Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 5.8e-175 617.5 315 100.0
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 2.7e-156 555.4 317 90.9
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 3.9e-147 525.0 332 83.7
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 2.4e-144 515.8 323 82.7
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 5.5e-141 504.6 332 81.6
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 3.0e-139 498.8 316 81.6
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 4.4e-130 468.4 315 77.1
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 5.0e-126 454.9 446 58.5
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 6.5e-126 454.5 330 74.8
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 3.6e-124 448.7 410 62.9
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 2.2e-121 439.5 415 61.7
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 6.3e-121 438.0 377 64.7
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 1.7e-113 413.3 315 69.8
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 7.8e-111 404.4 317 66.9
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 6.6e-110 401.4 369 61.5
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.5e-109 400.2 319 67.1
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.5e-109 400.2 320 67.5
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 3.3e-109 399.1 319 66.8
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 1.2e-106 390.6 322 65.2
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 1.5e-106 390.2 324 64.2
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 4.4e-106 388.7 315 65.4
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 5.7e-106 388.3 317 67.5
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 9.8e-106 387.5 333 63.7
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 4.9e-105 385.2 434 52.3
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 1.1e-104 384.0 318 64.8
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 1.8e-104 383.3 481 50.5
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 7.8e-103 377.9 324 63.3
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 6.6e-102 374.8 326 62.9
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 9.5e-101 370.9 324 63.0
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 1.6e-100 370.2 425 53.6
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 2.1e-100 369.8 324 63.0
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 6.2e-100 368.2 319 61.8
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 1.8e-99 366.7 426 51.6
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 2.6e-98 362.8 319 62.7
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 9.8e-98 360.9 316 62.0
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 1.7e-97 360.1 317 60.9
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 1.7e-97 360.1 347 57.9
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 2.9e-97 359.4 344 58.4
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 6.4e-97 358.2 456 48.5
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 1.9e-96 356.7 428 51.6
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 2.4e-96 356.3 366 54.9
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 7.8e-95 351.3 382 53.1
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 1.0e-94 350.9 426 50.0
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 1.0e-94 350.9 366 56.0
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 1.7e-94 350.1 434 48.4
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 3.9e-94 349.0 413 50.6
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 2.5e-93 346.3 324 59.0
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 4.3e-93 345.5 456 48.7
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 4.3e-93 345.5 407 51.8
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 7.3e-93 344.7 361 54.6
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 7.3e-93 344.7 425 49.4
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.2e-92 344.0 416 49.8
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 2.8e-92 342.8 425 49.2
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 3.6e-92 342.4 474 46.4
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 8.1e-92 341.3 407 49.9
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 2.3e-91 339.7 331 58.6
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 4.0e-91 339.0 462 45.9
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 5.2e-91 338.6 279 64.2
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 5.2e-91 338.6 455 46.4
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 5.2e-91 338.6 474 45.8
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 5.2e-91 338.6 488 45.7
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 8.9e-91 337.8 432 49.3
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 8.9e-91 337.8 462 45.9
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 1.5e-90 337.0 474 44.7
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.0e-90 336.7 463 45.6
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 4.4e-90 335.5 473 45.0
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 2.9e-89 332.8 280 64.6
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 3.7e-89 332.4 385 50.6
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 3.2e-88 329.3 443 46.5
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 5.4e-88 328.6 484 43.6
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 1.2e-87 327.4 491 43.0
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 3.0e-86 322.8 303 56.4
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 3.9e-86 322.4 281 61.6
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 1.1e-85 320.9 320 57.2
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 9.5e-85 317.8 385 49.6
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 3.1e-83 312.8 432 43.5
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 4.0e-83 312.4 319 57.1
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 1.5e-82 310.5 327 54.4
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 1.5e-82 310.5 327 54.4
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 1.5e-82 310.5 303 57.1
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 2.6e-82 309.7 383 49.3
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 3.4e-82 309.3 403 46.4
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 2.9e-81 306.2 451 43.5
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.4e-80 303.9 443 44.2
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 1.2e-79 300.8 382 48.7
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 1.2e-79 300.8 395 48.4
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 1.0e-78 297.7 379 48.3
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 1.3e-78 297.4 382 48.2
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 3.0e-78 296.2 355 51.8
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 1.5e-77 293.9 403 46.4
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.9e-77 293.5 321 55.1
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 1.2e-76 290.8 400 45.5
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 2.1e-76 290.0 403 45.9
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 4.7e-76 288.9 469 43.9
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 4.7e-76 288.9 307 52.1
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 8.1e-76 288.1 251 63.3
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 5.2e-75 285.4 375 46.4
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 2.2e-73 280.0 415 42.9
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 2.2e-73 280.0 387 44.7
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 3.8e-73 279.3 409 43.3
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 4.9e-73 278.9 397 45.3
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 1.1e-72 277.7 414 43.0
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 1.9e-72 276.9 383 47.0
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 2.3e-70 270.0 415 42.7
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 6.6e-70 268.5 373 44.8
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 1.1e-69 267.7 422 40.8
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 3.3e-69 266.2 456 38.8
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 3.3e-69 266.2 456 38.8
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 1.3e-68 264.2 310 51.0
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 2.6e-66 256.5 430 41.6
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 3.4e-66 256.1 553 35.3
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 9.9e-66 254.6 372 44.9
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 2.9e-65 253.1 448 38.2
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 1.4e-64 250.8 439 39.2
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 4.2e-64 249.2 557 34.6
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 1.8e-59 233.8 314 46.5
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 1.9e-56 223.8 333 44.1
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 9.3e-56 221.5 349 41.8
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 3.5e-55 219.5 141 76.6
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 2.1e-52 210.3 299 47.8
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 3.7e-52 209.5 150 72.7
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 2.6e-50 203.4 141 73.8
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 3.0e-46 189.9 318 43.1
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 2.3e-38 163.7 189 50.3
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 3.9e-38 162.9 406 31.5
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 7.7e-34 148.7 112 67.9
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 8.8e-30 135.2 117 60.7
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 1.5e-29 134.4 349 30.4
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 4.2e-24 116.3 74 73.0
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 2.7e-23 113.6 76 68.4
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 3.5e-18 96.7 122 47.5
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 4.0e-14 83.2 69 52.2
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 1.5e-13 81.3 85 48.2
Cre01.g049550 Chlamydomonas reinhardtii HOM05D005805 ORTHO05D139669 6.8e-06 55.8 141 31.9


User provided reference genes

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