Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G174500 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 2.8e-44 181.4 83 100.0
Glyma.08G103500 Glycine max HOM05D009245 ORTHO05D011414 1.9e-32 142.1 83 78.3
Glyma.18G008000 Glycine max HOM05D009245 ORTHO05D011414 1.8e-27 125.6 83 71.1
Glyma.11G249400 Glycine max HOM05D009245 ORTHO05D011414 5.9e-26 120.6 83 68.7
Lalb_Chr11g0075731 Lupinus albus HOM05D009245 ORTHO05D011414 3.2e-24 114.8 83 63.9
Lj4g0004409 Lotus japonicus HOM05D009245 ORTHO05D011414 9.4e-24 113.2 83 65.1
arahy.Tifrunner.gnm1.ann1.6N96FM Arachis hypogaea HOM05D009245 ORTHO05D011414 3.3e-21 104.8 84 59.5
Phvul.001G260700 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 6.3e-20 100.5 85 63.5
Dinv10969 Davidia involucrata HOM05D009245 ORTHO05D011414 3.1e-19 98.2 85 58.8
Manes.12G012951 Manihot esculenta HOM05D009245 ORTHO05D011414 9.1e-19 96.7 83 54.2
CiPaw.06G101300 Carya illinoinensis HOM05D009245 ORTHO05D011414 2.0e-18 95.5 85 56.5
Prupe.1G228500 Prunus persica HOM05D009245 ORTHO05D011414 1.0e-17 93.2 83 55.4
TPR.G17065 Trifolium pratense HOM05D009245 ORTHO05D011414 1.5e-16 89.4 69 60.9
Thecc.02G212200 Theobroma cacao HOM05D009245 ORTHO05D011414 1.9e-16 89.0 83 48.2
GSVIVG01010444001 Vitis vinifera HOM05D009245 ORTHO05D011414 1.9e-16 89.0 82 51.2
Psat5g094920 Pisum sativum HOM05D000667 ORTHO05D003843 2.1e-15 85.5 69 58.0
CiPaw.05G111800 Carya illinoinensis HOM05D009245 ORTHO05D011414 3.6e-15 84.7 54 68.5
Migut.K00714 Erythranthe guttata HOM05D009245 ORTHO05D011414 3.0e-14 81.6 87 52.9
Atru.chr11.2306 Acer truncatum HOM05D009245 ORTHO05D011414 1.2e-13 79.7 83 50.6
Potri.013G104350 Populus trichocarpa HOM05D009245 ORTHO05D011414 1.5e-13 79.3 83 49.4
ClCG08G010130 Citrullus lanatus HOM05D009245 ORTHO05D011414 3.4e-13 78.2 45 73.3
CSS0013160 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 9.8e-13 76.6 58 58.6
CSS0041114 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 9.8e-13 76.6 58 58.6
Manes.13G018350 Manihot esculenta HOM05D009245 ORTHO05D011414 1.7e-12 75.9 69 53.6
Gohir.A01G155200 Gossypium hirsutum HOM05D009245 ORTHO05D011414 8.3e-12 73.6 45 68.9
Gohir.D01G154750 Gossypium hirsutum HOM05D009245 ORTHO05D011414 8.3e-12 73.6 45 68.9
CSS0003449 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 2.4e-11 72.0 48 66.7
CsaV3_6G032310 Cucumis sativus L. HOM05D009245 ORTHO05D011414 3.1e-11 71.6 45 68.9
Cc11_g16810 Coffea canephora HOM05D009245 ORTHO05D011414 1.7e-09 65.9 84 46.4
Actinidia20700 Actinidia chinensis HOM05D009245 ORTHO05D011414 2.2e-09 65.5 58 56.9
Potri.008G175950 Populus trichocarpa HOM05D009245 ORTHO05D011414 2.5e-08 62.0 83 37.3
TAR629G3142 Trochodendron aralioides HOM05D009245 ORTHO05D011414 2.3e-06 55.5 77 37.7
CAN.G550.3 Capsicum annuum HOM05D009245 ORTHO05D011414 8.8e-06 53.5 45 57.8


User provided reference genes

Program Settings