Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 3.3e-70 268.5 157 100.0
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 1.2e-67 260.0 155 94.8
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 9.3e-65 250.4 153 94.8
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 4.6e-64 248.1 153 90.8
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 1.0e-55 220.3 151 81.5
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.0e-55 220.3 151 81.5
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 2.3e-55 219.2 144 85.4
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 3.0e-55 218.8 144 84.7
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 5.7e-54 214.5 150 78.0
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 7.4e-54 214.2 151 80.8
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 4.8e-53 211.5 154 80.5
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 6.3e-53 211.1 152 77.6
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 4.5e-51 204.9 152 73.7
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 5.9e-51 204.5 145 78.6
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 7.7e-51 204.1 145 78.6
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 7.7e-51 204.1 144 77.1
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 1.0e-50 203.8 154 76.0
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 2.2e-50 202.6 151 74.8
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 2.9e-50 202.2 144 77.1
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 2.9e-50 202.2 152 74.3
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 3.8e-50 201.8 151 73.5
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 6.5e-50 201.1 154 72.7
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 6.5e-50 201.1 153 75.2
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.1e-49 200.3 151 74.2
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 3.2e-49 198.7 148 75.0
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 4.2e-49 198.4 151 73.5
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 4.2e-49 198.4 151 72.8
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 4.2e-49 198.4 172 69.8
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 5.5e-49 198.0 153 71.9
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 1.2e-48 196.8 152 73.7
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 1.6e-48 196.4 150 74.0
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 2.7e-48 195.7 145 75.2
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 2.7e-48 195.7 148 71.6
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 2.7e-48 195.7 149 73.2
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.7e-48 195.7 149 73.2
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 2.7e-48 195.7 154 71.4
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 4.6e-48 194.9 149 73.2
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 4.6e-48 194.9 154 72.1
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 6.1e-48 194.5 148 71.6
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 6.1e-48 194.5 151 72.2
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 6.1e-48 194.5 154 72.7
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 6.1e-48 194.5 150 72.0
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 7.9e-48 194.1 146 74.0
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 1.0e-47 193.7 150 74.7
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.0e-47 193.7 150 71.3
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.0e-47 193.7 150 71.3
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 1.0e-47 193.7 149 69.8
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.4e-47 193.4 149 72.5
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.4e-47 193.4 149 72.5
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 1.4e-47 193.4 146 71.9
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.4e-47 193.4 151 72.2
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.8e-47 193.0 145 71.0
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 2.3e-47 192.6 153 71.2
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 3.0e-47 192.2 145 71.7
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 3.0e-47 192.2 145 71.7
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 3.9e-47 191.8 146 70.5
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.9e-47 191.8 149 71.8
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 6.7e-47 191.0 145 71.0
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 6.7e-47 191.0 151 71.5
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 6.7e-47 191.0 154 70.8
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 6.7e-47 191.0 142 73.2
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 8.8e-47 190.7 145 70.3
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 8.8e-47 190.7 145 70.3
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 8.8e-47 190.7 145 70.3
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 1.1e-46 190.3 149 71.1
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 1.5e-46 189.9 151 69.5
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 1.5e-46 189.9 143 72.0
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 2.0e-46 189.5 145 70.3
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 2.0e-46 189.5 145 70.3
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 2.6e-46 189.1 145 69.7
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 4.4e-46 188.3 145 69.0
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 4.4e-46 188.3 145 70.3
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 4.4e-46 188.3 145 70.3
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 4.4e-46 188.3 145 69.7
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 5.7e-46 188.0 149 68.5
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 7.4e-46 187.6 146 69.9
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 7.4e-46 187.6 155 70.3
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 9.7e-46 187.2 142 71.1
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 2.2e-45 186.0 146 70.5
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 2.2e-45 186.0 146 70.5
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 2.4e-44 182.6 145 68.3
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 2.4e-44 182.6 155 70.3
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 5.3e-44 181.4 147 68.7
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 1.5e-43 179.9 131 76.3
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 7.7e-43 177.6 147 66.7
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 2.9e-42 175.6 143 66.4
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 6.5e-42 174.5 149 65.1
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 1.6e-40 169.9 150 68.7
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 4.7e-40 168.3 155 65.8
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 1.4e-39 166.8 145 66.9
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 1.8e-39 166.4 150 66.7
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 6.7e-39 164.5 144 63.9
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 2.0e-38 162.9 149 63.8
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 4.8e-37 158.3 148 64.9
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 2.4e-36 156.0 148 64.9
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 4.1e-36 155.2 142 57.7
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 7.7e-35 151.0 147 63.3
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 2.2e-34 149.4 211 47.9
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 2.9e-34 149.1 114 72.8
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 5.0e-34 148.3 113 75.2
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.5e-33 146.0 145 64.1
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 1.0e-31 140.6 129 65.9
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.0e-31 138.7 141 59.6
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 6.7e-31 137.9 175 56.0
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 2.0e-30 136.3 156 59.6
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 2.8e-29 132.5 145 60.7
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 3.7e-29 132.1 146 58.2
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 1.1e-28 130.6 114 64.0
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 1.8e-28 129.8 136 50.0
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 1.8e-28 129.8 136 48.5
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 2.4e-28 129.4 107 68.2
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 1.6e-27 126.7 112 59.8
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 1.3e-26 123.6 153 57.5
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 2.2e-26 122.9 119 60.5
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 5.0e-26 121.7 110 60.9
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 6.5e-26 121.3 108 63.0
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 9.4e-25 117.5 92 72.8
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 9.4e-25 117.5 145 55.2
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 9.4e-25 117.5 145 55.2
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 4.7e-24 115.2 136 44.1
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.3e-21 107.1 81 76.5
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 1.4e-20 103.6 126 57.1
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 1.2e-16 90.5 50 92.0
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 9.8e-14 80.9 66 68.2
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 5.4e-12 75.1 45 86.7
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 7.8e-11 71.2 142 38.0
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 2.1e-08 63.2 47 66.0
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 8.0e-08 61.2 133 36.1
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 6.8e-07 58.2 128 39.1


User provided reference genes

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