Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G203800 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 2.8e-34 147.9 67 100.0
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 4.8e-18 94.0 43 97.7
Ca_03784_v3 Cicer arietinum L. HOM05D001966 ORTHO05D010449 1.8e-17 92.0 43 95.3
Hma1.2p1_0642F.1_g194360 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 1.8e-17 92.0 43 93.0
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 3.1e-17 91.3 43 95.3
arahy.Tifrunner.gnm1.ann1.818UAU Arachis hypogaea HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
BraSC138t45527Z Brassica rapa HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
BraSC25t45919Z Brassica rapa HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
BraSC59t46542Z Brassica rapa HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
Cpa.g.c43052.2 Carica papaya HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
Gohir.A05G323716 Gossypium hirsutum HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
Gohir.A09G102700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
Nn029s41585 Nelumbo nucifera HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
Nn064s42222 Nelumbo nucifera HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
Nn212s45202 Nelumbo nucifera HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
Nn264s45946 Nelumbo nucifera HOM05D001966 ORTHO05D010449 3.1e-17 91.3 43 95.3
SHI36541 Sapria himalayana HOM05D001966 ORTHO05D010449 6.9e-17 90.1 46 89.1
Cpa.g.c38922 Carica papaya HOM05D001966 ORTHO05D010449 9.0e-17 89.7 43 93.0
Nn8g40933 Nelumbo nucifera HOM05D001966 ORTHO05D010449 2.0e-16 88.6 43 93.0
Phvul.006G154100 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 2.0e-16 88.6 43 93.0
Potri.011G074100 Populus trichocarpa HOM05D001966 ORTHO05D010449 3.4e-16 87.8 43 90.7
Gohir.A10G065960 Gossypium hirsutum HOM05D001966 ORTHO05D010449 5.8e-16 87.0 43 93.0
TPR.G18587 Trifolium pratense HOM05D001966 ORTHO05D010449 5.8e-16 87.0 42 88.1
Lj3g0016717 Lotus japonicus HOM05D001966 ORTHO05D010449 7.6e-16 86.7 43 93.0
EL10Ac8g19703 Beta vulgaris HOM05D001966 ORTHO05D010449 3.8e-15 84.3 57 70.2
Gohir.A09G034500 Gossypium hirsutum HOM05D001966 ORTHO05D010449 4.9e-15 84.0 43 90.7
arahy.Tifrunner.gnm1.ann1.A6TYH4 Arachis hypogaea HOM05D001966 ORTHO05D010449 8.4e-15 83.2 38 94.7
arahy.Tifrunner.gnm1.ann1.EPN6WV Arachis hypogaea HOM05D001966 ORTHO05D010449 8.4e-15 83.2 38 94.7
FAN06G1313 Fragaria x ananassa HOM05D001966 ORTHO05D010449 1.1e-14 82.8 43 88.4
Gohir.D09G072950 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.1e-14 82.8 41 87.8
Hma1.2p1_0236F.1_g099130 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 1.4e-14 82.4 43 86.0
Gohir.D12G084201 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.9e-14 82.0 43 88.4
arahy.Tifrunner.gnm1.ann1.11UFCR Arachis hypogaea HOM05D001966 ORTHO05D010449 2.4e-14 81.6 41 87.8
Gohir.A02G069600 Gossypium hirsutum HOM05D001966 ORTHO05D010449 7.1e-14 80.1 43 86.0
Gohir.D02G173601 Gossypium hirsutum HOM05D001966 ORTHO05D010449 9.3e-14 79.7 42 88.1
Gohir.A06G105700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.1e-13 78.6 41 85.4
Gorai.008G094200 Gossypium raimondii HOM05D001966 ORTHO05D010449 4.6e-13 77.4 41 85.4
Glyma.08G269900 Glycine max HOM05D001966 ORTHO05D010449 1.0e-12 76.3 43 79.1
A02p28440 Brassica napus HOM05D001966 ORTHO05D010449 5.1e-12 73.9 40 77.5
BraA02t07879Z Brassica rapa HOM05D001966 ORTHO05D010449 5.1e-12 73.9 40 77.5
SHI23682 Sapria himalayana HOM05D001966 ORTHO05D010449 1.3e-10 69.3 31 93.5
Lj4g0021959 Lotus japonicus HOM05D008259 ORTHO05D010449 2.1e-10 68.6 32 90.6
arahy.Tifrunner.gnm1.ann1.PU3CYV Arachis hypogaea HOM05D001966 ORTHO05D010449 1.4e-09 65.9 38 76.3
Gorai.006G234500 Gossypium raimondii HOM05D001966 ORTHO05D010449 1.4e-09 65.9 35 82.9
BraSC143t45650Z Brassica rapa HOM05D001966 ORTHO05D010449 1.2e-08 62.8 33 84.8
BraSC58t46454Z Brassica rapa HOM05D001966 ORTHO05D010449 1.5e-08 62.4 35 77.1
Aqoxy4G03063 Aquilegia oxysepala HOM05D000710 ORTHO05D010449 1.0e-07 59.7 36 75.0
EL10As15g24132 Beta vulgaris HOM05D008259 ORTHO05D010449 1.1e-06 56.2 25 96.0
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.1e-06 56.2 25 96.0
FAN26G2239 Fragaria x ananassa HOM05D004182 ORTHO05D010449 1.1e-06 56.2 25 96.0
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 1.1e-06 56.2 25 96.0
DCAR_029424 Daucus carota HOM05D001966 ORTHO05D010449 1.4e-06 55.8 38 65.8
Gorai.007G250500 Gossypium raimondii HOM05D001966 ORTHO05D010449 7.1e-06 53.5 29 79.3


User provided reference genes

Program Settings