Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G203100 Phaseolus vulgaris HOM05D000002 ORTHO05D000001 2.7e-55 218.4 108 100.0
VMungo0720G0519 Vigna mungo HOM05D000042 ORTHO05D000001 5.3e-11 71.2 69 44.9
Atru.chr10.264 Acer truncatum HOM05D000002 ORTHO05D000001 1.2e-10 70.1 82 41.5
CANSAT25G2785 Cannabis sativa HOM05D000002 ORTHO05D000001 3.8e-09 65.1 113 31.9
arahy.Tifrunner.gnm1.ann1.79VNNQ Arachis hypogaea HOM05D005648 ORTHO05D007357 1.1e-08 63.5 79 35.4
Sabra14G0114400 Salix brachista HOM05D000002 ORTHO05D000001 1.1e-08 63.5 98 33.7
GSVIVG01034817001 Vitis vinifera HOM05D000080 ORTHO05D000053 1.1e-08 63.5 78 39.7
Ciclev10003509m.g Citrus clementina HOM05D000002 ORTHO05D000001 2.5e-08 62.4 110 36.4
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 2.5e-08 62.4 92 38.0
PSO423G0202 Papaver somniferum HOM05D000973 ORTHO05D000001 2.5e-08 62.4 89 34.8
TAR192G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.2e-08 62.0 110 40.0
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 7.2e-08 60.8 89 36.0
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.2e-08 60.8 79 36.7
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.4e-08 60.5 77 46.8
HanXRQChr17g0541481 Helianthus annuus HOM05D000002 ORTHO05D000001 9.4e-08 60.5 79 41.8
PSO040G0055 Papaver somniferum HOM05D000973 ORTHO05D000001 9.4e-08 60.5 89 34.8
Sabra15G0130700 Salix brachista HOM05D000432 ORTHO05D000001 9.4e-08 60.5 107 33.6
PSO063G7613 Papaver somniferum HOM05D000002 ORTHO05D000001 1.2e-07 60.1 78 35.9
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-07 60.1 110 38.2
HanXRQChr03g0078371 Helianthus annuus HOM05D000002 ORTHO05D000001 1.6e-07 59.7 75 42.7
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-07 59.3 79 38.0
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-07 59.3 79 40.5
Sabra16G0311100 Salix brachista HOM05D000002 ORTHO05D000001 2.1e-07 59.3 107 33.6
Prupe.1G170400 Prunus persica HOM05D000002 ORTHO05D000001 2.7e-07 58.9 108 36.1
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 2.7e-07 58.9 78 38.5
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 3.6e-07 58.5 99 36.4
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.6e-07 58.5 114 32.5
CANSAT11G0488 Cannabis sativa HOM05D000003 ORTHO05D000126 4.7e-07 58.2 105 28.6
TPR.G33758 Trifolium pratense HOM05D001505 ORTHO05D000001 4.7e-07 58.2 116 31.0
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 6.1e-07 57.8 80 35.0
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.1e-07 57.8 105 30.5
Sopen07g003750 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-07 57.8 94 33.0
CSS0021283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.0e-07 57.4 93 26.9
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 8.0e-07 57.4 78 34.6
Sabra10G0062000 Salix brachista HOM05D000002 ORTHO05D000001 8.0e-07 57.4 98 35.7
ECA232G3484 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-06 57.0 77 44.2
PSO754G0020 Papaver somniferum HOM05D000002 ORTHO05D000001 1.0e-06 57.0 86 31.4
TPR.G32556 Trifolium pratense HOM05D000002 ORTHO05D000001 1.0e-06 57.0 81 29.6
TAR720G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.4e-06 56.6 108 33.3
ECA232G4656 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 56.2 77 42.9
TPR.G32053 Trifolium pratense HOM05D000002 ORTHO05D000001 1.8e-06 56.2 74 33.8
CSS0018413 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-06 55.8 71 32.4
CSS0021297 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-06 55.8 78 28.2
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-06 55.8 78 30.8
Rhsim05G0076500 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.3e-06 55.8 92 33.7
Rhsim06G0053500 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.3e-06 55.8 86 31.4
Rhsim07G0051100 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.3e-06 55.8 108 33.3
Sabra05G0005600 Salix brachista HOM05D000002 ORTHO05D000001 2.3e-06 55.8 104 39.4
TAR696G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.0e-06 55.5 78 37.2
Atru.chr2.2558 Acer truncatum HOM05D019558 ORTHO05D000001 4.0e-06 55.1 109 33.0
CSS0027920 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-06 55.1 93 25.8
ECA238G0397 Erigeron canadensis HOM05D000152 ORTHO05D000609 4.0e-06 55.1 78 37.2
Lalb_Chr06g0171641 Lupinus albus HOM05D000002 ORTHO05D000001 4.0e-06 55.1 111 34.2
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.0e-06 55.1 87 32.2
ECA233G3870 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-06 54.7 80 41.2
Oeu028207.1 Olea europaea HOM05D000002 ORTHO05D000001 5.2e-06 54.7 74 39.2
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 5.2e-06 54.7 74 36.5
CSS0007133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-06 54.3 78 30.8
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-06 54.3 108 29.6
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-06 54.3 78 30.8
Ca_02878_v3 Cicer arietinum L. HOM05D008404 ORTHO05D000001 6.7e-06 54.3 78 25.6
Sabra11G0010600 Salix brachista HOM05D000002 ORTHO05D000001 6.7e-06 54.3 94 29.8
TPR.G12295 Trifolium pratense HOM05D000002 ORTHO05D000001 6.7e-06 54.3 98 29.6
Lalb_Chr05g0228251 Lupinus albus HOM05D008404 ORTHO05D000001 8.8e-06 53.9 70 37.1
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.8e-06 53.9 109 33.0


User provided reference genes

Program Settings