Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 3.6e-293 1010.7 484 100.0
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 5.6e-278 960.3 509 91.0
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 1.1e-273 946.0 484 93.4
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 3.5e-272 941.0 484 92.1
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 1.3e-258 896.0 484 87.2
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 1.7e-258 895.6 484 87.0
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 9.4e-249 863.2 485 85.4
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 1.6e-248 862.4 485 85.2
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 5.7e-246 854.0 484 83.1
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 3.7e-245 851.3 484 83.7
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 2.9e-242 841.6 488 82.6
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 5.0e-242 840.9 486 81.7
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 5.0e-242 840.9 487 81.9
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 4.7e-240 834.3 488 80.1
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 1.0e-239 833.2 484 81.8
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 6.7e-239 830.5 487 81.1
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 3.3e-238 828.2 487 81.1
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 3.3e-238 828.2 484 80.4
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 7.4e-238 827.0 495 78.8
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 7.4e-238 827.0 484 80.6
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 9.7e-238 826.6 486 80.9
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 1.3e-237 826.2 495 78.8
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 1.7e-237 825.9 484 80.4
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.8e-237 825.1 484 80.4
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.4e-236 822.8 484 80.0
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 2.4e-236 822.0 486 79.6
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 3.1e-236 821.6 485 80.4
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 7.0e-236 820.5 487 79.7
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 3.5e-235 818.1 485 80.2
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 5.9e-235 817.4 484 79.5
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 1.0e-234 816.6 484 78.9
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.0e-234 816.6 484 79.8
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 6.5e-234 813.9 484 79.3
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 8.5e-234 813.5 484 80.0
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 8.5e-234 813.5 484 79.3
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.5e-233 812.8 487 79.3
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.9e-233 812.4 485 79.8
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 2.5e-233 812.0 484 79.1
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 9.4e-233 810.1 484 78.1
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 9.4e-233 810.1 491 78.2
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 2.7e-232 808.5 499 78.2
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 3.6e-232 808.1 485 78.4
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 1.4e-231 806.2 491 78.0
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 4.0e-231 804.7 484 78.1
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 4.0e-231 804.7 491 77.2
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 1.2e-230 803.1 484 77.7
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 3.3e-230 801.6 484 77.9
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 3.3e-230 801.6 491 77.6
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 5.7e-230 800.8 484 78.9
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 5.7e-230 800.8 487 77.0
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 5.7e-230 800.8 520 74.2
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 1.7e-229 799.3 484 76.9
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 1.4e-228 796.2 484 77.3
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 1.2e-227 793.1 484 78.5
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 5.9e-227 790.8 485 78.1
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 7.7e-227 790.4 472 79.2
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 1.7e-226 789.3 485 79.4
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 2.5e-225 785.4 486 75.5
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 9.4e-225 783.5 484 75.8
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.4e-223 779.6 460 80.4
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 1.4e-223 779.6 579 67.0
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 2.3e-223 778.9 484 76.4
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 6.8e-223 777.3 491 75.2
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 8.8e-223 776.9 484 75.4
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 2.6e-222 775.4 485 76.3
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 7.5e-222 773.9 486 74.9
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 7.5e-222 773.9 484 75.4
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 2.8e-221 771.9 484 75.4
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 2.8e-221 771.9 484 75.0
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 2.8e-221 771.9 572 67.7
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 3.7e-221 771.5 485 75.5
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 8.3e-221 770.4 484 74.8
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 7.0e-220 767.3 484 75.0
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 7.0e-220 767.3 489 74.8
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 9.1e-220 766.9 485 74.4
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 1.2e-219 766.5 484 75.0
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 4.5e-219 764.6 484 73.8
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 4.5e-219 764.6 484 74.4
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 5.9e-219 764.2 484 73.8
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 7.7e-219 763.8 490 74.3
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 1.0e-218 763.5 484 73.1
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 3.8e-218 761.5 484 73.3
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 5.0e-218 761.1 484 73.6
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.0e-218 761.1 458 78.8
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 8.6e-218 760.4 484 74.6
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 1.1e-217 760.0 484 73.3
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 1.1e-217 760.0 484 73.3
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 1.9e-217 759.2 474 76.4
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 2.1e-216 755.7 484 72.9
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 5.2e-215 751.1 508 70.3
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 2.0e-214 749.2 568 65.5
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 9.8e-214 746.9 484 74.2
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 1.3e-213 746.5 488 72.7
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 3.1e-212 741.9 484 72.7
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 2.7e-211 738.8 487 71.7
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 1.0e-207 726.9 484 73.6
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 8.9e-207 723.8 411 81.5
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 3.7e-205 718.4 415 81.9
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 5.4e-204 714.5 541 65.1
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 2.7e-203 712.2 508 68.1
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 1.0e-202 710.3 493 69.2
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 9.5e-201 703.7 484 69.6
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 2.1e-200 702.6 573 62.0
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 1.7e-197 693.0 598 59.4
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 4.4e-190 668.3 452 72.3
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 1.9e-188 662.9 411 75.4
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 2.3e-186 656.0 431 71.5
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 1.2e-182 643.7 489 63.6
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.2e-182 643.7 374 80.2
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 9.9e-182 640.6 496 60.3
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 2.1e-179 632.9 489 62.0
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 4.3e-177 625.2 360 80.6
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 2.1e-176 622.9 342 85.7
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 2.9e-173 612.5 373 74.8
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 1.6e-171 606.7 373 74.3
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 9.9e-166 587.4 327 84.1
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 3.8e-165 585.5 327 83.8
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.4e-164 583.6 327 83.5
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 1.9e-161 573.2 530 54.5
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 4.8e-152 542.0 333 77.5
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 6.2e-152 541.6 325 78.5
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 9.0e-151 537.7 360 71.4
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 4.2e-148 528.9 328 77.7
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 2.2e-144 516.5 351 70.4
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 1.3e-136 490.7 327 72.8
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.1e-135 485.7 300 76.3
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.5e-105 385.2 222 80.6
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 2.2e-104 383.6 480 43.1
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 7.0e-103 378.6 379 49.1
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 4.5e-102 375.9 211 86.3
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 1.3e-93 347.8 435 44.4
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 6.4e-88 328.9 187 85.6
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 1.6e-86 324.3 232 65.1
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.7e-77 294.3 159 86.2
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.7e-77 294.3 159 86.2
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 8.1e-75 285.4 159 84.9
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 4.7e-67 259.6 145 80.7
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 9.9e-57 225.3 442 33.9
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.2e-48 197.6 106 86.8
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.9e-46 189.1 106 84.9
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.3e-43 181.8 94 90.4
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.8e-43 179.9 93 90.3
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 2.6e-41 174.1 143 58.7
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 3.2e-39 167.2 119 70.6
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 6.9e-34 149.4 91 73.6
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 3.2e-23 114.0 67 77.6
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 4.2e-23 113.6 76 75.0
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 1.4e-18 98.6 70 70.0
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.8e-18 98.2 65 66.2
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 5.3e-18 96.7 87 55.2
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 1.4e-15 88.6 69 62.3
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 8.2e-11 72.8 122 39.3
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 2.7e-06 57.8 125 34.4


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