Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G194700 Phaseolus vulgaris HOM05D006911 ORTHO05D006663 6.7e-31 136.7 70 100.0
Glyma.08G083800 Glycine max HOM05D006911 ORTHO05D006663 2.2e-21 105.1 72 80.6
Glyma.05G129200 Glycine max HOM05D006911 ORTHO05D006663 7.2e-17 90.1 70 75.7
Medtr4g094630 Medicago truncatula HOM05D006911 ORTHO05D006663 3.1e-12 74.7 73 54.8
Medtr4g094635 Medicago truncatula HOM05D006911 ORTHO05D006663 1.2e-11 72.8 72 54.2
TWI09G0032 Tripterygium wilfordii HOM05D006911 ORTHO05D006663 1.2e-11 72.8 68 55.9
Prupe.4G077900 Prunus persica HOM05D006911 ORTHO05D006663 3.5e-11 71.2 73 54.8
TPR.G4919 Trifolium pratense HOM05D006911 ORTHO05D006663 1.0e-10 69.7 74 51.4
COL.COLO4_38300 Corchorus olitorius HOM05D006911 ORTHO05D006663 5.0e-10 67.4 67 50.7
RcHm_v2.0_Chr7g0229651 Rosa chinensis HOM05D006911 ORTHO05D006663 8.5e-10 66.6 74 51.4
Thecc.06G153400 Theobroma cacao HOM05D006911 ORTHO05D006663 1.1e-09 66.2 72 50.0
MD05G1287000 Malus domestica HOM05D006911 ORTHO05D006663 1.9e-09 65.5 71 53.5
Nn4g26517 Nelumbo nucifera HOM05D006911 ORTHO05D006663 1.9e-09 65.5 69 50.7
QL05p059038 Quercus lobata HOM05D006911 ORTHO05D006663 5.5e-09 63.9 63 50.8
RcHm_v2.0_Chr5g0013541 Rosa chinensis HOM05D006911 ORTHO05D006663 9.4e-09 63.2 74 48.6
Gohir.A05G149800 Gossypium hirsutum HOM05D006911 ORTHO05D006663 1.2e-08 62.8 72 47.2
Ciclev10017350m.g Citrus clementina HOM05D006911 ORTHO05D006663 1.6e-08 62.4 63 52.4
FAN21G0769 Fragaria x ananassa HOM05D006911 ORTHO05D006663 1.6e-08 62.4 74 48.6
COL.COLO4_24713 Corchorus olitorius HOM05D006911 ORTHO05D006663 2.1e-08 62.0 63 52.4
Gohir.D05G152400 Gossypium hirsutum HOM05D006911 ORTHO05D006663 4.7e-08 60.8 72 45.8
Gohir.A06G197500 Gossypium hirsutum HOM05D006911 ORTHO05D006663 1.4e-07 59.3 65 52.3
Lj4g0007682 Lotus japonicus HOM05D006911 ORTHO05D006663 1.4e-07 59.3 73 50.7
CiPaw.09G126200 Carya illinoinensis HOM05D006911 ORTHO05D006663 1.8e-07 58.9 66 43.9
Gohir.A10G039300 Gossypium hirsutum HOM05D006911 ORTHO05D006663 1.8e-07 58.9 66 47.0
Gohir.D06G205000 Gossypium hirsutum HOM05D006911 ORTHO05D006663 2.3e-07 58.5 65 52.3
Gohir.D10G040100 Gossypium hirsutum HOM05D006911 ORTHO05D006663 2.3e-07 58.5 66 47.0
Gorai.011G042200 Gossypium raimondii HOM05D006911 ORTHO05D006663 2.3e-07 58.5 66 47.0
Nn3g20669 Nelumbo nucifera HOM05D006911 ORTHO05D006663 3.0e-07 58.2 69 43.5
ClCG01G024470 Citrullus lanatus HOM05D006911 ORTHO05D006663 5.2e-07 57.4 68 48.5
Sed0011251 Sechium edule HOM05D006911 ORTHO05D006663 6.7e-07 57.0 57 56.1
MELO3C007147.2 Cucumis melo HOM05D006911 ORTHO05D006663 1.2e-06 56.2 68 48.5
FvH4_3g05900 Fragaria vesca HOM05D006911 ORTHO05D006663 1.2e-06 56.2 70 45.7
Potri.011G079900 Populus trichocarpa HOM05D006911 ORTHO05D006663 1.5e-06 55.8 64 46.9
CsaV3_6G051600 Cucumis sativus L. HOM05D006911 ORTHO05D006663 2.0e-06 55.5 68 48.5
Gorai.009G156500 Gossypium raimondii HOM05D006911 ORTHO05D006663 2.0e-06 55.5 68 44.1
Gorai.010G239100 Gossypium raimondii HOM05D006911 ORTHO05D006663 2.0e-06 55.5 65 49.2
Potri.004G131200 Populus trichocarpa HOM05D006911 ORTHO05D006663 2.6e-06 55.1 70 45.7
PGR083G1670 Punica granatum HOM05D006911 ORTHO05D006663 2.6e-06 55.1 70 50.0
Lalb_Chr07g0188701 Lupinus albus HOM05D006911 ORTHO05D006663 3.3e-06 54.7 77 44.2
Medtr5g091310 Medicago truncatula HOM05D006911 ORTHO05D006663 3.3e-06 54.7 73 46.6
Manes.15G119700 Manihot esculenta HOM05D006911 ORTHO05D006663 7.5e-06 53.5 50 52.0


User provided reference genes

Program Settings