Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G203700 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 6.6e-44 180.3 88 100.0
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 4.8e-26 120.9 57 100.0
arahy.Tifrunner.gnm1.ann1.UQV5ZS Arachis hypogaea HOM05D001966 ORTHO05D007227 6.9e-25 117.1 66 84.8
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-24 116.3 56 96.4
arahy.Tifrunner.gnm1.ann1.Z8IK0I Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-24 116.3 56 96.4
Sed0012652 Sechium edule HOM05D001966 ORTHO05D007227 1.2e-24 116.3 56 96.4
Sopen06g012240 Solanum pennellii HOM05D000014 ORTHO05D000016 3.4e-24 114.8 54 100.0
arahy.Tifrunner.gnm1.ann1.KZKE62 Arachis hypogaea HOM05D001966 ORTHO05D007227 5.8e-24 114.0 78 78.2
arahy.Tifrunner.gnm1.ann1.FN7561 Arachis hypogaea HOM05D001966 ORTHO05D007227 7.6e-24 113.6 78 78.2
LjContig00489g0013211 Lotus japonicus HOM05D001966 ORTHO05D007227 1.0e-23 113.2 78 76.9
VMungo1127G1224 Vigna mungo HOM05D001966 ORTHO05D007227 1.0e-23 113.2 56 96.4
arahy.Tifrunner.gnm1.ann1.3I0RGA Arachis hypogaea HOM05D001966 ORTHO05D007227 6.5e-23 110.5 56 89.3
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 1.9e-22 109.0 78 75.6
Gohir.1Z049882 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.9e-22 109.0 56 91.1
Gohir.A04G039270 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.9e-22 109.0 56 91.1
Gohir.A05G323724 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.9e-22 109.0 56 91.1
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 3.2e-22 108.2 55 92.7
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 3.2e-22 108.2 55 92.7
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 7.1e-22 107.1 55 90.9
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 7.1e-22 107.1 55 90.9
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 7.1e-22 107.1 55 90.9
arahy.Tifrunner.gnm1.ann1.HASF1T Arachis hypogaea HOM05D001966 ORTHO05D007227 9.3e-22 106.7 56 89.3
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 9.3e-22 106.7 50 96.0
BcaC04g22012 Brassica carinata HOM05D001966 ORTHO05D007227 2.7e-21 105.1 78 69.2
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 6.1e-21 104.0 54 90.7
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 7.9e-21 103.6 51 94.1
HPP92_028396 Vanilla planifolia HOM05D001966 ORTHO05D007227 2.3e-20 102.1 78 73.1
HPP92_028404 Vanilla planifolia HOM05D001966 ORTHO05D007227 2.3e-20 102.1 78 73.1
HPP92_028413 Vanilla planifolia HOM05D001966 ORTHO05D007227 2.3e-20 102.1 78 73.1
HPP92_028421 Vanilla planifolia HOM05D001966 ORTHO05D007227 2.3e-20 102.1 78 73.1
HPP92_028428 Vanilla planifolia HOM05D001966 ORTHO05D007227 2.3e-20 102.1 78 73.1
HPP92_028434 Vanilla planifolia HOM05D001966 ORTHO05D007227 2.3e-20 102.1 78 73.1
Migut.B00950 Erythranthe guttata HOM05D001966 ORTHO05D007227 6.7e-20 100.5 49 98.0
MD15G1346300 Malus domestica HOM05D001966 ORTHO05D007227 5.7e-19 97.4 53 92.5
Sed0014217 Sechium edule HOM05D001966 ORTHO05D007227 1.3e-18 96.3 68 73.5
Gohir.D02G016950 Gossypium hirsutum HOM05D001966 ORTHO05D007227 4.8e-18 94.4 56 80.4
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 1.4e-17 92.8 61 75.4
BraSC58t46466Z Brassica rapa HOM05D001966 ORTHO05D007227 2.0e-16 89.0 45 95.6
Phvul.003G142600 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 5.9e-16 87.4 52 80.8
Gorai.005G020800 Gossypium raimondii HOM05D001966 ORTHO05D007227 1.3e-15 86.3 56 71.4
Gohir.A09G039165 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.9e-14 82.4 75 58.7
Peaxi162Scf00383g00065 Petunia axillaris HOM05D001966 ORTHO05D007227 2.5e-14 82.0 42 92.9
Gorai.006G045900 Gossypium raimondii HOM05D001966 ORTHO05D007227 1.2e-13 79.7 75 56.0
arahy.Tifrunner.gnm1.ann1.DHX5K3 Arachis hypogaea HOM05D001966 ORTHO05D007227 3.9e-12 74.7 47 76.6
Sed0001460 Sechium edule HOM05D001966 ORTHO05D007227 3.9e-12 74.7 42 83.3
arahy.Tifrunner.gnm1.ann1.WHCD0B Arachis hypogaea HOM05D001966 ORTHO05D007227 1.4e-09 66.2 35 85.7
EL10Ac8g19704 Beta vulgaris HOM05D001966 ORTHO05D007227 9.1e-09 63.5 28 96.4
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.5e-08 62.8 66 56.1
Gohir.D12G091540 Gossypium hirsutum HOM05D001070 ORTHO05D010233 3.4e-08 61.6 66 54.5
arahy.Tifrunner.gnm1.ann1.MZV923 Arachis hypogaea HOM05D001966 ORTHO05D007227 5.9e-08 60.8 30 90.0
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 1.0e-07 60.1 34 85.3
Cpa.g.sc61.38 Carica papaya HOM05D001966 ORTHO05D007227 6.5e-07 57.4 31 83.9
Nitab4.5_0003065g0030 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.1e-06 56.6 24 95.8
ClCG04G004710 Citrullus lanatus HOM05D001966 ORTHO05D007429 1.9e-06 55.8 60 55.0
arahy.Tifrunner.gnm1.ann1.XERY24 Arachis hypogaea HOM05D001966 ORTHO05D007227 5.5e-06 54.3 26 88.5


User provided reference genes

Program Settings