Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G148800 Phaseolus vulgaris HOM05D007945 ORTHO05D010049 3.8e-137 491.5 248 100.0
VMungo1215G0385 Vigna mungo HOM05D007945 ORTHO05D010049 6.8e-102 374.4 236 80.9
Glyma.01G024900 Glycine max HOM05D007945 ORTHO05D010049 8.6e-89 330.9 243 74.9
Glyma.02G040200 Glycine max HOM05D007945 ORTHO05D010049 5.2e-86 321.6 261 72.0
Lalb_Chr16g0381801 Lupinus albus HOM05D007945 ORTHO05D010049 1.1e-35 154.5 250 47.2
Lj2g0025684 Lotus japonicus HOM05D007945 ORTHO05D010049 1.4e-35 154.1 182 57.7
Medtr5g032580 Medicago truncatula HOM05D007945 ORTHO05D010049 1.6e-31 140.6 185 52.4
arahy.Tifrunner.gnm1.ann1.A6KDPG Arachis hypogaea HOM05D007945 ORTHO05D010049 1.8e-30 137.1 256 45.3
arahy.Tifrunner.gnm1.ann1.N1XH1Z Arachis hypogaea HOM05D007945 ORTHO05D010049 1.8e-30 137.1 256 45.3
Ca_04542_v3 Cicer arietinum L. HOM05D007945 ORTHO05D010049 1.7e-28 130.6 183 48.6
Psat2g081080 Pisum sativum HOM05D007945 ORTHO05D010049 3.8e-28 129.4 181 47.0
Dinv20782 Davidia involucrata HOM05D007945 ORTHO05D010049 2.5e-27 126.7 180 43.3
Haze_15050 Corylus avellana HOM05D007945 ORTHO05D010049 2.7e-26 123.2 256 38.7
TPR.G29980 Trifolium pratense HOM05D007945 ORTHO05D010049 2.7e-26 123.2 144 53.5
QL06p047569 Quercus lobata HOM05D007945 ORTHO05D010049 5.1e-25 119.0 191 41.9
Thecc.01G092700 Theobroma cacao HOM05D007945 ORTHO05D010049 2.5e-24 116.7 248 37.9
Cfa004358 Carpinus fangiana HOM05D007945 ORTHO05D010049 2.2e-23 113.6 233 39.1
Gorai.007G233700 Gossypium raimondii HOM05D007945 ORTHO05D010049 6.9e-22 108.6 248 36.7
Oeu053574.1 Olea europaea HOM05D007945 ORTHO05D010049 6.9e-22 108.6 177 40.7
Gohir.D11G217700 Gossypium hirsutum HOM05D007945 ORTHO05D010049 1.2e-21 107.8 190 41.1
Aqoxy5G01332 Aquilegia oxysepala HOM05D007945 ORTHO05D010049 2.0e-21 107.1 242 33.9
Atru.chr3.1299 Acer truncatum HOM05D007945 ORTHO05D010049 3.4e-21 106.3 197 39.1
Hma1.2p1_0045F.1_g026430 Hydrangea macrophylla HOM05D007945 ORTHO05D010049 3.4e-21 106.3 128 50.8
Ciclev10027143m.g Citrus clementina HOM05D007945 ORTHO05D010049 4.5e-21 105.9 140 47.9
Lj4C272T2 Lonicera japonica HOM05D007945 ORTHO05D010049 4.5e-21 105.9 190 38.4
MBI02_g18288_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D002064 4.5e-21 105.9 188 39.9
TAR376G1002 Trochodendron aralioides HOM05D007945 ORTHO05D010049 5.0e-20 102.4 154 42.2
RcHm_v2.0_Chr2g0111971 Rosa chinensis HOM05D007945 ORTHO05D010049 3.2e-19 99.8 155 44.5
Rhsim08G0014600 Rhododendron simsii HOM05D007945 ORTHO05D010049 7.2e-19 98.6 132 46.2
Manes.13G098400 Manihot esculenta HOM05D007945 ORTHO05D010049 9.4e-19 98.2 205 36.1
Solyc04g013200.1 Solanum lycopersicum HOM05D007945 ORTHO05D010049 2.1e-18 97.1 161 38.5
MD15G1315600 Malus domestica HOM05D007945 ORTHO05D010049 3.6e-18 96.3 207 37.2
Nn1g05498 Nelumbo nucifera HOM05D007945 ORTHO05D010049 3.6e-18 96.3 148 45.3
Cc07_g14340 Coffea canephora HOM05D007945 ORTHO05D010049 7.9e-18 95.1 150 42.0
CiPaw.01G047400 Carya illinoinensis HOM05D007945 ORTHO05D010049 3.9e-17 92.8 239 36.0
COL.COLO4_27337 Corchorus olitorius HOM05D007945 ORTHO05D010049 3.9e-17 92.8 135 43.7
CANSAT01G1602 Cannabis sativa HOM05D007945 ORTHO05D010049 8.8e-17 91.7 241 34.9
TAR628G0666 Trochodendron aralioides HOM05D007577 ORTHO05D002366 8.8e-17 91.7 185 36.8
Nitab4.5_0000902g0130 Nicotiana tabacum HOM05D007945 ORTHO05D010049 1.1e-16 91.3 169 35.5
Actinidia30841 Actinidia chinensis HOM05D007945 ORTHO05D010049 1.5e-16 90.9 95 51.6
PGSC0003DMG400023581 Solanum tuberosum HOM05D007945 ORTHO05D010049 5.7e-16 89.0 160 39.4
MELO3C007726.2 Cucumis melo HOM05D007945 ORTHO05D010049 7.4e-16 88.6 119 45.4
Migut.K00772 Erythranthe guttata HOM05D007945 ORTHO05D010049 9.7e-16 88.2 160 38.1
Sed0020490 Sechium edule HOM05D007945 ORTHO05D010049 9.7e-16 88.2 118 45.8
FAN19G2492 Fragaria x ananassa HOM05D007945 ORTHO05D010049 1.3e-15 87.8 182 37.4
FvH4_1g20030 Fragaria vesca HOM05D007945 ORTHO05D010049 2.8e-15 86.7 182 37.4
THA.LOC104807860 Tarenaya hassleriana HOM05D007945 ORTHO05D010049 6.3e-15 85.5 84 54.8
Sopen04g006380 Solanum pennellii HOM05D007945 ORTHO05D010049 1.8e-14 84.0 160 36.2
CiPaw.02G021700 Carya illinoinensis HOM05D007945 ORTHO05D010049 2.4e-14 83.6 148 39.9
FAN28G1827 Fragaria x ananassa HOM05D007945 ORTHO05D010049 3.1e-14 83.2 156 39.7
AL7G12470 Arabidopsis lyrata HOM05D007945 ORTHO05D010049 5.3e-14 82.4 84 54.8
Nitab4.5_0001122g0120 Nicotiana tabacum HOM05D007945 ORTHO05D010049 1.5e-13 80.9 158 36.7
AT1G26290 Arabidopsis thaliana HOM05D007945 ORTHO05D010049 2.0e-13 80.5 84 52.4
FAN26G0842 Fragaria x ananassa HOM05D007945 ORTHO05D010049 2.6e-13 80.1 182 36.8
Sp7g35750 Schrenkiella parvula HOM05D007945 ORTHO05D010049 2.6e-13 80.1 131 39.7
BcaB03g12302 Brassica carinata HOM05D007945 ORTHO05D010049 3.4e-13 79.7 84 52.4
BcaC01g00344 Brassica carinata HOM05D007945 ORTHO05D010049 4.5e-13 79.3 84 52.4
A08p23120 Brassica napus HOM05D007945 ORTHO05D010049 4.5e-13 79.3 84 52.4
BolC3t20117H Brassica oleracea HOM05D007945 ORTHO05D010049 4.5e-13 79.3 84 52.4
BraA08t34270Z Brassica rapa HOM05D007945 ORTHO05D010049 4.5e-13 79.3 84 52.4
Thhalv10026515m.g Eutrema salsugineum HOM05D007945 ORTHO05D010049 4.5e-13 79.3 84 52.4
Carub.0007s0210 Capsella rubella HOM05D007945 ORTHO05D010049 5.9e-13 79.0 107 45.8
CARHR246510 Cardamine hirsuta HOM05D007945 ORTHO05D010049 7.7e-13 78.6 84 52.4
C03p78720 Brassica napus HOM05D007945 ORTHO05D010049 1.3e-12 77.8 84 51.2
Prupe.6G196100 Prunus persica HOM05D007945 ORTHO05D010049 1.7e-12 77.4 135 40.0
SGA_v2.0_scaffold45G17252 Striga asiatica HOM05D007945 ORTHO05D010049 1.7e-12 77.4 126 38.1
PGR102G2218 Punica granatum HOM05D007945 ORTHO05D010049 2.2e-12 77.0 127 40.2
Sc03g0000270 Simmondsia chinensis HOM05D007945 ORTHO05D010049 2.2e-12 77.0 178 33.1
ClCG01G018480 Citrullus lanatus HOM05D007945 ORTHO05D010049 3.8e-12 76.3 126 43.7
CsaV3_6G045130 Cucumis sativus L. HOM05D007945 ORTHO05D010049 1.9e-11 73.9 129 40.3
Peaxi162Scf00569g00003 Petunia axillaris HOM05D007945 ORTHO05D010049 1.9e-11 73.9 143 35.0
Cpa.g.sc55.53 Carica papaya HOM05D007945 ORTHO05D010049 4.2e-11 72.8 138 34.8
EL10Ac6g14794 Beta vulgaris HOM05D007945 ORTHO05D010049 2.1e-10 70.5 130 36.2
DCAR_003454 Daucus carota HOM05D007945 ORTHO05D010049 2.7e-10 70.1 136 39.0
ATR0022G034 Amborella trichopoda HOM05D007945 ORTHO05D010049 1.0e-09 68.2 133 36.1
ECA232G3960 Erigeron canadensis HOM05D007945 ORTHO05D010049 1.8e-09 67.4 147 32.0
HanXRQChr09g0259601 Helianthus annuus HOM05D007945 ORTHO05D010049 2.2e-07 60.5 122 36.9
TWI74G0422 Tripterygium wilfordii HOM05D007945 ORTHO05D010049 1.1e-06 58.2 135 34.1
SalBow5G3321 Salvia bowleyana HOM05D007945 ORTHO05D010049 1.8e-06 57.4 132 35.6


User provided reference genes

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