Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G188100 Phaseolus vulgaris HOM05D005903 ORTHO05D007293 7.9e-149 530.4 266 100.0
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 4.8e-138 494.6 266 92.1
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 3.0e-124 448.7 266 85.0
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 7.5e-123 444.1 264 84.8
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 1.6e-120 436.4 266 79.3
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 2.7e-120 435.6 266 80.8
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 1.0e-119 433.7 266 80.1
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 1.4e-116 423.3 265 78.5
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 3.7e-106 388.7 255 75.7
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 3.8e-103 378.6 265 68.3
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 1.9e-102 376.3 264 69.7
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 1.0e-100 370.5 265 68.7
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 1.0e-100 370.5 264 66.3
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 6.8e-100 367.9 263 70.0
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 8.9e-100 367.5 263 67.7
Ciclev10016117m.g Citrus clementina HOM05D005903 ORTHO05D007293 3.4e-99 365.5 263 67.3
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 4.4e-99 365.2 263 67.7
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 7.5e-99 364.4 266 65.0
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.3e-98 363.6 266 66.5
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 1.7e-98 363.2 266 68.0
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 2.9e-98 362.5 264 66.7
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 3.7e-98 362.1 266 66.5
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 3.7e-98 362.1 266 66.5
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 6.4e-98 361.3 266 67.7
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 8.3e-98 360.9 266 66.9
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.1e-97 360.5 266 65.8
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.8e-97 359.8 266 65.4
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 3.2e-97 359.0 268 64.2
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 7.0e-97 357.8 263 66.5
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 1.6e-96 356.7 263 66.2
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 1.6e-96 356.7 264 67.4
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 2.0e-96 356.3 266 65.8
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 1.7e-95 353.2 264 65.2
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 2.3e-95 352.8 263 65.4
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 5.0e-95 351.7 264 65.2
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 8.6e-95 350.9 263 65.4
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 2.5e-94 349.4 263 65.0
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 2.5e-94 349.4 263 65.0
Lj1C1150G3 Lonicera japonica HOM05D005903 ORTHO05D007293 2.5e-94 349.4 254 65.0
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 3.3e-94 349.0 263 64.6
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 3.3e-94 349.0 265 64.5
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 4.3e-94 348.6 264 64.0
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 4.3e-94 348.6 263 64.6
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 9.5e-94 347.4 257 66.9
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 1.6e-93 346.7 263 66.2
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 1.6e-93 346.7 263 66.2
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 1.6e-93 346.7 263 65.0
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 2.1e-93 346.3 264 63.6
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 4.7e-93 345.1 264 64.0
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 8.0e-93 344.4 263 65.4
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 1.1e-92 344.0 264 63.6
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 1.4e-92 343.6 263 65.8
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 1.8e-92 343.2 263 65.4
Prupe.4G118500 Prunus persica HOM05D005903 ORTHO05D007293 2.3e-92 342.8 247 67.2
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 4.0e-92 342.0 263 63.5
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 5.2e-92 341.7 263 65.0
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 5.2e-92 341.7 263 65.0
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 5.2e-92 341.7 263 65.0
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 6.8e-92 341.3 263 63.5
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 2.0e-91 339.7 263 63.5
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 2.0e-91 339.7 264 64.0
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 2.6e-91 339.3 264 62.5
AUR62032162 Chenopodium quinoa HOM05D005903 ORTHO05D007293 3.4e-91 339.0 264 63.6
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 3.4e-91 339.0 260 63.8
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 4.4e-91 338.6 198 82.3
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 9.8e-91 337.4 268 61.9
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 1.3e-90 337.0 263 63.9
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 2.2e-90 336.3 263 64.3
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 2.2e-90 336.3 268 61.9
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 2.9e-90 335.9 263 63.1
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 3.7e-90 335.5 263 63.5
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 6.4e-90 334.7 263 63.9
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 8.3e-90 334.3 263 62.4
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 8.3e-90 334.3 268 62.3
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 8.3e-90 334.3 264 62.1
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 8.3e-90 334.3 264 62.1
Rhsim07G0106900 Rhododendron simsii HOM05D005903 ORTHO05D007293 5.4e-89 331.6 263 62.0
Sopen02g026460 Solanum pennellii HOM05D005903 ORTHO05D007293 7.0e-89 331.3 256 63.7
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 2.0e-88 329.7 266 62.0
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 7.8e-88 327.8 278 60.8
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 1.7e-87 326.6 266 61.3
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 2.3e-87 326.2 264 58.0
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 6.6e-87 324.7 263 63.1
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 8.6e-87 324.3 236 66.1
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 2.5e-86 322.8 299 54.2
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 3.3e-86 322.4 267 61.4
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 4.3e-86 322.0 263 62.7
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 7.3e-86 321.2 238 66.0
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 7.3e-86 321.2 269 62.5
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 1.4e-84 317.0 247 65.2
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 1.4e-84 317.0 311 53.7
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 7.5e-83 311.2 287 56.8
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 7.1e-81 304.7 263 57.0
SGA_v2.0_scaffold31G12765 Striga asiatica HOM05D005903 ORTHO05D007293 9.2e-81 304.3 297 52.9
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 2.3e-79 299.7 258 58.9
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 1.9e-78 296.6 256 62.1
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 5.2e-76 288.5 264 57.2
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 2.2e-74 283.1 263 55.9
Peaxi162Scf00036g02217 Petunia axillaris HOM05D005903 ORTHO05D007293 5.1e-71 271.9 264 53.0
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 7.3e-70 268.1 264 50.0
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 2.0e-67 260.0 167 74.3
SEGI_28167 Sequoiadendron giganteum HOM05D005903 ORTHO05D007293 3.4e-67 259.2 264 51.5
HPP92_021274 Vanilla planifolia HOM05D005903 ORTHO05D007293 3.4e-67 259.2 259 54.1
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 3.8e-58 229.2 266 47.0
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 2.4e-57 226.5 125 85.6
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 7.1e-57 224.9 264 48.5
Mapoly0019s0171 Marchantia polymorpha HOM05D005903 ORTHO05D007293 2.5e-54 216.5 261 44.1
Pp3c7_4190 Physcomitrium patens HOM05D005903 ORTHO05D007293 4.3e-54 215.7 261 42.5
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 2.1e-53 213.4 126 78.6
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 6.2e-53 211.8 167 61.7
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 6.9e-52 208.4 152 65.1
SMO367G0859 Selaginella moellendorffii HOM05D005903 ORTHO05D007293 2.6e-51 206.5 266 42.5
Lalb_Chr07g0188221 Lupinus albus HOM05D005903 ORTHO05D007293 1.0e-47 194.5 156 64.7
Sc04g0004130 Simmondsia chinensis HOM05D005903 ORTHO05D007293 1.0e-47 194.5 167 56.3
unitig_46.g18341 Utricularia gibba HOM05D005903 ORTHO05D007293 2.1e-40 170.2 256 43.4
Haze_05249 Corylus avellana HOM05D005903 ORTHO05D007293 4.6e-40 169.1 203 51.2
Gohir.D11G050975 Gossypium hirsutum HOM05D005903 ORTHO05D007293 7.9e-40 168.3 141 62.4
Oeu056062.1 Olea europaea HOM05D005903 ORTHO05D007293 7.6e-35 151.8 98 73.5
Cfa024540 Carpinus fangiana HOM05D005903 ORTHO05D007293 1.2e-32 144.4 192 40.1
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 4.1e-28 129.4 156 42.9
Os11g0549690 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 2.6e-27 126.7 93 63.4
Cre10.g436900 Chlamydomonas reinhardtii HOM05D005903 ORTHO05D007293 5.0e-26 122.5 274 34.7
MCO11G061 Micromonas commoda HOM05D005903 ORTHO05D007293 8.5e-26 121.7 270 31.5
CARHR106840 Cardamine hirsuta HOM05D005903 ORTHO05D007293 3.9e-23 112.8 113 50.4
Glyma.08G193350 Glycine max HOM05D005903 ORTHO05D007293 5.7e-22 109.0 60 91.7
Migut.O00470 Erythranthe guttata HOM05D005903 ORTHO05D007293 4.5e-19 99.4 115 49.6
Sc04g0004120 Simmondsia chinensis HOM05D005903 ORTHO05D007293 5.0e-18 95.9 56 78.6
COL.COLO4_05792 Corchorus olitorius HOM05D005903 ORTHO05D007293 1.5e-14 84.3 76 52.6
PRCOL_00001260 Prasinoderma coloniale HOM05D005903 ORTHO05D007293 1.5e-14 84.3 288 28.5
CAN.G508.15 Capsicum annuum HOM05D005903 ORTHO05D007293 5.9e-11 72.4 245 25.3
CBR_g8146 Chara braunii HOM05D005903 ORTHO05D000048 2.1e-08 63.9 66 45.5
SHI32710 Sapria himalayana HOM05D005903 ORTHO05D007293 2.7e-08 63.5 78 47.4
Oeu056063.2 Olea europaea HOM05D007234 ORTHO05D008488 3.6e-08 63.2 60 51.7
Cfa001138 Carpinus fangiana HOM05D000398 ORTHO05D000551 8.8e-07 58.5 65 41.5


User provided reference genes

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