Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G148400 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 4.4e-83 311.2 156 100.0
Phvul.002G148200 Phaseolus vulgaris HOM05D000139 ORTHO05D020776 2.4e-57 225.7 149 79.2
Glyma.01G024500 Glycine max HOM05D000139 ORTHO05D020776 2.4e-49 199.1 151 68.2
Glyma.02G040802 Glycine max HOM05D000139 ORTHO05D020776 8.7e-47 190.7 152 67.1
Lalb_Chr16g0381761 Lupinus albus HOM05D000139 ORTHO05D020776 1.9e-38 162.9 135 63.0
Glyma.01G024300 Glycine max HOM05D000139 ORTHO05D214621 7.4e-38 161.0 150 60.7
Psat2g054760 Pisum sativum HOM05D000139 ORTHO05D014784 2.6e-27 125.9 135 50.4
Medtr5g073460 Medicago truncatula HOM05D000139 ORTHO05D000103 5.0e-26 121.7 136 47.8
LjContig00141g0019613 Lotus japonicus HOM05D000139 ORTHO05D010351 6.5e-26 121.3 134 46.3
Ca_05658_v3 Cicer arietinum L. HOM05D000139 ORTHO05D010351 1.9e-25 119.8 138 44.2
LjContig00141g0005562 Lotus japonicus HOM05D000139 ORTHO05D010351 5.5e-25 118.2 136 46.3
Medtr5g073880 Medicago truncatula HOM05D000139 ORTHO05D010351 9.4e-25 117.5 134 44.8
Psat2g054880 Pisum sativum HOM05D000139 ORTHO05D010351 1.6e-24 116.7 134 45.5
TPR.G27407 Trifolium pratense HOM05D000139 ORTHO05D010351 3.6e-24 115.5 136 44.9
Medtr5g073480 Medicago truncatula HOM05D000139 ORTHO05D010351 4.7e-24 115.2 136 44.1
Medtr5g073620 Medicago truncatula HOM05D000139 ORTHO05D010351 4.7e-24 115.2 134 46.3
Medtr5g073960 Medicago truncatula HOM05D000139 ORTHO05D010351 1.0e-23 114.0 130 43.8
Glyma.14G199800 Glycine max HOM05D000081 ORTHO05D014784 1.8e-23 113.2 143 42.0
arahy.Tifrunner.gnm1.ann1.T11BLV Arachis hypogaea HOM05D000139 ORTHO05D000103 2.3e-23 112.8 138 44.2
Medtr5g074450 Medicago truncatula HOM05D002545 ORTHO05D002335 3.0e-23 112.5 136 44.1
Medtr5g074130 Medicago truncatula HOM05D000139 ORTHO05D010351 1.1e-22 110.5 132 44.7
Medtr5g093530 Medicago truncatula HOM05D000139 ORTHO05D010351 1.1e-22 110.5 132 44.7
LjContig00141g0001664 Lotus japonicus HOM05D000139 ORTHO05D000103 3.3e-22 109.0 136 43.4
TPR.G27408 Trifolium pratense HOM05D000139 ORTHO05D010351 3.3e-22 109.0 136 42.6
arahy.Tifrunner.gnm1.ann1.GR7VGW Arachis hypogaea HOM05D000139 ORTHO05D010351 4.4e-22 108.6 138 42.8
Psat2g054200 Pisum sativum HOM05D000139 ORTHO05D010351 4.4e-22 108.6 136 41.2
arahy.Tifrunner.gnm1.ann1.5S97B2 Arachis hypogaea HOM05D000139 ORTHO05D010351 7.4e-22 107.8 138 42.8
Glyma.14G199700 Glycine max HOM05D000139 ORTHO05D010351 7.4e-22 107.8 132 44.7
arahy.Tifrunner.gnm1.ann1.SDH2U8 Arachis hypogaea HOM05D000139 ORTHO05D010351 1.3e-21 107.1 138 42.8
Glyma.14G199600 Glycine max HOM05D000139 ORTHO05D010351 2.2e-21 106.3 132 46.2
Medtr3g464010 Medicago truncatula HOM05D000139 ORTHO05D010351 2.8e-21 105.9 136 44.1
Medtr5g074200 Medicago truncatula HOM05D000081 ORTHO05D014784 2.8e-21 105.9 133 43.6
Psat2g054920 Pisum sativum HOM05D000081 ORTHO05D014784 3.7e-21 105.5 134 44.8
arahy.Tifrunner.gnm1.ann1.5Y376T Arachis hypogaea HOM05D000139 ORTHO05D010351 1.4e-20 103.6 132 43.9
arahy.Tifrunner.gnm1.ann1.6DK79V Arachis hypogaea HOM05D000139 ORTHO05D010351 1.8e-20 103.2 134 39.6
Medtr5g073810 Medicago truncatula HOM05D000139 ORTHO05D010351 3.1e-20 102.4 137 41.6
Glyma.02G231900 Glycine max HOM05D000139 ORTHO05D010351 4.1e-20 102.1 132 42.4
Medtr5g073840 Medicago truncatula HOM05D000139 ORTHO05D010351 7.0e-20 101.3 133 42.1
Medtr5g073920 Medicago truncatula HOM05D000139 ORTHO05D010351 7.0e-20 101.3 132 43.2
TPR.G24967 Trifolium pratense HOM05D000081 ORTHO05D014784 9.1e-20 100.9 142 40.1
Psat2g054640 Pisum sativum HOM05D000139 ORTHO05D000103 1.2e-19 100.5 136 41.2
Phvul.008G251700 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 2.6e-19 99.4 144 39.6
arahy.Tifrunner.gnm1.ann1.MWQM2H Arachis hypogaea HOM05D000139 ORTHO05D010351 3.5e-19 99.0 134 38.8
Medtr5g074190 Medicago truncatula HOM05D001165 ORTHO05D010351 3.5e-19 99.0 130 40.0
arahy.Tifrunner.gnm1.ann1.47MQLD Arachis hypogaea HOM05D000139 ORTHO05D000103 5.9e-19 98.2 136 41.9
Medtr5g073610 Medicago truncatula HOM05D000139 ORTHO05D010351 5.9e-19 98.2 135 43.0
arahy.Tifrunner.gnm1.ann1.JG7RLL Arachis hypogaea HOM05D000139 ORTHO05D000103 7.7e-19 97.8 136 42.6
Lalb_Chr10g0103531 Lupinus albus HOM05D000139 ORTHO05D010351 1.0e-18 97.4 132 40.9
Phvul.008G251800 Phaseolus vulgaris HOM05D000081 ORTHO05D014784 1.0e-18 97.4 144 40.3
Medtr6g078770 Medicago truncatula HOM05D000139 ORTHO05D019269 1.7e-18 96.7 154 39.6
Medtr5g073750 Medicago truncatula HOM05D000139 ORTHO05D010351 5.0e-18 95.1 137 43.1
Medtr5g074090 Medicago truncatula HOM05D000139 ORTHO05D010351 5.0e-18 95.1 129 39.5
Phvul.008G252300 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 6.5e-18 94.7 132 43.9
arahy.Tifrunner.gnm1.ann1.T74DGZ Arachis hypogaea HOM05D000139 ORTHO05D000103 1.1e-17 94.0 122 41.0
arahy.Tifrunner.gnm1.ann1.624Y80 Arachis hypogaea HOM05D000139 ORTHO05D010351 1.9e-17 93.2 134 37.3
Medtr5g074150 Medicago truncatula HOM05D000139 ORTHO05D010351 1.9e-17 93.2 146 37.0
Lalb_Chr10g0103581 Lupinus albus HOM05D000139 ORTHO05D010351 2.5e-17 92.8 136 40.4
arahy.Tifrunner.gnm1.ann1.B7RGGF Arachis hypogaea HOM05D000139 ORTHO05D000103 4.2e-17 92.0 122 41.0
Glyma.17G240200 Glycine max HOM05D000139 ORTHO05D010351 4.2e-17 92.0 138 38.4
Medtr5g073860 Medicago truncatula HOM05D000139 ORTHO05D010351 7.2e-17 91.3 120 40.0
Medtr6g078610 Medicago truncatula HOM05D000005 ORTHO05D019269 2.1e-16 89.7 135 39.3
Phvul.008G252432 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.7e-16 89.4 134 40.3
Lalb_Chr02g0160091 Lupinus albus HOM05D000139 ORTHO05D020776 3.6e-16 89.0 74 63.5
Lalb_Chr05g0220931 Lupinus albus HOM05D000005 ORTHO05D000012 1.0e-15 87.4 132 39.4
Psat1g119960 Pisum sativum HOM05D000139 ORTHO05D019269 1.0e-15 87.4 133 38.3
arahy.Tifrunner.gnm1.ann1.DF7IVU Arachis hypogaea HOM05D000139 ORTHO05D010351 3.0e-15 85.9 139 37.4
Lj2g0002486 Lotus japonicus HOM05D000005 ORTHO05D000012 3.9e-15 85.5 133 38.3
Lj2g0021893 Lotus japonicus HOM05D000139 ORTHO05D019269 3.9e-15 85.5 133 38.3
Medtr5g073470 Medicago truncatula HOM05D000139 ORTHO05D010351 6.7e-15 84.7 136 37.5
Lalb_Chr16g0381701 Lupinus albus HOM05D000139 ORTHO05D020776 8.8e-15 84.3 76 59.2
Medtr5g093540 Medicago truncatula HOM05D000139 ORTHO05D014784 1.1e-14 84.0 130 36.9
Glyma.06G200300 Glycine max HOM05D000139 ORTHO05D010351 2.6e-14 82.8 130 36.9
Glyma.02G232000 Glycine max HOM05D000139 ORTHO05D010351 9.7e-14 80.9 137 38.0
Medtr6g075870 Medicago truncatula HOM05D000005 ORTHO05D000012 1.3e-13 80.5 131 38.2
Phvul.008G167600 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.2e-13 79.7 127 40.9
Phvul.008G252500 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 8.2e-13 77.8 129 41.1
Phvul.008G257000 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.4e-12 77.0 132 37.1
LjContig00141g0009438 Lotus japonicus HOM05D000081 ORTHO05D014784 2.4e-12 76.3 88 47.7
Phvul.008G257033 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.4e-12 76.3 132 35.6
arahy.Tifrunner.gnm1.ann1.615JIB Arachis hypogaea HOM05D064904 ORTHO05D087328 7.0e-12 74.7 127 40.9
arahy.Tifrunner.gnm1.ann1.CL8DJC Arachis hypogaea HOM05D000139 ORTHO05D000103 1.2e-11 73.9 111 39.6
Phvul.001G122400 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 1.2e-11 73.9 136 32.4
Lj2g0013383 Lotus japonicus HOM05D000139 ORTHO05D019269 2.0e-11 73.2 117 37.6
Phvul.008G257100 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 2.0e-11 73.2 132 35.6
arahy.Tifrunner.gnm1.ann1.YM3EBM Arachis hypogaea HOM05D064904 ORTHO05D085231 4.5e-11 72.0 124 36.3
arahy.Tifrunner.gnm1.ann1.5L9Z02 Arachis hypogaea HOM05D000139 ORTHO05D026354 1.5e-09 67.0 144 29.9
Medtr5g073500 Medicago truncatula HOM05D000139 ORTHO05D029709 1.9e-09 66.6 76 42.1
Ca_05667_v3 Cicer arietinum L. HOM05D000139 ORTHO05D022363 1.2e-08 63.9 130 30.0
Medtr5g073660 Medicago truncatula HOM05D000139 ORTHO05D266772 1.2e-08 63.9 52 53.8
Medtr5g073820 Medicago truncatula HOM05D000139 ORTHO05D010351 1.2e-08 63.9 52 53.8
arahy.Tifrunner.gnm1.ann1.TWH6QD Arachis hypogaea HOM05D000139 ORTHO05D000103 2.1e-08 63.2 147 33.3
Medtr5g073830 Medicago truncatula HOM05D000139 ORTHO05D010351 2.1e-08 63.2 86 40.7
arahy.Tifrunner.gnm1.ann1.1D3WUK Arachis hypogaea HOM05D000139 ORTHO05D083086 2.7e-08 62.8 128 31.2
Lalb_Chr04g0251941 Lupinus albus HOM05D000081 ORTHO05D014784 2.7e-08 62.8 47 55.3
arahy.Tifrunner.gnm1.ann1.DNP257 Arachis hypogaea HOM05D000139 ORTHO05D000103 8.0e-08 61.2 149 31.5
arahy.Tifrunner.gnm1.ann1.47NBR1 Arachis hypogaea HOM05D002434 ORTHO05D082345 1.4e-07 60.5 127 29.1
Glyma.01G024200 Glycine max HOM05D001056 ORTHO05D000902 1.8e-07 60.1 59 55.9
Lalb_Chr17g0345331 Lupinus albus HOM05D000139 ORTHO05D000103 1.5e-06 57.0 51 51.0
Medtr5g074070 Medicago truncatula HOM05D000139 ORTHO05D010351 1.5e-06 57.0 133 31.6
Medtr6g078630 Medicago truncatula HOM05D000005 ORTHO05D019269 1.5e-06 57.0 75 37.3
Phvul.008G256900 Phaseolus vulgaris HOM05D000139 ORTHO05D010351 7.5e-06 54.7 111 32.4
arahy.Tifrunner.gnm1.ann1.PW0779 Arachis hypogaea HOM05D000139 ORTHO05D000103 9.7e-06 54.3 109 31.2


User provided reference genes

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