Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 1.1e-35 152.9 83 100.0
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 1.1e-35 152.9 83 100.0
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 2.2e-25 118.6 91 75.8
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 1.1e-24 116.3 86 77.9
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 1.6e-23 112.5 90 71.1
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 6.1e-23 110.5 90 70.0
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 8.8e-22 106.7 94 63.8
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 1.5e-21 105.9 93 66.7
TPR.G13312 Trifolium pratense HOM05D006325 ORTHO05D007878 1.5e-21 105.9 94 68.1
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 2.6e-21 105.1 94 67.0
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 1.7e-20 102.4 90 64.4
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 3.7e-20 101.3 88 64.8
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 2.4e-19 98.6 102 56.9
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 3.1e-19 98.2 93 60.2
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 3.1e-19 98.2 94 58.5
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.7e-17 92.4 82 61.0
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 6.5e-17 90.5 94 60.6
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 1.1e-16 89.7 77 61.0
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 1.1e-16 89.7 92 58.7
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 1.1e-16 89.7 89 61.8
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.5e-16 89.4 78 61.5
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 3.2e-16 88.2 87 56.3
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 4.2e-16 87.8 80 63.8
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 5.5e-16 87.4 91 59.3
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 5.5e-16 87.4 89 56.2
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 9.4e-16 86.7 80 62.5
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 9.4e-16 86.7 80 62.5
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 9.4e-16 86.7 86 58.1
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.2e-15 86.3 89 55.1
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 1.2e-15 86.3 88 60.2
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.2e-15 86.3 86 57.0
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 2.1e-15 85.5 89 53.9
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 2.1e-15 85.5 86 54.7
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 3.6e-15 84.7 81 54.3
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 6.1e-15 84.0 93 54.8
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 8.0e-15 83.6 89 53.9
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 8.0e-15 83.6 89 53.9
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 4.0e-14 81.3 52 73.1
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 4.0e-14 81.3 52 73.1
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 4.0e-14 81.3 82 52.4
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 5.2e-14 80.9 90 53.3
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 6.8e-14 80.5 85 51.8
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 6.8e-14 80.5 85 51.8
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 6.8e-14 80.5 98 50.0
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 1.2e-13 79.7 52 71.2
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 1.2e-13 79.7 79 57.0
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 2.0e-13 79.0 93 49.5
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 2.0e-13 79.0 94 54.3
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 2.0e-13 79.0 83 57.8
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 2.6e-13 78.6 52 69.2
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 2.6e-13 78.6 88 50.0
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 3.4e-13 78.2 101 49.5
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 3.4e-13 78.2 80 52.5
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 3.4e-13 78.2 81 56.8
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 4.4e-13 77.8 79 58.2
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 9.8e-13 76.6 89 51.7
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 9.8e-13 76.6 78 59.0
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 9.8e-13 76.6 79 55.7
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.3e-12 76.3 78 59.0
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 1.3e-12 76.3 80 53.8
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 2.2e-12 75.5 84 54.8
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 2.8e-12 75.1 85 49.4
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 3.7e-12 74.7 83 49.4
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 4.8e-12 74.3 110 45.5
Cc00_g01980 Coffea canephora HOM05D006325 ORTHO05D007878 4.8e-12 74.3 82 54.9
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 6.3e-12 73.9 85 52.9
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 1.1e-11 73.2 101 46.5
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 2.4e-11 72.0 66 54.5
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.4e-11 72.0 80 50.0
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 3.1e-11 71.6 76 50.0
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 5.4e-11 70.9 85 48.2
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 5.4e-11 70.9 98 46.9
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 7.0e-11 70.5 102 48.0
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 7.0e-11 70.5 101 46.5
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 1.6e-10 69.3 107 44.9
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 2.7e-10 68.6 78 51.3
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 2.7e-10 68.6 83 47.0
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 4.5e-10 67.8 48 64.6
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 7.7e-10 67.0 82 48.8
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 7.7e-10 67.0 91 42.9
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 1.0e-09 66.6 79 50.6
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 1.7e-09 65.9 86 45.3
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 3.8e-09 64.7 72 51.4
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 3.8e-09 64.7 63 54.0
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 5.0e-09 64.3 81 50.6
Gohir.A06G139600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 6.5e-09 63.9 63 54.0
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 8.5e-09 63.5 48 62.5
Gohir.D06G144350 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.1e-08 63.2 63 55.6
Gorai.010G168000 Gossypium raimondii HOM05D006325 ORTHO05D007878 1.1e-08 63.2 63 55.6
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 1.5e-08 62.8 66 53.0
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 1.5e-08 62.8 66 53.0
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 1.5e-08 62.8 66 53.0
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 1.5e-08 62.8 66 53.0
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 1.9e-08 62.4 65 53.8
Duzib160G0583 Durio zibethinus HOM05D006325 ORTHO05D007878 1.9e-08 62.4 85 47.1
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 1.9e-08 62.4 64 56.2
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 2.5e-08 62.0 65 53.8
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 2.5e-08 62.0 65 53.8
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 2.5e-08 62.0 65 53.8
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 2.5e-08 62.0 65 53.8
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 3.2e-08 61.6 66 51.5
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 4.2e-08 61.2 68 54.4
COL.COLO4_31021 Corchorus olitorius HOM05D006325 ORTHO05D007878 5.5e-08 60.8 101 45.5
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 9.4e-08 60.1 65 53.8
Manes.15G124400 Manihot esculenta HOM05D006325 ORTHO05D007878 9.4e-08 60.1 57 50.9
PSO541G2396 Papaver somniferum HOM05D006325 ORTHO05D007878 9.4e-08 60.1 96 42.7
Oeu030955.1 Olea europaea HOM05D006325 ORTHO05D007878 1.2e-07 59.7 38 71.1
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 1.2e-07 59.7 83 44.6
Aqoxy4G00063 Aquilegia oxysepala HOM05D006325 ORTHO05D007878 1.6e-07 59.3 82 43.9
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 3.6e-07 58.2 57 54.4
MELO3C002763.2 Cucumis melo HOM05D006325 ORTHO05D007878 3.6e-07 58.2 80 45.0
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 4.7e-07 57.8 48 58.3
ClCG03G006550 Citrullus lanatus HOM05D006325 ORTHO05D007878 6.1e-07 57.4 83 45.8
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 8.0e-07 57.0 66 48.5
EL10Ac8g19314 Beta vulgaris HOM05D006325 ORTHO05D089745 1.8e-06 55.8 79 46.8
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 5.2e-06 54.3 39 64.1
Nn4g26622 Nelumbo nucifera HOM05D006325 ORTHO05D007878 5.2e-06 54.3 45 57.8


User provided reference genes

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