Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.9e-141 505.8 247 100.0
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 1.2e-119 433.3 240 87.1
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 2.2e-113 412.5 240 83.8
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 2.7e-111 405.6 246 80.9
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 6.5e-97 357.8 237 71.3
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 3.0e-94 349.0 237 70.0
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 3.4e-93 345.5 250 70.0
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 6.3e-92 341.3 236 69.1
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 3.5e-90 335.5 237 65.8
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 5.0e-89 331.6 250 67.2
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 5.0e-89 331.6 250 66.8
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 6.5e-89 331.3 239 68.2
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 1.1e-88 330.5 244 65.6
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.9e-88 329.7 247 65.6
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 2.5e-88 329.3 237 67.5
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 7.2e-88 327.8 237 68.8
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 1.8e-86 323.2 244 64.8
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 1.7e-84 316.6 241 66.0
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 4.1e-83 312.0 244 63.5
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 9.1e-83 310.8 244 62.7
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 4.9e-76 288.5 247 55.9
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 3.2e-75 285.8 236 57.2
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 2.0e-74 283.1 238 56.3
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 2.7e-74 282.7 237 56.1
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 9.5e-72 274.2 241 52.3
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 3.6e-71 272.3 238 55.9
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 6.1e-71 271.6 215 59.5
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 2.3e-70 269.6 232 56.0
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 5.2e-70 268.5 221 57.9
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.2e-69 267.3 250 52.4
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 2.0e-69 266.5 236 54.7
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.4e-69 265.8 235 56.2
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 5.8e-69 265.0 232 55.2
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.3e-68 263.8 239 52.7
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 2.2e-68 263.1 220 56.8
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.9e-68 262.7 234 56.0
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 4.9e-68 261.9 234 53.0
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 8.3e-68 261.2 234 56.0
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 8.3e-68 261.2 181 70.2
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.1e-67 260.8 234 55.6
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 7.0e-67 258.1 234 55.6
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 1.2e-66 257.3 234 53.0
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 1.0e-65 254.2 245 53.1
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 1.0e-65 254.2 215 55.8
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 1.0e-65 254.2 222 55.0
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.3e-65 253.8 223 55.6
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 1.7e-65 253.4 237 54.4
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 8.6e-65 251.1 218 56.0
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.5e-64 250.4 215 54.4
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 2.5e-64 249.6 223 54.7
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 2.5e-64 249.6 187 62.6
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 7.3e-64 248.1 210 55.2
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 7.3e-64 248.1 234 50.9
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 1.2e-63 247.3 217 54.4
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 2.1e-63 246.5 223 53.4
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 3.6e-63 245.7 238 50.4
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 5.2e-62 241.9 211 54.0
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 8.9e-62 241.1 223 52.5
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 1.4e-59 233.8 241 46.5
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.9e-59 233.4 234 45.3
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 7.1e-59 231.5 216 53.7
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 9.2e-59 231.1 223 49.8
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 9.2e-59 231.1 237 43.9
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 1.5e-56 223.8 238 49.2
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 1.6e-55 220.3 226 46.0
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 8.1e-55 218.0 244 45.5
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 6.8e-54 214.9 199 52.3
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 1.2e-53 214.2 223 47.1
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 3.4e-53 212.6 218 49.5
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 4.4e-53 212.2 238 45.8
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 1.7e-52 210.3 233 45.5
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 4.1e-51 205.7 238 43.3
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 2.1e-50 203.4 234 45.3
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 1.3e-49 200.7 231 45.0
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 5.1e-49 198.7 226 44.7
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 1.1e-48 197.6 242 44.2
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.8e-47 193.0 220 38.6
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 1.1e-46 191.0 157 58.0
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 6.4e-44 181.8 220 38.6
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 9.3e-43 177.9 221 37.1
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 9.3e-43 177.9 217 41.5
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 3.5e-42 176.0 174 50.6
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 5.1e-41 172.2 247 38.5
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 9.6e-32 141.4 174 43.7
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 1.4e-30 137.5 152 44.1
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 2.4e-30 136.7 148 45.3
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 6.9e-30 135.2 81 74.1
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 7.9e-26 121.7 92 63.0
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.8e-17 94.0 96 41.7
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 6.7e-17 92.0 175 32.0
SEGI_17039 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 8.7e-09 65.1 209 25.4
SEGI_20716 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 2.4e-06 57.0 127 27.6


User provided reference genes

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