Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.1e-63 246.5 130 100.0
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 8.9e-45 183.7 131 77.9
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 7.0e-42 174.1 132 75.0
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 1.2e-38 163.3 130 71.5
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 2.2e-27 125.9 130 54.6
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 1.4e-26 123.2 127 57.5
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 8.6e-24 114.0 128 52.3
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 9.5e-23 110.5 128 57.8
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 1.2e-22 110.2 130 51.5
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 1.6e-22 109.8 135 51.1
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 8.1e-22 107.5 132 50.0
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 1.1e-21 107.1 129 50.4
TPR.G3394 Trifolium pratense HOM05D007727 ORTHO05D009078 8.9e-21 104.0 129 49.6
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 1.2e-20 103.6 130 50.8
VMungo0251G2989 Vigna mungo HOM05D007727 ORTHO05D009078 4.4e-20 101.7 136 48.5
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 7.6e-20 100.9 131 47.3
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 7.6e-20 100.9 131 47.3
TPR.G3415 Trifolium pratense HOM05D007727 ORTHO05D009078 4.9e-19 98.2 127 46.5
Medtr8g099485 Medicago truncatula HOM05D007727 ORTHO05D009078 1.1e-18 97.1 133 44.4
TPR.G25603 Trifolium pratense HOM05D007727 ORTHO05D009078 1.9e-18 96.3 124 53.2
TPR.G3425 Trifolium pratense HOM05D007727 ORTHO05D009078 1.9e-18 96.3 124 46.8
Medtr5g009290 Medicago truncatula HOM05D007727 ORTHO05D009078 7.1e-18 94.4 122 52.5
Psat2g185360 Pisum sativum HOM05D007727 ORTHO05D009078 6.6e-16 87.8 141 46.1
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 8.7e-16 87.4 121 48.8
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 2.5e-15 85.9 116 45.7
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 3.3e-15 85.5 110 48.2
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 1.3e-14 83.6 115 47.0
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 2.8e-14 82.4 118 47.5
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 3.6e-14 82.0 116 49.1
Duzib205G0888 Durio zibethinus HOM05D007727 ORTHO05D009078 4.8e-14 81.6 120 45.0
Eucgr.D01744 Eucalyptus grandis HOM05D007727 ORTHO05D009078 4.8e-14 81.6 117 47.0
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 4.8e-14 81.6 107 50.5
Medtr8g099475 Medicago truncatula HOM05D007727 ORTHO05D009078 1.8e-13 79.7 113 43.4
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 2.4e-13 79.3 103 49.5
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 3.1e-13 79.0 104 46.2
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 4.0e-13 78.6 104 44.2
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 4.0e-13 78.6 102 45.1
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 5.3e-13 78.2 104 48.1
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 5.3e-13 78.2 116 45.7
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 6.9e-13 77.8 103 45.6
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 6.9e-13 77.8 126 42.9
Prupe.5G120300 Prunus persica HOM05D007727 ORTHO05D009078 6.9e-13 77.8 107 45.8
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 9.0e-13 77.4 103 48.5
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 9.0e-13 77.4 109 50.5
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 9.0e-13 77.4 109 50.5
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 9.0e-13 77.4 109 50.5
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 9.0e-13 77.4 113 43.4
Thecc.03G298300 Theobroma cacao HOM05D007727 ORTHO05D009078 9.0e-13 77.4 120 46.7
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 1.2e-12 77.0 106 48.1
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.2e-12 77.0 111 45.9
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 1.2e-12 77.0 109 49.5
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.5e-12 76.6 103 48.5
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.5e-12 76.6 103 48.5
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.5e-12 76.6 103 48.5
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 2.0e-12 76.3 103 48.5
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 2.0e-12 76.3 103 48.5
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 3.4e-12 75.5 109 45.9
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 3.4e-12 75.5 52 69.2
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 3.4e-12 75.5 52 69.2
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 3.4e-12 75.5 109 46.8
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 4.4e-12 75.1 68 61.8
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 4.4e-12 75.1 68 61.8
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 7.6e-12 74.3 106 46.2
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 9.9e-12 73.9 109 44.0
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 9.9e-12 73.9 112 46.4
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 1.3e-11 73.6 117 43.6
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 1.7e-11 73.2 105 46.7
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 1.7e-11 73.2 46 78.3
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.7e-11 73.2 126 41.3
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 2.2e-11 72.8 114 46.5
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.9e-11 72.4 106 47.2
Gohir.A02G100000 Gossypium hirsutum HOM05D007727 ORTHO05D009078 3.8e-11 72.0 68 60.3
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 3.8e-11 72.0 108 41.7
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.1e-10 70.5 117 43.6
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.1e-10 70.5 117 43.6
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 1.1e-10 70.5 112 43.8
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.1e-10 70.5 91 50.5
MELO3C016295.2 Cucumis melo HOM05D007727 ORTHO05D009078 1.4e-10 70.1 139 36.7
CsaV3_4G006600 Cucumis sativus L. HOM05D007727 ORTHO05D009078 1.4e-10 70.1 122 41.0
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 1.9e-10 69.7 47 70.2
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 3.2e-10 68.9 113 43.4
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 3.2e-10 68.9 50 66.0
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 4.2e-10 68.6 105 45.7
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 5.4e-10 68.2 110 44.5
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 5.4e-10 68.2 89 47.2
Sed0000706 Sechium edule HOM05D007727 ORTHO05D009078 5.4e-10 68.2 116 36.2
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 7.1e-10 67.8 118 40.7
Nitab4.5_0002782g0050 Nicotiana tabacum HOM05D011491 ORTHO05D009078 3.5e-09 65.5 105 43.8
Peaxi162Scf00074g00092 Petunia axillaris HOM05D011491 ORTHO05D009078 4.6e-09 65.1 114 41.2
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 6.0e-09 64.7 47 66.0
AUR62010842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 1.7e-08 63.2 66 53.0
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 6.6e-08 61.2 117 41.0
Aa31LG6G7130 Aethionema arabicum HOM05D009622 ORTHO05D011757 1.1e-07 60.5 166 30.1
Nitab4.5_0002782g0020 Nicotiana tabacum HOM05D011491 ORTHO05D009078 1.9e-07 59.7 101 41.6
Solyc08g082380.1 Solanum lycopersicum HOM05D011491 ORTHO05D009078 1.9e-07 59.7 117 41.0
CAN.G1804.6 Capsicum annuum HOM05D011491 ORTHO05D009078 3.3e-07 58.9 121 37.2
PGSC0003DMG400012144 Solanum tuberosum HOM05D011491 ORTHO05D009078 3.3e-07 58.9 124 39.5
BcaNung04240 Brassica carinata HOM05D009622 ORTHO05D011757 5.6e-07 58.2 174 28.7
A03p54810 Brassica napus HOM05D009622 ORTHO05D011757 5.6e-07 58.2 176 28.4
C07p53170 Brassica napus HOM05D009622 ORTHO05D011757 5.6e-07 58.2 174 28.7
BolC7t45813H Brassica oleracea HOM05D009622 ORTHO05D011757 5.6e-07 58.2 174 28.7
BraA03t14548Z Brassica rapa HOM05D009622 ORTHO05D011757 5.6e-07 58.2 176 28.4
CAN.G1804.7 Capsicum annuum HOM05D011491 ORTHO05D009078 9.6e-07 57.4 121 37.2
AUR62019842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 1.6e-06 56.6 101 38.6
BcaNung01094 Brassica carinata HOM05D009622 ORTHO05D011757 2.1e-06 56.2 174 27.6
Peaxi162Scf00074g00091 Petunia axillaris HOM05D011491 ORTHO05D009078 2.1e-06 56.2 96 42.7
Sed0007502 Sechium edule HOM05D007727 ORTHO05D009078 2.1e-06 56.2 131 36.6
TAR374G1599 Trochodendron aralioides HOM05D026466 ORTHO05D009078 2.8e-06 55.8 137 34.3
BcaNung04083 Brassica carinata HOM05D009622 ORTHO05D011757 4.8e-06 55.1 174 28.2
BolC1t01837H Brassica oleracea HOM05D009622 ORTHO05D011757 6.2e-06 54.7 176 26.7
BraA01t01456Z Brassica rapa HOM05D009622 ORTHO05D011757 6.2e-06 54.7 176 26.7
ECA240G1351 Erigeron canadensis HOM05D007727 ORTHO05D009078 6.2e-06 54.7 98 39.8
Nitab4.5_0001210g0040 Nicotiana tabacum HOM05D011491 ORTHO05D009078 8.1e-06 54.3 47 59.6


User provided reference genes

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