Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G181700 Phaseolus vulgaris HOM05D000963 ORTHO05D010073 4.7e-38 160.6 76 100.0
arahy.Tifrunner.gnm1.ann1.W1SKJ5 Arachis hypogaea HOM05D000963 ORTHO05D013225 2.5e-23 111.7 81 70.4
Gohir.A04G039240 Gossypium hirsutum HOM05D000963 ORTHO05D010073 2.5e-23 111.7 81 70.4
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 2.5e-23 111.7 81 70.4
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 2.5e-23 111.7 81 70.4
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 2.5e-23 111.7 81 70.4
Gohir.1Z056500 Gossypium hirsutum HOM05D000963 ORTHO05D010073 7.3e-23 110.2 81 69.1
Medtr4g451295 Medicago truncatula HOM05D000963 ORTHO05D010073 9.5e-23 109.8 81 69.1
SEGI_01254 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 3.6e-22 107.8 81 65.4
Hma1.2p1_0431F.1_g151580 Hydrangea macrophylla HOM05D000963 ORTHO05D010073 6.2e-22 107.1 81 66.7
Gohir.1Z049892 Gossypium hirsutum HOM05D000963 ORTHO05D010073 1.1e-21 106.3 66 75.8
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 2.3e-21 105.1 81 66.7
Medtr4g006070 Medicago truncatula HOM05D000963 ORTHO05D010073 2.6e-20 101.7 64 75.0
Gohir.D04G096660 Gossypium hirsutum HOM05D000963 ORTHO05D010073 3.4e-20 101.3 81 65.4
EL10Ac4g08799 Beta vulgaris HOM05D000963 ORTHO05D010073 9.2e-18 93.2 71 64.8
Sopen11g020210 Solanum pennellii HOM05D000963 ORTHO05D013225 1.6e-17 92.4 73 64.4
FAN13G1378 Fragaria x ananassa HOM05D000963 ORTHO05D010073 2.7e-17 91.7 71 66.2
Gorai.007G326100 Gossypium raimondii HOM05D000963 ORTHO05D010073 5.1e-16 87.4 68 64.7
arahy.Tifrunner.gnm1.ann1.F7VFKS Arachis hypogaea HOM05D000963 ORTHO05D010073 1.6e-14 82.4 63 65.1
LjContig00319g0016523 Lotus japonicus HOM05D000963 ORTHO05D010073 8.1e-14 80.1 81 56.8
TPR.G13983 Trifolium pratense HOM05D000963 ORTHO05D010073 1.1e-13 79.7 56 67.9
Migut.D01381 Erythranthe guttata HOM05D000963 ORTHO05D010073 2.4e-13 78.6 56 69.6
Gorai.005G170500 Gossypium raimondii HOM05D000963 ORTHO05D010073 2.4e-13 78.6 65 58.5
Medtr1g039020 Medicago truncatula HOM05D000963 ORTHO05D010073 5.2e-13 77.4 49 73.5
Gohir.A12G138580 Gossypium hirsutum HOM05D000963 ORTHO05D010073 2.9e-11 71.6 81 53.1
Medtr4g076920 Medicago truncatula HOM05D008922 ORTHO05D010978 3.2e-10 68.2 57 61.4
Gorai.011G106300 Gossypium raimondii HOM05D000963 ORTHO05D010073 5.4e-10 67.4 81 48.1
arahy.Tifrunner.gnm1.ann1.EF1F4B Arachis hypogaea HOM05D000963 ORTHO05D010073 7.1e-10 67.0 47 66.0
TPR.G7250 Trifolium pratense HOM05D000963 ORTHO05D026921 3.5e-09 64.7 43 67.4
Gorai.009G238500 Gossypium raimondii HOM05D000963 ORTHO05D010073 7.8e-09 63.5 81 49.4
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.0e-08 61.6 53 62.3
Sed0001563 Sechium edule HOM05D000963 ORTHO05D010073 5.1e-08 60.8 57 57.9
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 5.1e-08 60.8 57 57.9
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 5.1e-08 60.8 57 57.9
Sed0028031 Sechium edule HOM05D000963 ORTHO05D010073 5.1e-08 60.8 57 57.9
arahy.Tifrunner.gnm1.ann1.0FXL97 Arachis hypogaea HOM05D000963 ORTHO05D010073 8.7e-08 60.1 53 60.4
arahy.Tifrunner.gnm1.ann1.H38MEV Arachis hypogaea HOM05D000963 ORTHO05D010073 8.7e-08 60.1 53 60.4
CDE02G3457 Ceratophyllum demersum HOM05D000963 ORTHO05D010073 8.7e-08 60.1 53 60.4
QL10p017078 Quercus lobata HOM05D000963 ORTHO05D010073 8.7e-08 60.1 53 60.4
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 8.7e-08 60.1 53 60.4
arahy.Tifrunner.gnm1.ann1.WPV0UJ Arachis hypogaea HOM05D000963 ORTHO05D010073 3.3e-07 58.2 53 58.5
SEGI_39281 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 7.3e-07 57.0 53 58.5
Medtr4g122520 Medicago truncatula HOM05D000963 ORTHO05D010073 6.2e-06 53.9 44 59.1


User provided reference genes

Program Settings