Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G178901 Phaseolus vulgaris HOM05D003235 ORTHO05D003863 6.4e-57 223.8 108 100.0
Phvul.002G192901 Phaseolus vulgaris HOM05D003235 ORTHO05D003863 3.4e-42 174.9 82 97.6
VMungo0251G3552 Vigna mungo HOM05D003235 ORTHO05D003863 1.1e-35 153.3 74 93.2
Psat1g147840 Pisum sativum HOM05D003235 ORTHO05D003863 2.4e-35 152.1 74 91.9
Glyma.05G131100 Glycine max HOM05D003235 ORTHO05D003863 3.1e-35 151.8 74 91.9
Glyma.08G085800 Glycine max HOM05D003235 ORTHO05D003863 3.1e-35 151.8 74 91.9
Phvul.002G191600 Phaseolus vulgaris HOM05D003235 ORTHO05D003863 1.5e-34 149.4 74 91.9
arahy.Tifrunner.gnm1.ann1.5A4VTA Arachis hypogaea HOM05D003235 ORTHO05D003863 2.0e-34 149.1 74 90.5
arahy.Tifrunner.gnm1.ann1.MB0JZI Arachis hypogaea HOM05D003235 ORTHO05D003863 2.0e-34 149.1 74 90.5
Ca_02021_v3 Cicer arietinum L. HOM05D003235 ORTHO05D003863 2.0e-34 149.1 74 90.5
Ca_25919_v3 Cicer arietinum L. HOM05D003235 ORTHO05D003863 2.0e-34 149.1 74 90.5
Lj6g0023552 Lotus japonicus HOM05D003235 ORTHO05D003863 2.6e-34 148.7 74 89.2
Migut.N01350 Erythranthe guttata HOM05D003235 ORTHO05D003863 4.5e-34 147.9 74 90.5
SalBow5G2197 Salvia bowleyana HOM05D003235 ORTHO05D003863 7.6e-34 147.1 74 90.5
SalBow5G2974 Salvia bowleyana HOM05D003235 ORTHO05D003863 7.6e-34 147.1 74 90.5
SGA_v2.0_scaffold98G29294 Striga asiatica HOM05D003235 ORTHO05D003863 7.6e-34 147.1 74 90.5
Lalb_Chr20g0114201 Lupinus albus HOM05D003235 ORTHO05D003863 1.0e-33 146.7 74 89.2
Lsat_1_v5_gn_7_116021 Lactuca sativa HOM05D003235 ORTHO05D003863 1.3e-33 146.4 74 89.2
Lsat_1_v5_gn_8_120260 Lactuca sativa HOM05D003235 ORTHO05D003863 1.3e-33 146.4 74 87.8
Sabra09G0111000 Salix brachista HOM05D003235 ORTHO05D003863 1.3e-33 146.4 74 89.2
Lalb_Chr15g0083901 Lupinus albus HOM05D003235 ORTHO05D003863 1.7e-33 146.0 74 89.2
Manes.11G106900 Manihot esculenta HOM05D003235 ORTHO05D003863 1.7e-33 146.0 74 89.2
Atru.chr5.3499 Acer truncatum HOM05D003235 ORTHO05D003863 2.2e-33 145.6 74 89.2
CSS0024694 Camellia sinensis var. sinensis HOM05D003235 ORTHO05D003863 2.2e-33 145.6 74 89.2
Cpa.g.sc20.187 Carica papaya HOM05D003235 ORTHO05D003863 2.2e-33 145.6 74 89.2
Oeu051847.1 Olea europaea HOM05D003235 ORTHO05D003863 2.2e-33 145.6 74 89.2
CiPaw.05G089800 Carya illinoinensis HOM05D003235 ORTHO05D003863 2.9e-33 145.2 74 89.2
QL11p054430 Quercus lobata HOM05D003235 ORTHO05D003863 2.9e-33 145.2 74 87.8
QL11p054583 Quercus lobata HOM05D003235 ORTHO05D003863 2.9e-33 145.2 74 87.8
Solyc08g082340.3 Solanum lycopersicum HOM05D003235 ORTHO05D003863 2.9e-33 145.2 74 87.8
Sopen08g030600 Solanum pennellii HOM05D003235 ORTHO05D003863 2.9e-33 145.2 74 87.8
TPR.G31486 Trifolium pratense HOM05D003235 ORTHO05D003863 2.9e-33 145.2 74 89.2
Actinidia20561 Actinidia chinensis HOM05D003235 ORTHO05D003863 3.8e-33 144.8 74 89.2
Actinidia26336 Actinidia chinensis HOM05D003235 ORTHO05D003863 3.8e-33 144.8 74 89.2
Actinidia32018 Actinidia chinensis HOM05D003235 ORTHO05D003863 3.8e-33 144.8 74 89.2
Cc08_g00700 Coffea canephora HOM05D003235 ORTHO05D003863 3.8e-33 144.8 74 89.2
Cc09_g10610 Coffea canephora HOM05D003235 ORTHO05D003863 3.8e-33 144.8 74 89.2
COL.COLO4_24688 Corchorus olitorius HOM05D003235 ORTHO05D003863 3.8e-33 144.8 74 89.2
Dinv14158 Davidia involucrata HOM05D003235 ORTHO05D003863 3.8e-33 144.8 74 89.2
Glyma.09G119200 Glycine max HOM05D003235 ORTHO05D003863 3.8e-33 144.8 74 89.2
Manes.04G065100 Manihot esculenta HOM05D003235 ORTHO05D003863 3.8e-33 144.8 74 89.2
Rhsim05G0048800 Rhododendron simsii HOM05D003235 ORTHO05D003863 3.8e-33 144.8 74 89.2
RcHm_v2.0_Chr6g0280151 Rosa chinensis HOM05D003235 ORTHO05D003863 3.8e-33 144.8 74 87.8
vmacro09726 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 3.8e-33 144.8 74 89.2
VMungo1215G3112 Vigna mungo HOM05D003235 ORTHO05D003863 3.8e-33 144.8 74 89.2
HanXRQChr11g0335221 Helianthus annuus HOM05D003235 ORTHO05D003863 5.0e-33 144.4 74 87.8
Potri.004G183300 Populus trichocarpa HOM05D003235 ORTHO05D003863 5.0e-33 144.4 74 87.8
CAN.G1804.1 Capsicum annuum HOM05D003235 ORTHO05D003863 6.5e-33 144.1 74 86.5
Phvul.003G022900 Phaseolus vulgaris HOM05D003235 ORTHO05D003863 6.5e-33 144.1 74 87.8
Rhsim11G0196500 Rhododendron simsii HOM05D003235 ORTHO05D003863 6.5e-33 144.1 74 87.8
Potri.009G143200 Populus trichocarpa HOM05D003235 ORTHO05D003863 8.5e-33 143.7 74 87.8
Thecc.02G046900 Theobroma cacao HOM05D003235 ORTHO05D003863 8.5e-33 143.7 74 87.8
COL.COLO4_17945 Corchorus olitorius HOM05D003235 ORTHO05D003863 1.1e-32 143.3 72 90.3
Gohir.A04G125200 Gossypium hirsutum HOM05D003235 ORTHO05D003863 1.1e-32 143.3 74 86.5
Gohir.D04G170000 Gossypium hirsutum HOM05D003235 ORTHO05D003863 1.1e-32 143.3 74 86.5
Gorai.012G158300 Gossypium raimondii HOM05D003235 ORTHO05D003863 1.1e-32 143.3 74 86.5
Lj9A405T66 Lonicera japonica HOM05D003235 ORTHO05D003863 1.1e-32 143.3 74 89.2
Medtr4g127910 Medicago truncatula HOM05D003235 ORTHO05D003863 1.1e-32 143.3 74 87.8
Nitab4.5_0000783g0290 Nicotiana tabacum HOM05D003235 ORTHO05D003863 1.1e-32 143.3 74 86.5
MSTRG.27622 Avicennia marina HOM05D003235 ORTHO05D003863 1.4e-32 142.9 74 87.8
CAN.G1235.15 Capsicum annuum HOM05D003235 ORTHO05D003863 1.4e-32 142.9 74 86.5
Haze_02042 Corylus avellana HOM05D003235 ORTHO05D003863 1.4e-32 142.9 74 87.8
Eucgr.I01507 Eucalyptus grandis HOM05D003235 ORTHO05D003863 1.4e-32 142.9 74 87.8
Peaxi162Scf00362g00250 Petunia axillaris HOM05D003235 ORTHO05D003863 1.4e-32 142.9 74 86.5
GSVIVG01023935001 Vitis vinifera HOM05D003235 ORTHO05D003863 1.4e-32 142.9 74 87.8
Duzib248G1500 Durio zibethinus HOM05D003235 ORTHO05D003863 1.9e-32 142.5 74 87.8
FAN08G2058 Fragaria x ananassa HOM05D003235 ORTHO05D003863 1.9e-32 142.5 74 86.5
PGSC0003DMG400012284 Solanum tuberosum HOM05D003235 ORTHO05D003863 1.9e-32 142.5 74 86.5
CANSAT11G0145 Cannabis sativa HOM05D003235 ORTHO05D003863 2.5e-32 142.1 74 86.5
Ciclev10028672m.g Citrus clementina HOM05D003235 ORTHO05D003863 2.5e-32 142.1 74 86.5
ECA233G5747 Erigeron canadensis HOM05D003235 ORTHO05D003863 2.5e-32 142.1 74 85.1
ECA236G3279 Erigeron canadensis HOM05D003235 ORTHO05D003863 2.5e-32 142.1 74 86.5
TWI31G0863 Tripterygium wilfordii HOM05D003235 ORTHO05D003863 2.5e-32 142.1 74 86.5
TWI79G1341 Tripterygium wilfordii HOM05D003235 ORTHO05D003863 2.5e-32 142.1 74 86.5
vmacro20582 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 2.5e-32 142.1 74 86.5
CiPaw.06G117700 Carya illinoinensis HOM05D003235 ORTHO05D003863 3.2e-32 141.7 74 87.8
Prupe.8G176600 Prunus persica HOM05D003235 ORTHO05D003863 3.2e-32 141.7 74 85.1
unitig_749.g13984 Utricularia gibba HOM05D003235 ORTHO05D003863 3.2e-32 141.7 74 89.2
DCAR_015672 Daucus carota HOM05D003235 ORTHO05D003863 4.2e-32 141.4 74 86.5
Gohir.D02G230900 Gossypium hirsutum HOM05D003235 ORTHO05D003863 4.2e-32 141.4 74 86.5
Gorai.005G258500 Gossypium raimondii HOM05D003235 ORTHO05D003863 4.2e-32 141.4 74 86.5
MD00G1083900 Malus domestica HOM05D003235 ORTHO05D003863 4.2e-32 141.4 74 85.1
Medtr2g438210 Medicago truncatula HOM05D003235 ORTHO05D003863 4.2e-32 141.4 72 88.9
Hund00347 Selenicereus undatus HOM05D003235 ORTHO05D003863 5.5e-32 141.0 74 85.1
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 5.5e-32 141.0 74 86.5
PGR142G4436 Punica granatum HOM05D003235 ORTHO05D003863 9.3e-32 140.2 74 86.5
MBI18_g41996_MAGBIO Magnolia biondii HOM05D003235 ORTHO05D003863 1.2e-31 139.8 74 86.5
QL10p000641 Quercus lobata HOM05D003235 ORTHO05D003863 1.2e-31 139.8 74 85.1
arahy.Tifrunner.gnm1.ann1.0G9KRE Arachis hypogaea HOM05D003235 ORTHO05D003863 2.1e-31 139.0 79 81.0
arahy.Tifrunner.gnm1.ann1.S5QGNM Arachis hypogaea HOM05D003235 ORTHO05D003863 2.1e-31 139.0 79 81.0
FvH4_2g16380 Fragaria vesca HOM05D003235 ORTHO05D003863 2.1e-31 139.0 74 83.8
FAN15G0986 Fragaria x ananassa HOM05D003235 ORTHO05D003863 2.1e-31 139.0 74 83.8
FAN24G0538 Fragaria x ananassa HOM05D003235 ORTHO05D003863 2.1e-31 139.0 74 83.8
FAN24G1371 Fragaria x ananassa HOM05D003235 ORTHO05D003863 2.1e-31 139.0 74 83.8
MD10G1138100 Malus domestica HOM05D003235 ORTHO05D003863 2.1e-31 139.0 74 83.8
CDE11G0005 Ceratophyllum demersum HOM05D003235 ORTHO05D003863 2.7e-31 138.7 74 85.1
Aqoxy7G01395 Aquilegia oxysepala HOM05D003235 ORTHO05D003863 3.6e-31 138.3 74 86.5
CDE05G0254 Ceratophyllum demersum HOM05D003235 ORTHO05D003863 3.6e-31 138.3 74 85.1
Gohir.A03G209200 Gossypium hirsutum HOM05D003235 ORTHO05D003863 4.6e-31 137.9 74 85.1
Aqoxy4G02019 Aquilegia oxysepala HOM05D003235 ORTHO05D003863 6.1e-31 137.5 74 83.8
BcaNung00615 Brassica carinata HOM05D003235 ORTHO05D003863 6.1e-31 137.5 74 81.1
BcaNung00616 Brassica carinata HOM05D003235 ORTHO05D003863 6.1e-31 137.5 74 81.1
A01p03310 Brassica napus HOM05D003235 ORTHO05D003863 6.1e-31 137.5 74 81.1
C01p03650 Brassica napus HOM05D003235 ORTHO05D003863 6.1e-31 137.5 74 81.1
BolC1t00356H Brassica oleracea HOM05D003235 ORTHO05D003863 6.1e-31 137.5 74 81.1
BraA01t00316Z Brassica rapa HOM05D003235 ORTHO05D003863 6.1e-31 137.5 74 81.1
FvH4_5g27680 Fragaria vesca HOM05D003235 ORTHO05D003863 6.1e-31 137.5 74 85.1
FAN18G1267 Fragaria x ananassa HOM05D003235 ORTHO05D003863 6.1e-31 137.5 74 85.1
TAR627G1023 Trochodendron aralioides HOM05D003235 ORTHO05D003863 6.1e-31 137.5 72 87.5
Ah.01g007750 Amaranthus hybridus HOM05D003235 ORTHO05D003863 1.0e-30 136.7 74 82.4
Ah.01g023630 Amaranthus hybridus HOM05D003235 ORTHO05D003863 1.0e-30 136.7 74 81.1
Aqoxy2G01314 Aquilegia oxysepala HOM05D003235 ORTHO05D003863 1.0e-30 136.7 97 69.1
AUR62012940 Chenopodium quinoa HOM05D003235 ORTHO05D003863 1.0e-30 136.7 74 82.4
FAN27G1339 Fragaria x ananassa HOM05D003235 ORTHO05D003863 1.0e-30 136.7 74 82.4
PSO541G0846 Papaver somniferum HOM05D003235 ORTHO05D003863 1.0e-30 136.7 74 82.4
Phvul.002G192000 Phaseolus vulgaris HOM05D003235 ORTHO05D003863 1.0e-30 136.7 74 85.1
RhsimUnG0142800 Rhododendron simsii HOM05D003235 ORTHO05D003863 1.4e-30 136.3 68 91.2
SHI05839 Sapria himalayana HOM05D003235 ORTHO05D003863 1.4e-30 136.3 74 81.1
Sp7g33030 Schrenkiella parvula HOM05D003235 ORTHO05D003863 1.4e-30 136.3 74 79.7
PGSC0003DMG400018636 Solanum tuberosum HOM05D003235 ORTHO05D003863 1.4e-30 136.3 72 83.3
AT5G60620 Arabidopsis thaliana HOM05D003235 ORTHO05D003863 1.8e-30 136.0 74 81.1
ClCG02G003570 Citrullus lanatus HOM05D003235 ORTHO05D003863 2.3e-30 135.6 74 83.8
MELO3C013265.2 Cucumis melo HOM05D003235 ORTHO05D003863 2.3e-30 135.6 74 83.8
CsaV3_7G001740 Cucumis sativus L. HOM05D003235 ORTHO05D003863 2.3e-30 135.6 74 83.8
Sed0009233 Sechium edule HOM05D003235 ORTHO05D003863 2.3e-30 135.6 74 83.8
PSO675G5274 Papaver somniferum HOM05D003235 ORTHO05D003863 6.7e-30 134.0 74 81.1
PGR042G2488 Punica granatum HOM05D003235 ORTHO05D003863 6.7e-30 134.0 80 75.0
Hund17321 Selenicereus undatus HOM05D003235 ORTHO05D003863 6.7e-30 134.0 74 79.7
MBI02_g34309_MAGBIO Magnolia biondii HOM05D003235 ORTHO05D003863 8.8e-30 133.7 74 82.4
BcaB08g36361 Brassica carinata HOM05D003235 ORTHO05D003863 1.1e-29 133.3 74 79.7
BcaC04g19724 Brassica carinata HOM05D003235 ORTHO05D003863 1.1e-29 133.3 74 79.7
A10p17830 Brassica napus HOM05D003235 ORTHO05D003863 1.1e-29 133.3 74 79.7
C09p53360 Brassica napus HOM05D003235 ORTHO05D003863 1.1e-29 133.3 74 79.7
BolC9t58209H Brassica oleracea HOM05D003235 ORTHO05D003863 1.1e-29 133.3 74 79.7
BraA10t43862Z Brassica rapa HOM05D003235 ORTHO05D003863 1.1e-29 133.3 74 79.7
Carub.0008s2130 Capsella rubella HOM05D003235 ORTHO05D003863 1.1e-29 133.3 74 79.7
Thhalv10013846m.g Eutrema salsugineum HOM05D003235 ORTHO05D003863 1.1e-29 133.3 74 79.7
RcHm_v2.0_Chr7g0219331 Rosa chinensis HOM05D003235 ORTHO05D003863 1.1e-29 133.3 81 77.8
Sed0003744 Sechium edule HOM05D003235 ORTHO05D003863 1.1e-29 133.3 74 82.4
AL8G37210 Arabidopsis lyrata HOM05D003235 ORTHO05D003863 1.5e-29 132.9 74 79.7
CARHR274300 Cardamine hirsuta HOM05D003235 ORTHO05D003863 1.5e-29 132.9 74 79.7
THA.LOC104819684 Tarenaya hassleriana HOM05D003235 ORTHO05D003863 1.9e-29 132.5 74 78.4
HanXRQChr14g0458991 Helianthus annuus HOM05D003235 ORTHO05D003863 3.3e-29 131.7 74 79.7
Aa31LG2G14790 Aethionema arabicum HOM05D003235 ORTHO05D003863 4.3e-29 131.3 73 80.8
Sp6g22200 Schrenkiella parvula HOM05D003235 ORTHO05D003863 4.3e-29 131.3 74 78.4
EL10Ac9g21270 Beta vulgaris HOM05D003235 ORTHO05D003863 1.3e-28 129.8 85 72.9
Mapoly0005s0123 Marchantia polymorpha HOM05D003235 ORTHO05D003863 2.2e-28 129.0 77 75.3
Os07g0531600 Oryza sativa ssp. japonica HOM05D003235 ORTHO05D003863 2.8e-28 128.6 74 75.7
EL10Ac3g05050 Beta vulgaris HOM05D003235 ORTHO05D003863 3.7e-28 128.3 96 65.6
ATR1159G019 Amborella trichopoda HOM05D003235 ORTHO05D003863 4.8e-28 127.9 74 75.7
THA.LOC104807394 Tarenaya hassleriana HOM05D003235 ORTHO05D003863 6.3e-28 127.5 74 77.0
HPP92_011716 Vanilla planifolia HOM05D003235 ORTHO05D003863 1.1e-27 126.7 74 77.0
CBR_g30644 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-27 126.3 77 70.1
HPP92_017619 Vanilla planifolia HOM05D003235 ORTHO05D003863 1.4e-27 126.3 74 77.0
vmacro17286 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 2.4e-27 125.6 85 70.6
Eucgr.G01836 Eucalyptus grandis HOM05D003235 ORTHO05D003863 6.9e-27 124.0 74 75.7
Zm00001eb396350 Zea mays HOM05D003235 ORTHO05D003863 6.9e-27 124.0 74 73.0
AagrBONN_evm.TU.Sc2ySwM_344.5027 Anthoceros agrestis HOM05D003235 ORTHO05D003863 9.1e-27 123.6 75 70.7
Pp3c11_26030 Physcomitrium patens HOM05D003235 ORTHO05D003863 9.1e-27 123.6 74 73.0
Eucgr.G01837 Eucalyptus grandis HOM05D003235 ORTHO05D003863 1.2e-26 123.2 78 69.2
EL10Ac3g05833 Beta vulgaris HOM05D003235 ORTHO05D003863 5.9e-26 120.9 65 83.1
SMO164G0177 Selaginella moellendorffii HOM05D003235 ORTHO05D003863 2.2e-25 119.0 77 68.8
EL10Ac3g05834 Beta vulgaris HOM05D003235 ORTHO05D003863 5.0e-25 117.9 65 81.5
Phvul.002G192600 Phaseolus vulgaris HOM05D003235 ORTHO05D017489 4.7e-23 111.3 74 73.0
MCO05G004 Micromonas commoda HOM05D003235 ORTHO05D003863 1.0e-22 110.2 80 60.0
MBI02_g46599_MAGBIO Magnolia biondii HOM05D003235 ORTHO05D003863 5.1e-22 107.8 57 84.2
Pp3c14_5980 Physcomitrium patens HOM05D003235 ORTHO05D003863 5.1e-22 107.8 74 67.6
Cc08_g00720 Coffea canephora HOM05D003235 ORTHO05D003863 4.2e-16 88.2 79 60.8
Cre06.g273250 Chlamydomonas reinhardtii HOM05D003235 ORTHO05D003863 4.7e-15 84.7 63 57.1
AL6G10680 Arabidopsis lyrata HOM05D003235 ORTHO05D015367 2.3e-14 82.4 75 56.0
AL8G18960 Arabidopsis lyrata HOM05D003235 ORTHO05D015367 2.3e-14 82.4 75 56.0
FAN04G0585 Fragaria x ananassa HOM05D003235 ORTHO05D003863 3.0e-14 82.0 40 87.5
FAN13G0036 Fragaria x ananassa HOM05D003235 ORTHO05D003863 3.9e-14 81.6 41 85.4
Nn1g03654 Nelumbo nucifera HOM05D003235 ORTHO05D003863 5.2e-14 81.3 41 85.4
HanXRQChr08g0236381 Helianthus annuus HOM05D003235 ORTHO05D003863 1.5e-13 79.7 43 83.7
Mapoly0113s0056 Marchantia polymorpha HOM05D003235 ORTHO05D003863 6.3e-12 74.3 41 80.5
PRCOL_00006733 Prasinoderma coloniale HOM05D003235 ORTHO05D003863 3.1e-11 72.0 102 42.2
vmacro02324 Vaccinium macrocarpon HOM05D003235 ORTHO05D003863 5.3e-11 71.2 40 75.0
RhsimUnG0171100 Rhododendron simsii HOM05D003235 ORTHO05D003863 1.7e-09 66.2 31 90.3
SGA_v2.0_scaffold80G25821 Striga asiatica HOM05D003235 ORTHO05D003863 6.5e-09 64.3 34 79.4
AUR62027140 Chenopodium quinoa HOM05D003235 ORTHO05D003863 1.9e-08 62.8 36 72.2
QL10p050755 Quercus lobata HOM05D001043 ORTHO05D006432 2.7e-07 58.9 40 67.5
TPR.G40684 Trifolium pratense HOM05D003235 ORTHO05D003863 2.3e-06 55.8 44 61.4


User provided reference genes

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