Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G187600 Phaseolus vulgaris HOM05D006797 ORTHO05D007696 5.2e-49 197.6 113 100.0
VMungo0251G2933 Vigna mungo HOM05D006797 ORTHO05D007696 4.2e-35 151.4 113 82.3
Glyma.08G089600 Glycine max HOM05D006797 ORTHO05D007696 2.8e-34 148.7 114 78.1
Glyma.05G134500 Glycine max HOM05D006797 ORTHO05D007696 3.6e-34 148.3 114 76.3
arahy.Tifrunner.gnm1.ann1.30I9D2 Arachis hypogaea HOM05D006797 ORTHO05D007696 7.8e-29 130.6 115 73.0
arahy.Tifrunner.gnm1.ann1.3X9X11 Arachis hypogaea HOM05D006797 ORTHO05D007696 7.8e-29 130.6 115 73.0
Ciclev10017227m.g Citrus clementina HOM05D006797 ORTHO05D007696 2.3e-28 129.0 110 69.1
Sc24g0002860 Simmondsia chinensis HOM05D006797 ORTHO05D007696 5.0e-28 127.9 115 64.3
Psat7g087040 Pisum sativum HOM05D006797 ORTHO05D007696 1.9e-27 125.9 117 65.0
Ca_18220_v3 Cicer arietinum L. HOM05D006797 ORTHO05D007696 3.3e-27 125.2 121 66.9
Lalb_Chr07g0188191 Lupinus albus HOM05D006797 ORTHO05D007696 3.3e-27 125.2 114 68.4
Ah.15g091850 Amaranthus hybridus HOM05D006797 ORTHO05D007696 5.6e-27 124.4 110 68.2
TPR.G27392 Trifolium pratense HOM05D006797 ORTHO05D007696 9.5e-27 123.6 116 65.5
Medtr4g094782 Medicago truncatula HOM05D006797 ORTHO05D007696 1.2e-26 123.2 116 66.4
EL10Ac7g17249 Beta vulgaris HOM05D006797 ORTHO05D007696 2.8e-26 122.1 113 63.7
QL11p011767 Quercus lobata HOM05D006797 ORTHO05D007696 1.4e-25 119.8 113 62.8
CiPaw.10G107100 Carya illinoinensis HOM05D006797 ORTHO05D007696 5.2e-25 117.9 116 62.9
Sed0011432 Sechium edule HOM05D006797 ORTHO05D007696 8.9e-25 117.1 116 67.2
TAR626G0010 Trochodendron aralioides HOM05D006797 ORTHO05D007696 1.2e-24 116.7 121 62.8
CSS0049260 Camellia sinensis var. sinensis HOM05D006797 ORTHO05D007696 3.4e-24 115.2 126 63.5
Hund23985 Selenicereus undatus HOM05D006797 ORTHO05D007696 5.7e-24 114.4 94 69.1
Prupe.4G119300 Prunus persica HOM05D006797 ORTHO05D007696 9.8e-24 113.6 120 61.7
Lj4g0013366 Lotus japonicus HOM05D006797 ORTHO05D007696 1.3e-23 113.2 116 65.5
SGA_v2.0_scaffold44G16576 Striga asiatica HOM05D001006 ORTHO05D000868 1.3e-23 113.2 115 63.5
TWI38G0311 Tripterygium wilfordii HOM05D006797 ORTHO05D007696 2.2e-23 112.5 120 60.8
ClCG01G025860 Citrullus lanatus HOM05D006797 ORTHO05D007696 2.9e-23 112.1 122 63.1
RcHm_v2.0_Chr5g0021541 Rosa chinensis HOM05D006797 ORTHO05D007696 2.9e-23 112.1 118 58.5
SGA_v2.0_scaffold60G20810 Striga asiatica HOM05D006797 ORTHO05D007696 8.3e-23 110.5 116 59.5
Manes.03G071800 Manihot esculenta HOM05D006797 ORTHO05D007696 1.4e-22 109.8 115 61.7
MELO3C007002.2 Cucumis melo HOM05D006797 ORTHO05D007696 1.8e-22 109.4 122 60.7
Atru.chr10.261 Acer truncatum HOM05D006797 ORTHO05D007696 3.2e-22 108.6 121 59.5
Cc09_g04790 Coffea canephora HOM05D006797 ORTHO05D007696 1.2e-21 106.7 119 61.3
Migut.F00519 Erythranthe guttata HOM05D006797 ORTHO05D007696 1.2e-21 106.7 118 61.0
Oeu036765.2 Olea europaea HOM05D006797 ORTHO05D007696 1.2e-21 106.7 126 57.1
GSVIVG01012170001 Vitis vinifera HOM05D006797 ORTHO05D007696 2.0e-21 105.9 122 59.0
CsaV3_6G053080 Cucumis sativus L. HOM05D006797 ORTHO05D007696 2.7e-21 105.5 122 59.8
MD10G1226000 Malus domestica HOM05D006797 ORTHO05D007696 2.7e-21 105.5 120 56.7
PGR042G0784 Punica granatum HOM05D006797 ORTHO05D007696 2.7e-21 105.5 127 59.8
Rhsim13G0134800 Rhododendron simsii HOM05D006797 ORTHO05D007696 2.7e-21 105.5 127 55.1
Duzib211G0055 Durio zibethinus HOM05D006797 ORTHO05D007696 3.5e-21 105.1 126 58.7
Gorai.010G130400 Gossypium raimondii HOM05D006797 ORTHO05D007696 3.5e-21 105.1 126 59.5
Solyc02g082020.3 Solanum lycopersicum HOM05D006797 ORTHO05D007696 3.5e-21 105.1 115 66.1
CAN.G809.30 Capsicum annuum HOM05D006797 ORTHO05D007696 4.6e-21 104.8 115 66.1
Nn1g05854 Nelumbo nucifera HOM05D006797 ORTHO05D007696 5.9e-21 104.4 111 62.2
Sopen02g026660 Solanum pennellii HOM05D006797 ORTHO05D007696 5.9e-21 104.4 115 65.2
SalBow3G3973 Salvia bowleyana HOM05D006797 ORTHO05D007696 7.8e-21 104.0 109 61.5
MSTRG.8842 Avicennia marina HOM05D006797 ORTHO05D007696 1.0e-20 103.6 118 58.5
Gohir.A06G110200 Gossypium hirsutum HOM05D006797 ORTHO05D007696 1.3e-20 103.2 126 58.7
CDE05G1867 Ceratophyllum demersum HOM05D006797 ORTHO05D007696 3.0e-20 102.1 118 59.3
AUR62042807 Chenopodium quinoa HOM05D006797 ORTHO05D007696 3.0e-20 102.1 108 62.0
Gohir.D06G114100 Gossypium hirsutum HOM05D006797 ORTHO05D007696 3.0e-20 102.1 126 57.9
Nitab4.5_0000632g0020 Nicotiana tabacum HOM05D006797 ORTHO05D007696 3.0e-20 102.1 115 64.3
PGSC0003DMG400007337 Solanum tuberosum HOM05D006797 ORTHO05D007696 3.0e-20 102.1 115 64.3
Nitab4.5_0003902g0030 Nicotiana tabacum HOM05D006797 ORTHO05D007696 3.9e-20 101.7 115 63.5
Dinv03172 Davidia involucrata HOM05D006797 ORTHO05D007696 6.6e-20 100.9 126 54.0
Hma1.2p1_1220F.1_g268030 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 6.6e-20 100.9 124 55.6
Peaxi162Scf00036g02019 Petunia axillaris HOM05D006797 ORTHO05D007696 8.6e-20 100.5 111 65.8
CANSAT35G2044 Cannabis sativa HOM05D006797 ORTHO05D007696 4.3e-19 98.2 110 57.3
HPP92_013198 Vanilla planifolia HOM05D006797 ORTHO05D007696 4.3e-19 98.2 119 59.7
HanXRQChr12g0377351 Helianthus annuus HOM05D006797 ORTHO05D007696 3.6e-18 95.1 112 57.1
Cpa.g.sc30.90 Carica papaya HOM05D006797 ORTHO05D007696 8.0e-18 94.0 104 59.6
COL.COLO4_25039 Corchorus olitorius HOM05D006797 ORTHO05D007696 1.1e-17 93.6 99 58.6
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 1.4e-17 93.2 125 56.0
Lsat_1_v5_gn_3_103300 Lactuca sativa HOM05D006797 ORTHO05D007696 1.4e-17 93.2 112 57.1
Dinv02379 Davidia involucrata HOM05D006797 ORTHO05D007696 8.9e-17 90.5 105 54.3
PSO541G4265 Papaver somniferum HOM05D006797 ORTHO05D007696 8.9e-17 90.5 119 53.8
ECA248G3234 Erigeron canadensis HOM05D006797 ORTHO05D007696 2.0e-16 89.4 113 54.0
PSO675G1942 Papaver somniferum HOM05D006797 ORTHO05D007696 2.0e-16 89.4 119 52.9
FAN16G2513 Fragaria x ananassa HOM05D006797 ORTHO05D007696 4.4e-16 88.2 115 51.3
FAN21G4013 Fragaria x ananassa HOM05D006797 ORTHO05D007696 5.8e-16 87.8 115 51.3
THA.LOC104812696 Tarenaya hassleriana HOM05D006797 ORTHO05D007696 7.5e-16 87.4 130 55.4
FAN25G1182 Fragaria x ananassa HOM05D006797 ORTHO05D007696 9.8e-16 87.0 115 51.3
MBI18_g20922_MAGBIO Magnolia biondii HOM05D006797 ORTHO05D007696 1.3e-15 86.7 99 57.6
Haze_24216 Corylus avellana HOM05D006797 ORTHO05D007696 1.7e-15 86.3 132 47.7
ATR0763G022 Amborella trichopoda HOM05D006797 ORTHO05D007696 2.2e-15 85.9 108 57.4
FvH4_3g13200 Fragaria vesca HOM05D006797 ORTHO05D007696 2.9e-15 85.5 115 50.4
FAN11G3985 Fragaria x ananassa HOM05D006797 ORTHO05D007696 2.9e-15 85.5 115 50.4
Zm00001eb071100 Zea mays HOM05D006797 ORTHO05D007696 8.3e-15 84.0 118 54.2
Zm00001eb430680 Zea mays HOM05D006797 ORTHO05D007696 1.1e-14 83.6 118 54.2
Os04g0611300 Oryza sativa ssp. japonica HOM05D006797 ORTHO05D007696 2.4e-14 82.4 119 53.8
Potri.003G155400 Populus trichocarpa HOM05D006797 ORTHO05D007696 3.2e-14 82.0 122 49.2
Zm00001eb442340 Zea mays HOM05D006797 ORTHO05D007696 5.4e-14 81.3 93 57.0
Aa31LG6G12300 Aethionema arabicum HOM05D006797 ORTHO05D007696 6.0e-13 77.8 124 53.2
unitig_37.g11921 Utricularia gibba HOM05D006797 ORTHO05D007696 1.7e-12 76.3 69 63.8
AL1G45170 Arabidopsis lyrata HOM05D006797 ORTHO05D007696 1.9e-11 72.8 123 51.2
DCAR_001265 Daucus carota HOM05D006797 ORTHO05D007696 3.3e-11 72.0 100 56.0
vmacro03563 Vaccinium macrocarpon HOM05D006797 ORTHO05D007696 9.5e-11 70.5 47 83.0
AT1G30880 Arabidopsis thaliana HOM05D006797 ORTHO05D007696 1.2e-10 70.1 123 50.4
Haze_05201 Corylus avellana HOM05D000001 ORTHO05D010268 1.6e-10 69.7 65 64.6
BcaC07g37796 Brassica carinata HOM05D006797 ORTHO05D007696 2.8e-10 68.9 120 54.2
A08p10910 Brassica napus HOM05D006797 ORTHO05D007696 2.8e-10 68.9 120 54.2
Thecc.02G002300 Theobroma cacao HOM05D006797 ORTHO05D007696 2.8e-10 68.9 68 64.7
Thhalv10009126m.g Eutrema salsugineum HOM05D006797 ORTHO05D007696 4.7e-10 68.2 123 48.0
Haze_15747 Corylus avellana HOM05D006797 ORTHO05D007696 6.2e-10 67.8 45 82.2
BraA08t33088Z Brassica rapa HOM05D006797 ORTHO05D007696 1.1e-09 67.0 122 50.8
Carub.0001s2922 Capsella rubella HOM05D006797 ORTHO05D007696 1.1e-09 67.0 121 52.1
Mapoly0051s0054 Marchantia polymorpha HOM05D006797 ORTHO05D007696 2.3e-09 65.9 129 41.9
CARHR030370 Cardamine hirsuta HOM05D006797 ORTHO05D007696 3.1e-09 65.5 124 49.2
BcaB04g18200 Brassica carinata HOM05D006797 ORTHO05D007696 4.0e-09 65.1 125 51.2
A07p09570 Brassica napus HOM05D006797 ORTHO05D007696 5.2e-09 64.7 116 50.9
BraA07t28751Z Brassica rapa HOM05D006797 ORTHO05D007696 5.2e-09 64.7 116 50.9
BcaB07g32754 Brassica carinata HOM05D006797 ORTHO05D007696 6.8e-09 64.3 123 48.0
A09p35270 Brassica napus HOM05D006797 ORTHO05D007696 1.2e-08 63.5 118 50.8
BolC7t41975H Brassica oleracea HOM05D006797 ORTHO05D007696 1.2e-08 63.5 123 48.0
Sabra03G0112800 Salix brachista HOM05D006797 ORTHO05D007696 1.5e-08 63.2 47 74.5
Sp1g26780 Schrenkiella parvula HOM05D006797 ORTHO05D007696 1.5e-08 63.2 123 49.6
BolC8t48187H Brassica oleracea HOM05D006797 ORTHO05D007696 2.0e-08 62.8 122 50.8
C07p14730 Brassica napus HOM05D006797 ORTHO05D007696 2.6e-08 62.4 123 47.2
Pp3c24_14860 Physcomitrium patens HOM05D006797 ORTHO05D007696 3.4e-08 62.0 115 42.6
BcaC05g27127 Brassica carinata HOM05D006797 ORTHO05D007696 4.4e-08 61.6 123 46.3
C05p30120 Brassica napus HOM05D006797 ORTHO05D007696 4.4e-08 61.6 123 46.3
Cfa002056 Carpinus fangiana HOM05D006797 ORTHO05D007696 7.5e-08 60.8 149 36.2
Hma1.2p1_0747F.1_g212490 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 1.3e-07 60.1 76 53.9
BraA09t39054Z Brassica rapa HOM05D006797 ORTHO05D007696 6.4e-07 57.8 124 47.6
Oeu008734.1 Olea europaea HOM05D016541 ORTHO05D007696 1.4e-06 56.6 39 79.5
Cfa001151 Carpinus fangiana HOM05D000071 ORTHO05D000029 4.1e-06 55.1 163 33.1
SMO167G0044 Selaginella moellendorffii HOM05D006797 ORTHO05D007696 5.4e-06 54.7 118 39.8


User provided reference genes

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