15 86.7 157 37.6
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 2.5e-15 86.7 143 32.2
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 3.2e-15 86.3 119 51.3
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 3.2e-15 86.3 168 37.5
BcaB08g34551 Brassica carinata HOM05D007310 ORTHO05D002375 5.5e-15 85.5 157 43.3
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 5.5e-15 85.5 119 49.6
FAN15G0442 Fragaria x ananassa HOM05D007310 ORTHO05D002375 5.5e-15 85.5 162 47.5
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 1.2e-14 84.3 206 34.0
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 1.2e-14 84.3 141 39.0
Sabra17G0042000 Salix brachista HOM05D007310 ORTHO05D002375 1.2e-14 84.3 96 50.0
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 2.1e-14 83.6 118 50.0
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 3.5e-14 82.8 140 32.1
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 4.6e-14 82.4 125 46.4
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 6.0e-14 82.0 128 55.5
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 7.9e-14 81.6 161 33.5
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 1.3e-13 80.9 161 33.5
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 1.1e-12 77.8 119 32.8
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 1.9e-12 77.0 159 44.0
Gohir.D02G199400 Gossypium hirsutum HOM05D007310 ORTHO05D002375 5.7e-12 75.5 111 51.4
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 9.6e-12 74.7 146 43.8
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 9.6e-12 74.7 140 42.1
MELO3C018616.2 Cucumis melo HOM05D007310 ORTHO05D002375 1.3e-11 74.3 126 50.0
Sc08g0003780 Simmondsia chinensis HOM05D007310 ORTHO05D002375 1.3e-11 74.3 211 37.4
ClCG09G015950 Citrullus lanatus HOM05D007310 ORTHO05D002375 3.7e-11 72.8 118 52.5
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 3.7e-11 72.8 137 32.1
CSS0024408 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 6.3e-11 72.0 101 60.4
CSS0048944 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 6.3e-11 72.0 62 58.1
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 6.3e-11 72.0 121 46.3
CsaV3_7G006790 Cucumis sativus L. HOM05D007310 ORTHO05D002375 1.8e-10 70.5 101 59.4
HPP92_019302 Vanilla planifolia HOM05D007310 ORTHO05D002375 2.4e-10 70.1 158 40.5
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 4.1e-10 69.3 112 48.2
BcaC01g03103 Brassica carinata HOM05D007310 ORTHO05D002375 9.0e-10 68.2 170 33.5
Atru.chr6.1218 Acer truncatum HOM05D007310 ORTHO05D002375 1.5e-09 67.4 65 55.4
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 1.5e-09 67.4 148 41.2
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 5.9e-09 65.5 117 47.0
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 5.9e-09 65.5 140 39.3
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 7.6e-09 65.1 104 47.1
Sed0021578 Sechium edule HOM05D007310 ORTHO05D002375 7.6e-09 65.1 110 51.8
Aa31LG8G12500 Aethionema arabicum HOM05D007310 ORTHO05D002375 1.0e-08 64.7 123 34.1
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 1.3e-08 64.3 98 34.7
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 1.7e-08 63.9 118 45.8
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 2.2e-08 63.5 114 46.5
C03p56020 Brassica napus HOM05D007310 ORTHO05D002375 2.9e-08 63.2 171 33.9
BolC3t17888H Brassica oleracea HOM05D007310 ORTHO05D002375 2.9e-08 63.2 171 33.9
Gorai.005G224000 Gossypium raimondii HOM05D007310 ORTHO05D002375 5.0e-08 62.4 152 39.5
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 8.5e-08 61.6 161 38.5
ATR0684G111 Amborella trichopoda HOM05D007310 ORTHO05D002375 1.1e-07 61.2 88 58.0
A03p45150 Brassica napus HOM05D007310 ORTHO05D002375 1.1e-07 61.2 170 34.1
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 1.1e-07 61.2 109 41.3
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.4e-07 60.8 101 48.5
BraA03t13650Z Brassica rapa HOM05D007310 ORTHO05D002375 1.9e-07 60.5 170 32.9
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 2.5e-07 60.1 114 40.4
Lsat_1_v5_gn_1_2840 Lactuca sativa HOM05D004728 ORTHO05D002375 5.5e-07 58.9 117 42.7
Duzib132G0922 Durio zibethinus HOM05D007310 ORTHO05D002375 7.2e-07 58.5 105 34.3
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 7.2e-07 58.5 150 37.3
Actinidia10351 Actinidia chinensis HOM05D007310 ORTHO05D002375 9.3e-07 58.2 126 50.0
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 9.3e-07 58.2 161 38.5
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.2e-06 57.8 150 36.7
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 1.2e-06 57.8 158 35.4
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 1.2e-06 57.8 120 35.0
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.6e-06 57.4 116 42.2
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.6e-06 57.4 106 45.3
Zm00001eb027840 Zea mays HOM05D007310 ORTHO05D002375 2.1e-06 57.0 95 44.2
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.6e-06 56.2 114 37.7
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 4.6e-06 55.8 179 33.0
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 6.1e-06 55.5 109 38.5
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 6.1e-06 55.5 109 38.5


User provided reference genes

Program Settings