Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G198500 Phaseolus vulgaris HOM05D004561 ORTHO05D005315 2.0e-123 445.7 211 100.0
VMungo0251G0557 Vigna mungo HOM05D004561 ORTHO05D005315 2.3e-111 405.6 200 95.5
Glyma.05G126500 Glycine max HOM05D004561 ORTHO05D005315 1.2e-104 383.3 200 90.5
Glyma.08G081300 Glycine max HOM05D004561 ORTHO05D005315 5.2e-103 377.9 200 90.0
Lj4g0004659 Lotus japonicus HOM05D004561 ORTHO05D005315 8.3e-101 370.5 200 86.0
Psat1g047920 Pisum sativum HOM05D004561 ORTHO05D005315 1.9e-97 359.4 200 84.5
Medtr4g094538 Medicago truncatula HOM05D004561 ORTHO05D005315 2.5e-97 359.0 200 82.5
TPR.G30372 Trifolium pratense HOM05D004561 ORTHO05D005315 4.3e-97 358.2 200 83.5
Lalb_Chr12g0208781 Lupinus albus HOM05D004561 ORTHO05D005315 4.0e-95 351.7 200 82.0
CiPaw.15G149700 Carya illinoinensis HOM05D004561 ORTHO05D005315 3.6e-88 328.6 200 75.5
Potri.012G041700 Populus trichocarpa HOM05D004561 ORTHO05D005315 5.8e-86 321.2 200 71.0
Eucgr.B03172 Eucalyptus grandis HOM05D004561 ORTHO05D005315 2.9e-85 318.9 200 71.5
QL09p040874 Quercus lobata HOM05D004561 ORTHO05D005315 4.9e-85 318.2 200 73.5
Sabra12G0028700 Salix brachista HOM05D004561 ORTHO05D005315 8.3e-85 317.4 200 69.5
CSS0045511 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 1.1e-84 317.0 200 71.0
Dinv14864 Davidia involucrata HOM05D004561 ORTHO05D005315 1.6e-83 313.2 200 73.0
FAN13G2292 Fragaria x ananassa HOM05D004561 ORTHO05D005315 2.1e-83 312.8 200 72.5
FAN18G3337 Fragaria x ananassa HOM05D004561 ORTHO05D005315 2.1e-83 312.8 200 72.5
TWI15G0666 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 2.7e-83 312.4 200 69.0
GSVIVG01028605001 Vitis vinifera HOM05D004561 ORTHO05D005315 6.0e-83 311.2 200 70.5
FAN08G3218 Fragaria x ananassa HOM05D004561 ORTHO05D005315 7.8e-83 310.8 200 72.0
TWI81G0190 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 1.0e-82 310.5 200 69.0
Atru.chr13.142 Acer truncatum HOM05D004561 ORTHO05D005315 1.3e-82 310.1 205 66.8
Prupe.5G069900 Prunus persica HOM05D004561 ORTHO05D005315 1.7e-82 309.7 200 72.0
FvH4_7g18930 Fragaria vesca HOM05D004561 ORTHO05D005315 2.3e-82 309.3 200 71.5
FAN06G3856 Fragaria x ananassa HOM05D004561 ORTHO05D005315 2.3e-82 309.3 200 71.5
MD16G1270300 Malus domestica HOM05D004561 ORTHO05D005315 8.6e-82 307.4 200 72.5
PGSC0003DMG400009224 Solanum tuberosum HOM05D004561 ORTHO05D005315 1.5e-81 306.6 200 67.5
HanXRQChr15g0480201 Helianthus annuus HOM05D004561 ORTHO05D005315 1.9e-81 306.2 200 67.5
Thecc.01G124300 Theobroma cacao HOM05D004561 ORTHO05D005315 4.3e-81 305.1 200 70.0
CAN.G370.25 Capsicum annuum HOM05D004561 ORTHO05D005315 9.6e-81 303.9 200 68.0
TAR628G1415 Trochodendron aralioides HOM05D004561 ORTHO05D005315 1.6e-80 303.1 202 66.8
FvH4_5g18940 Fragaria vesca HOM05D004561 ORTHO05D005315 2.8e-80 302.4 200 70.5
Solyc08g074360.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 3.6e-80 302.0 200 66.0
RcHm_v2.0_Chr7g0203331 Rosa chinensis HOM05D004561 ORTHO05D005315 6.2e-80 301.2 200 72.0
FAN06G2746 Fragaria x ananassa HOM05D004561 ORTHO05D005315 8.1e-80 300.8 194 71.6
Sed0015683 Sechium edule HOM05D004561 ORTHO05D005315 8.1e-80 300.8 201 67.2
COL.COLO4_13996 Corchorus olitorius HOM05D004561 ORTHO05D005315 1.4e-79 300.1 200 68.5
FAN04G2378 Fragaria x ananassa HOM05D004561 ORTHO05D005315 2.4e-79 299.3 191 72.3
Solyc11g017400.2 Solanum lycopersicum HOM05D004561 ORTHO05D005315 6.8e-79 297.7 200 66.5
Sopen08g023020 Solanum pennellii HOM05D004561 ORTHO05D005315 6.8e-79 297.7 200 65.5
Peaxi162Scf00152g00158 Petunia axillaris HOM05D004561 ORTHO05D005315 1.2e-78 297.0 203 67.0
Sc18g0002470 Simmondsia chinensis HOM05D004561 ORTHO05D005315 1.2e-78 297.0 200 65.5
Ciclev10002226m.g Citrus clementina HOM05D004561 ORTHO05D005315 1.5e-78 296.6 200 64.5
MELO3C017214.2 Cucumis melo HOM05D004561 ORTHO05D005315 2.0e-78 296.2 200 66.5
Gorai.012G033300 Gossypium raimondii HOM05D004561 ORTHO05D005315 2.6e-78 295.8 200 66.5
Hma1.2p1_0018F.1_g012650 Hydrangea macrophylla HOM05D004561 ORTHO05D005315 2.6e-78 295.8 200 67.0
Lj6g0005186 Lotus japonicus HOM05D004561 ORTHO05D005315 5.8e-78 294.7 162 82.7
Nn5g27375 Nelumbo nucifera HOM05D004561 ORTHO05D005315 5.8e-78 294.7 200 64.5
Hund26218 Selenicereus undatus HOM05D004561 ORTHO05D005315 9.9e-78 293.9 200 65.0
Gohir.D04G023500 Gossypium hirsutum HOM05D004561 ORTHO05D005315 1.3e-77 293.5 200 66.0
CsaV3_1G002780 Cucumis sativus L. HOM05D004561 ORTHO05D005315 2.2e-77 292.7 200 66.0
Lsat_1_v5_gn_7_30581 Lactuca sativa HOM05D004561 ORTHO05D005315 6.4e-77 291.2 200 67.0
Gohir.A05G386400 Gossypium hirsutum HOM05D004561 ORTHO05D005315 8.4e-77 290.8 200 65.5
Lj1A1185G61 Lonicera japonica HOM05D004561 ORTHO05D005315 3.2e-76 288.9 238 59.7
Migut.I00621 Erythranthe guttata HOM05D004561 ORTHO05D005315 4.2e-76 288.5 200 64.0
MSTRG.11225 Avicennia marina HOM05D004561 ORTHO05D005315 7.1e-76 287.7 200 64.5
MSTRG.22847 Avicennia marina HOM05D004561 ORTHO05D005315 1.6e-75 286.6 200 65.5
Manes.08G062966 Manihot esculenta HOM05D004561 ORTHO05D005315 7.8e-75 284.3 200 63.5
vmacro18667 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 7.8e-75 284.3 225 59.6
PSO210G6857 Papaver somniferum HOM05D004561 ORTHO05D005315 1.0e-74 283.9 200 63.0
Nitab4.5_0000422g0080 Nicotiana tabacum HOM05D004561 ORTHO05D005315 3.0e-74 282.3 184 69.6
ECA233G0879 Erigeron canadensis HOM05D004561 ORTHO05D005315 3.9e-74 282.0 200 63.5
SalBow1G5912 Salvia bowleyana HOM05D004561 ORTHO05D005315 6.6e-74 281.2 204 65.2
PGSC0003DMG403029595 Solanum tuberosum HOM05D004561 ORTHO05D005315 1.5e-73 280.0 181 67.4
Aqoxy6G01699 Aquilegia oxysepala HOM05D004561 ORTHO05D005315 4.3e-73 278.5 200 61.5
A07p23920 Brassica napus HOM05D004561 ORTHO05D005315 1.3e-72 276.9 200 62.5
BraA07t30043Z Brassica rapa HOM05D004561 ORTHO05D005315 2.1e-72 276.2 200 62.5
THA.LOC104822320 Tarenaya hassleriana HOM05D004561 ORTHO05D005315 2.8e-72 275.8 201 63.2
Rhsim06G0237000 Rhododendron simsii HOM05D004561 ORTHO05D005315 3.6e-72 275.4 185 65.9
Sp5g04590 Schrenkiella parvula HOM05D004561 ORTHO05D005315 3.6e-72 275.4 200 64.5
BcaB02g07548 Brassica carinata HOM05D004561 ORTHO05D005315 4.8e-72 275.0 200 62.0
Sopen11g009350 Solanum pennellii HOM05D004561 ORTHO05D005315 2.4e-71 272.7 180 67.2
BcaC08g44900 Brassica carinata HOM05D004561 ORTHO05D005315 3.1e-71 272.3 200 61.5
BolC6t37673H Brassica oleracea HOM05D004561 ORTHO05D005315 5.3e-71 271.6 200 61.5
Cc03_g07430 Coffea canephora HOM05D004561 ORTHO05D005315 9.0e-71 270.8 200 66.0
SalBow3G1851 Salvia bowleyana HOM05D004561 ORTHO05D005315 2.6e-70 269.2 214 59.8
CARHR168490 Cardamine hirsuta HOM05D004561 ORTHO05D005315 5.8e-70 268.1 200 61.5
AT3G58130 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 2.2e-69 266.2 200 61.5
AL5G39820 Arabidopsis lyrata HOM05D004561 ORTHO05D005315 3.8e-69 265.4 200 62.0
CDE04G2633 Ceratophyllum demersum HOM05D004561 ORTHO05D005315 4.9e-69 265.0 200 56.5
ClCG06G015750 Citrullus lanatus HOM05D000113 ORTHO05D002571 1.1e-68 263.8 181 65.7
Peaxi162Scf00310g00711 Petunia axillaris HOM05D004561 ORTHO05D005315 1.4e-68 263.5 196 63.3
AT2G27340 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 1.9e-68 263.1 200 61.5
Carub.0005s2498 Capsella rubella HOM05D004561 ORTHO05D005315 4.2e-68 261.9 200 60.0
Oeu031248.3 Olea europaea HOM05D004561 ORTHO05D005315 7.1e-68 261.2 232 55.2
DCAR_002722 Daucus carota HOM05D004561 ORTHO05D005315 1.2e-67 260.4 196 63.8
Thhalv10002077m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 1.2e-67 260.4 203 60.6
ATR0661G441 Amborella trichopoda HOM05D004561 ORTHO05D005315 2.3e-66 256.1 200 59.0
AUR62010959 Chenopodium quinoa HOM05D004561 ORTHO05D005315 2.3e-66 256.1 180 63.9
Zm00001eb433850 Zea mays HOM05D004561 ORTHO05D005315 3.0e-66 255.8 200 56.5
AUR62007426 Chenopodium quinoa HOM05D004561 ORTHO05D005315 3.9e-66 255.4 180 63.3
C06p25150 Brassica napus HOM05D004561 ORTHO05D005315 2.5e-65 252.7 242 51.2
AUR62021469 Chenopodium quinoa HOM05D004561 ORTHO05D005315 4.3e-65 251.9 192 60.9
Os04g0678800 Oryza sativa ssp. japonica HOM05D004561 ORTHO05D005315 4.3e-65 251.9 200 60.5
SGA_v2.0_scaffold37G14646 Striga asiatica HOM05D004561 ORTHO05D005315 1.6e-64 250.0 178 62.4
unitig_744.g24647 Utricularia gibba HOM05D004561 ORTHO05D005315 2.8e-64 249.2 215 56.7
Thhalv10002036m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 6.2e-64 248.1 201 59.7
arahy.Tifrunner.gnm1.ann1.AX2CN5 Arachis hypogaea HOM05D004561 ORTHO05D005315 1.8e-63 246.5 205 62.0
EL10Ac8g18446 Beta vulgaris HOM05D004561 ORTHO05D005315 3.1e-63 245.7 182 61.0
C08p33660 Brassica napus HOM05D004561 ORTHO05D005315 9.0e-63 244.2 200 57.5
FAN18G2677 Fragaria x ananassa HOM05D004561 ORTHO05D005315 2.4e-60 236.1 185 62.7
SHI05351 Sapria himalayana HOM05D004561 ORTHO05D005315 4.2e-60 235.3 203 57.1
BcaC07g40276 Brassica carinata HOM05D004561 ORTHO05D005315 1.6e-59 233.4 205 55.1
RcHm_v2.0_Chr7g0203411 Rosa chinensis HOM05D004561 ORTHO05D005315 3.7e-56 222.2 200 55.5
Aa31LG10G12840 Aethionema arabicum HOM05D004561 ORTHO05D005315 1.1e-55 220.7 239 50.6
ECA236G3170 Erigeron canadensis HOM05D004561 ORTHO05D005315 6.7e-50 201.4 141 63.1
Pp3c13_19470 Physcomitrium patens HOM05D004561 ORTHO05D005315 3.3e-49 199.1 211 45.0
arahy.Tifrunner.gnm1.ann1.3X42ZC Arachis hypogaea HOM05D004561 ORTHO05D005315 1.3e-48 197.2 109 82.6
A09p50910 Brassica napus HOM05D004561 ORTHO05D005315 1.4e-47 193.7 209 50.2
CAN.G1530.1 Capsicum annuum HOM05D004561 ORTHO05D005315 6.9e-47 191.4 128 65.6
Carub.0339s0001 Capsella rubella HOM05D004561 ORTHO05D005315 3.8e-45 185.7 141 63.1
AagrBONN_evm.TU.Sc2ySwM_368.3407 Anthoceros agrestis HOM05D004561 ORTHO05D005315 1.1e-44 184.1 211 43.1
AUR62002652 Chenopodium quinoa HOM05D004561 ORTHO05D005315 1.4e-44 183.7 167 52.7
Cpa.g.sc437.1 Carica papaya HOM05D004561 ORTHO05D005315 2.7e-43 179.5 145 61.4
BolC8t50963H Brassica oleracea HOM05D004561 ORTHO05D005315 3.5e-43 179.1 164 53.0
BcaC07g40185 Brassica carinata HOM05D004561 ORTHO05D005315 3.3e-41 172.6 200 48.0
Zm00001eb066050 Zea mays HOM05D004561 ORTHO05D005315 4.3e-41 172.2 126 58.7
HPP92_027560 Vanilla planifolia HOM05D004561 ORTHO05D005315 7.4e-41 171.4 131 58.8
vmacro21453 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 1.3e-40 170.6 109 67.0
PSO761G0502 Papaver somniferum HOM05D004561 ORTHO05D005315 3.1e-39 166.0 119 61.3
Mapoly0029s0047 Marchantia polymorpha HOM05D004561 ORTHO05D005315 1.0e-37 161.0 192 43.8
MD06G1059000 Malus domestica HOM05D004561 ORTHO05D005315 1.7e-37 160.2 112 67.9
arahy.Tifrunner.gnm1.ann1.Y05SLV Arachis hypogaea HOM05D004561 ORTHO05D005315 6.7e-34 148.3 96 72.9
CiPaw.16G098200 Carya illinoinensis HOM05D004561 ORTHO05D005315 7.4e-33 144.8 92 70.7
Sopen05g006540 Solanum pennellii HOM05D004561 ORTHO05D005315 1.7e-32 143.7 148 50.7
Nitab4.5_0000560g0110 Nicotiana tabacum HOM05D004561 ORTHO05D005315 1.1e-31 141.0 94 66.0
CSS0036958 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 1.5e-30 137.1 84 73.8
CSS0005948 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 1.0e-29 134.4 84 72.6
CSS0005045 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 1.3e-29 134.0 84 72.6
CSS0006634 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 2.9e-29 132.9 84 71.4
SalBow1G4548 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.1e-28 131.0 114 54.4
MCO09G807 Micromonas commoda HOM05D004561 ORTHO05D005315 1.9e-28 130.2 205 37.6
Haze_18936 Corylus avellana HOM05D004561 ORTHO05D005315 3.2e-28 129.4 109 56.9
Hund02231 Selenicereus undatus HOM05D004561 ORTHO05D005315 2.7e-27 126.3 178 38.2
CBR_g12600 Chara braunii HOM05D005240 ORTHO05D006471 8.8e-26 121.3 266 29.3
Hund26251 Selenicereus undatus HOM05D004561 ORTHO05D005315 1.1e-25 120.9 97 56.7
Sopen08g022960 Solanum pennellii HOM05D004561 ORTHO05D005315 4.1e-23 112.5 73 63.0
PRCOL_00001899 Prasinoderma coloniale HOM05D004561 ORTHO05D005315 1.2e-22 110.9 211 31.8
Carub.0008s0419 Capsella rubella HOM05D004561 ORTHO05D005315 2.0e-22 110.2 68 66.2
Nitab4.5_0013603g0010 Nicotiana tabacum HOM05D004561 ORTHO05D005315 2.6e-22 109.8 71 69.0
SalBow1G4039 Salvia bowleyana HOM05D004561 ORTHO05D005315 7.7e-22 108.2 66 69.7
Solyc05g010730.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 1.3e-21 107.5 69 68.1
SalBow1G5331 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.7e-21 107.1 66 71.2
MBI08_g32523_MAGBIO Magnolia biondii HOM05D004561 ORTHO05D005315 2.9e-21 106.3 75 61.3
SalBow1G2796 Salvia bowleyana HOM05D004561 ORTHO05D005315 5.0e-21 105.5 66 69.7
Cre06.g300100 Chlamydomonas reinhardtii HOM05D004561 ORTHO05D005315 4.2e-20 102.4 253 26.5
Cpa.g.c32558.1 Carica papaya HOM05D004561 ORTHO05D005315 4.0e-18 95.9 60 66.7
SEGI_12631 Sequoiadendron giganteum HOM05D004561 ORTHO05D005315 5.2e-18 95.5 74 55.4
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 1.7e-13 80.5 59 64.4
SalBow1G7315 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.7e-13 80.5 183 30.6
SHI05852 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-13 79.3 83 53.0
Ca_17309_v3 Cicer arietinum L. HOM05D002967 ORTHO05D003281 6.8e-10 68.6 38 81.6
FvH4_5g18980 Fragaria vesca HOM05D004561 ORTHO05D005315 5.7e-09 65.5 80 43.8
Cc05_g02560 Coffea canephora HOM05D004561 ORTHO05D005315 1.1e-07 61.2 71 47.9
TAR371G0964 Trochodendron aralioides HOM05D000762 ORTHO05D002234 7.7e-06 55.1 42 57.1


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