Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 2.0e-195 685.6 357 100.0
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 9.2e-169 597.0 447 74.0
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 6.2e-157 557.8 382 79.1
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 8.4e-146 520.8 440 66.8
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 2.4e-145 519.2 440 66.6
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 3.9e-143 511.9 444 65.8
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 5.1e-143 511.5 442 65.4
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 1.2e-139 500.4 447 64.9
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 8.4e-138 494.2 436 64.7
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 9.6e-134 480.7 367 73.6
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 2.5e-129 466.1 444 59.9
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 5.5e-129 464.9 456 59.2
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 6.1e-128 461.5 453 58.5
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 3.0e-127 459.1 459 57.7
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 4.3e-126 455.3 450 58.2
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 3.4e-123 445.7 451 56.5
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 2.9e-122 442.6 336 67.6
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 1.0e-119 434.1 457 55.6
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 6.7e-119 431.4 457 53.6
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 7.4e-118 427.9 436 57.1
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 9.7e-118 427.6 321 69.8
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 1.2e-115 420.6 452 54.4
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 1.2e-115 420.6 452 53.5
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 7.7e-115 417.9 394 60.2
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 1.3e-114 417.2 332 66.6
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 2.9e-114 416.0 453 53.9
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 3.8e-114 415.6 452 53.1
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 3.2e-113 412.5 337 63.5
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 4.2e-113 412.1 465 52.5
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 5.5e-113 411.8 341 65.7
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 3.6e-112 409.1 341 65.4
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 6.1e-112 408.3 453 53.0
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 6.1e-112 408.3 443 54.2
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 1.4e-111 407.1 438 53.9
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 1.4e-111 407.1 469 52.2
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 5.2e-111 405.2 313 66.8
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 8.8e-111 404.4 451 52.5
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 1.1e-110 404.1 460 52.6
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 5.7e-110 401.7 445 53.0
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 2.2e-109 399.8 453 51.9
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 8.2e-109 397.9 446 52.7
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 1.4e-108 397.1 448 54.2
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 3.1e-108 396.0 453 51.4
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 9.1e-108 394.4 451 51.0
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 1.6e-107 393.7 453 51.2
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 2.6e-107 392.9 424 53.1
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 5.9e-107 391.7 454 50.7
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.7e-106 390.2 252 79.0
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 2.2e-106 389.8 454 50.7
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 2.9e-106 389.4 454 50.4
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 1.9e-105 386.7 455 51.0
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 1.9e-105 386.7 458 51.3
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 2.5e-105 386.3 452 50.7
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 7.2e-105 384.8 455 50.8
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 6.1e-104 381.7 446 50.2
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 1.0e-103 380.9 340 60.6
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 2.3e-103 379.8 471 50.3
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 5.7e-102 375.2 471 48.6
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 9.7e-102 374.4 327 61.8
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 9.7e-102 374.4 462 50.4
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.7e-101 373.6 463 50.3
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 2.8e-101 372.9 453 49.0
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 6.3e-101 371.7 343 60.1
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 8.2e-101 371.3 462 50.0
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 8.2e-101 371.3 321 62.6
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 1.1e-100 370.9 346 59.0
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 2.4e-100 369.8 455 48.8
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 4.1e-100 369.0 439 49.2
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 9.1e-100 367.9 448 50.0
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 2.7e-99 366.3 394 53.0
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 1.0e-98 364.4 456 49.1
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 1.3e-98 364.0 448 49.1
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 1.9e-97 360.1 449 49.0
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 5.5e-97 358.6 337 56.7
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 7.2e-97 358.2 337 58.8
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 9.4e-97 357.8 461 48.6
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 1.8e-95 353.6 447 48.8
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 2.3e-95 353.2 441 49.7
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 5.2e-95 352.1 442 49.8
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 5.2e-95 352.1 434 47.5
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 1.5e-94 350.5 373 53.9
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 3.4e-94 349.4 447 48.3
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 9.8e-94 347.8 454 48.0
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 1.7e-93 347.1 451 48.1
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 8.3e-93 344.7 454 47.4
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 2.9e-90 336.3 340 54.1
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 1.2e-86 324.3 450 45.1
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 1.2e-86 324.3 404 48.3
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 1.1e-81 307.8 325 53.2
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 2.8e-80 303.1 407 46.4
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 2.8e-80 303.1 391 47.8
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 1.4e-79 300.8 270 61.5
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 2.3e-79 300.1 513 39.6
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 2.4e-76 290.0 276 55.4
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 2.5e-73 280.0 419 40.3
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 1.5e-70 270.8 343 47.5
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 9.8e-70 268.1 465 40.4
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 2.2e-69 266.9 466 39.5
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 3.0e-66 256.5 178 70.8
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 4.6e-59 232.6 316 46.2
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 1.1e-57 228.0 313 43.5
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 8.9e-55 218.4 176 69.3
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 2.0e-54 217.2 220 50.5
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 3.0e-50 203.4 212 57.1
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.7e-37 161.0 390 34.1
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.6e-32 144.4 172 47.7
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 6.5e-13 79.3 60 58.3
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 6.5e-13 79.3 70 52.9
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 4.2e-12 76.6 46 76.1
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 6.3e-08 62.8 66 48.5


User provided reference genes

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