Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G147100 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 0.0e+00 1300.4 735 100.0
VMungo1215G1834 Vigna mungo HOM05D003192 ORTHO05D003596 1.2e-295 1019.6 736 81.1
Glyma.01G023100 Glycine max HOM05D003192 ORTHO05D003596 4.6e-255 884.8 754 68.2
Glyma.18G147000 Glycine max HOM05D003192 ORTHO05D003596 1.8e-150 537.3 1031 42.1
Glyma.08G279600 Glycine max HOM05D003192 ORTHO05D003596 1.7e-148 530.8 1033 42.4
VMungo0251G1378 Vigna mungo HOM05D003192 ORTHO05D003596 2.3e-121 440.7 953 39.9
Lj4g0006883 Lotus japonicus HOM05D003192 ORTHO05D003596 2.9e-116 423.7 952 39.1
CiPaw.08G140100 Carya illinoinensis HOM05D003192 ORTHO05D003596 2.4e-110 404.1 1002 35.8
Phvul.003G289000 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 5.8e-109 399.4 952 37.9
Medtr5g032080 Medicago truncatula HOM05D003192 ORTHO05D003596 2.3e-105 387.5 761 39.8
Ca_22705_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 8.1e-103 379.0 879 36.6
QL06p035789 Quercus lobata HOM05D003192 ORTHO05D003596 3.4e-101 373.6 1089 33.1
Lalb_Chr05g0216371 Lupinus albus HOM05D003192 ORTHO05D003596 1.9e-91 341.3 854 36.8
Eucgr.I00559 Eucalyptus grandis HOM05D003192 ORTHO05D003596 1.8e-89 334.7 907 32.7
Lalb_Chr05g0228511 Lupinus albus HOM05D003192 ORTHO05D003596 5.1e-89 333.2 1000 33.7
Ciclev10024755m.g Citrus clementina HOM05D003192 ORTHO05D003596 1.1e-83 315.5 1109 32.1
Lj2g0008675 Lotus japonicus HOM05D003192 ORTHO05D003596 1.9e-83 314.7 480 45.6
ClCG01G018360 Citrullus lanatus HOM05D003192 ORTHO05D003596 7.2e-83 312.8 1025 29.5
TPR.G39012 Trifolium pratense HOM05D003192 ORTHO05D003596 2.1e-82 311.2 743 36.7
Prupe.6G201700 Prunus persica HOM05D003192 ORTHO05D003596 1.4e-81 308.5 1022 30.8
CsaV3_6G044990 Cucumis sativus L. HOM05D003192 ORTHO05D003596 1.8e-81 308.1 1025 29.2
MELO3C007714.2 Cucumis melo HOM05D003192 ORTHO05D003596 1.1e-80 305.4 1025 29.2
Atru.chr3.1246 Acer truncatum HOM05D003192 ORTHO05D003596 3.7e-79 300.4 790 35.6
TWI53G1641 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 5.9e-77 293.1 457 45.5
Sed0023170 Sechium edule HOM05D003192 ORTHO05D003596 1.6e-74 285.0 1017 29.0
Haze_03871 Corylus avellana HOM05D003192 ORTHO05D003596 1.0e-73 282.3 469 43.1
Cfa006881 Carpinus fangiana HOM05D003192 ORTHO05D003596 2.6e-72 277.7 470 42.6
GSVIVG01005928001 Vitis vinifera HOM05D003192 ORTHO05D003596 9.1e-70 269.2 891 31.4
TWI77G0115 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 8.5e-68 262.7 1111 29.6
Duzib147G1583 Durio zibethinus HOM05D003192 ORTHO05D003596 2.1e-66 258.1 1187 26.4
CANSAT01G3047 Cannabis sativa HOM05D003192 ORTHO05D003596 2.3e-65 254.6 536 35.6
TAR381G0021 Trochodendron aralioides HOM05D003192 ORTHO05D003596 2.3e-65 254.6 936 32.4
PGR031G3296 Punica granatum HOM05D003192 ORTHO05D003596 1.5e-64 251.9 913 27.7
Ca_22609_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 2.0e-64 251.5 791 34.6
Sabra16G0282500 Salix brachista HOM05D003192 ORTHO05D003596 7.4e-64 249.6 1126 27.2
Thecc.01G090500 Theobroma cacao HOM05D003192 ORTHO05D003596 2.4e-62 244.6 473 39.1
Gohir.D11G216300 Gossypium hirsutum HOM05D003192 ORTHO05D003596 3.1e-62 244.2 672 33.6
Potri.011G131500 Populus trichocarpa HOM05D003192 ORTHO05D003596 3.1e-62 244.2 1185 25.7
Potri.001G415800 Populus trichocarpa HOM05D003192 ORTHO05D003596 4.1e-62 243.8 1188 26.2
Medtr8g471150 Medicago truncatula HOM05D003192 ORTHO05D003596 1.2e-61 242.3 968 31.1
Sed0023722 Sechium edule HOM05D003192 ORTHO05D003596 1.6e-61 241.9 1025 26.1
MD01G1039400 Malus domestica HOM05D003192 ORTHO05D003596 2.6e-61 241.1 918 27.7
Gohir.A11G207000 Gossypium hirsutum HOM05D003192 ORTHO05D003596 3.8e-60 237.3 539 36.4
Gorai.007G232500 Gossypium raimondii HOM05D003192 ORTHO05D003596 3.2e-59 234.2 755 31.5
arahy.Tifrunner.gnm1.ann1.88QBIW Arachis hypogaea HOM05D003192 ORTHO05D003596 4.2e-59 233.8 793 32.5
FAN19G3065 Fragaria x ananassa HOM05D003192 ORTHO05D003596 4.7e-58 230.3 529 35.7
TPR.G14606 Trifolium pratense HOM05D003192 ORTHO05D003596 1.4e-57 228.8 777 34.7
Duzib187G1957 Durio zibethinus HOM05D003192 ORTHO05D003596 1.8e-57 228.4 742 32.5
RcHm_v2.0_Chr2g0111201 Rosa chinensis HOM05D003192 ORTHO05D003596 2.3e-57 228.0 533 34.9
arahy.Tifrunner.gnm1.ann1.Y4FDPH Arachis hypogaea HOM05D003192 ORTHO05D003596 3.0e-57 227.6 795 33.1
Sabra11G0118600 Salix brachista HOM05D003192 ORTHO05D003596 2.6e-56 224.6 1186 25.8
FvH4_1g19631 Fragaria vesca HOM05D003192 ORTHO05D003596 9.7e-56 222.6 499 36.3
Manes.13G100000 Manihot esculenta HOM05D003192 ORTHO05D003596 2.8e-55 221.1 1107 26.1
FAN28G2653 Fragaria x ananassa HOM05D003192 ORTHO05D003596 8.3e-55 219.5 485 36.5
Glyma.09G199166 Glycine max HOM05D003192 ORTHO05D003596 1.4e-54 218.8 191 69.1
MSTRG.15688 Avicennia marina HOM05D003192 ORTHO05D003596 2.2e-52 211.5 944 27.5
FAN26G1555 Fragaria x ananassa HOM05D003192 ORTHO05D003596 3.8e-52 210.7 501 35.9
FAN23G2850 Fragaria x ananassa HOM05D003192 ORTHO05D003596 1.5e-51 208.8 534 35.0
Nn5g29883 Nelumbo nucifera HOM05D003192 ORTHO05D003596 2.1e-50 204.9 952 28.9
Psat4g119640 Pisum sativum HOM05D003192 ORTHO05D003596 3.6e-50 204.1 819 31.7
Dinv36931 Davidia involucrata HOM05D003192 ORTHO05D003596 3.4e-48 197.6 673 30.6
QL11p025213 Quercus lobata HOM05D003192 ORTHO05D003596 5.7e-48 196.8 1044 26.5
TAR625G0274 Trochodendron aralioides HOM05D003192 ORTHO05D003596 1.3e-47 195.7 771 30.0
CSS0015283 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 6.3e-47 193.4 463 34.8
HanXRQChr11g0346961 Helianthus annuus HOM05D003192 ORTHO05D003596 1.1e-46 192.6 832 27.9
CiPaw.05G029500 Carya illinoinensis HOM05D003192 ORTHO05D003596 2.3e-44 184.9 916 25.4
MD10G1054400 Malus domestica HOM05D003192 ORTHO05D003596 6.6e-44 183.3 952 27.8
Cfa005735 Carpinus fangiana HOM05D003192 ORTHO05D003596 3.3e-43 181.0 943 25.1
Peaxi162Scf00191g00034 Petunia axillaris HOM05D003192 ORTHO05D003596 1.4e-41 175.6 951 26.5
Gohir.A11G050500 Gossypium hirsutum HOM05D003192 ORTHO05D003596 5.7e-40 170.2 1022 26.7
CAN.G1344.16 Capsicum annuum HOM05D003192 ORTHO05D003596 2.2e-39 168.3 1088 24.0
arahy.Tifrunner.gnm1.ann1.ND4N8X Arachis hypogaea HOM05D003192 ORTHO05D003596 8.3e-39 166.4 894 27.1
arahy.Tifrunner.gnm1.ann1.QT15T4 Arachis hypogaea HOM05D003192 ORTHO05D003596 8.3e-39 166.4 894 27.1
AT4G38062 Arabidopsis thaliana HOM05D003192 ORTHO05D003596 4.5e-37 160.6 785 27.0
Cc07_g14090 Coffea canephora HOM05D003192 ORTHO05D003596 5.9e-37 160.2 1127 22.2
Nitab4.5_0004153g0070 Nicotiana tabacum HOM05D003192 ORTHO05D003596 1.7e-36 158.7 1034 25.6
Gohir.D11G053800 Gossypium hirsutum HOM05D003192 ORTHO05D003596 5.0e-36 157.1 1021 26.6
MD05G1047500 Malus domestica HOM05D003192 ORTHO05D003596 1.1e-35 156.0 948 23.8
Gorai.007G058900 Gossypium raimondii HOM05D003192 ORTHO05D003596 2.5e-35 154.8 654 32.7
Actinidia25308 Actinidia chinensis HOM05D003192 ORTHO05D003596 4.3e-35 154.1 903 24.5
Sc08g0003910 Simmondsia chinensis HOM05D003192 ORTHO05D003596 4.3e-35 154.1 953 23.7
Sopen11g005420 Solanum pennellii HOM05D003192 ORTHO05D003596 7.3e-35 153.3 881 25.1
BcaC01g00350 Brassica carinata HOM05D003192 ORTHO05D003596 9.5e-35 152.9 1095 22.7
SGA_v2.0_scaffold115G32126 Striga asiatica HOM05D003192 ORTHO05D003596 4.7e-34 150.6 821 25.9
Dinv16002 Davidia involucrata HOM05D003192 ORTHO05D003596 6.1e-34 150.2 536 29.7
C03p78760 Brassica napus HOM05D003192 ORTHO05D003596 1.8e-33 148.7 1084 22.6
Carub.0007s0215 Capsella rubella HOM05D003192 ORTHO05D003596 8.9e-33 146.4 682 26.1
Haze_10522 Corylus avellana HOM05D003192 ORTHO05D003596 1.5e-32 145.6 934 23.3
RcHm_v2.0_Chr6g0271001 Rosa chinensis HOM05D003192 ORTHO05D003596 1.5e-32 145.6 906 26.3
Sc03g0000330 Simmondsia chinensis HOM05D003192 ORTHO05D003596 2.0e-32 145.2 633 30.6
BraA08t34266Z Brassica rapa HOM05D003192 ORTHO05D003596 2.6e-32 144.8 632 26.7
Sp7g35710 Schrenkiella parvula HOM05D003192 ORTHO05D003596 2.6e-32 144.8 787 25.9
BolC3t20120H Brassica oleracea HOM05D003192 ORTHO05D003596 7.5e-32 143.3 1047 22.6
vmacro13008 Vaccinium macrocarpon HOM05D003192 ORTHO05D003596 1.3e-31 142.5 771 24.0
THA.LOC104807671 Tarenaya hassleriana HOM05D003192 ORTHO05D003596 1.7e-31 142.1 1103 23.5
AL7G12570 Arabidopsis lyrata HOM05D003192 ORTHO05D003596 2.9e-31 141.4 785 25.4
BcaB03g12309 Brassica carinata HOM05D003192 ORTHO05D003596 3.7e-31 141.0 1091 22.5
DCAR_014184 Daucus carota HOM05D003192 ORTHO05D003596 3.7e-31 141.0 862 24.8
Gohir.A02G144501 Gossypium hirsutum HOM05D003192 ORTHO05D003596 8.3e-31 139.8 680 25.1
A08p23070 Brassica napus HOM05D003192 ORTHO05D003596 5.4e-30 137.1 659 26.3
Dinv13601 Davidia involucrata HOM05D003192 ORTHO05D003596 5.4e-30 137.1 520 28.8
MBI16_g12462_MAGBIO Magnolia biondii HOM05D003192 ORTHO05D003596 5.4e-30 137.1 789 24.0
Prupe.8G069900 Prunus persica HOM05D003192 ORTHO05D003596 7.0e-30 136.7 953 25.6
CSS0047518 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 1.6e-29 135.6 1006 23.2
Glyma.09G199232 Glycine max HOM05D003192 ORTHO05D003596 2.7e-29 134.8 237 43.0
Dinv24148 Davidia involucrata HOM05D003192 ORTHO05D003596 6.0e-29 133.7 952 25.7
CARHR246480 Cardamine hirsuta HOM05D003192 ORTHO05D003596 7.8e-29 133.3 792 25.1
FvH4_2g11711 Fragaria vesca HOM05D003192 ORTHO05D003596 1.0e-28 132.9 874 25.5
AUR62012886 Chenopodium quinoa HOM05D003192 ORTHO05D003596 1.3e-28 132.5 977 23.5
FAN24G0742 Fragaria x ananassa HOM05D003192 ORTHO05D003596 1.7e-28 132.1 874 25.9
QL11p025224 Quercus lobata HOM05D003192 ORTHO05D003596 6.6e-28 130.2 898 24.1
EL10Ac9g22072 Beta vulgaris HOM05D003192 ORTHO05D003596 1.1e-27 129.4 1014 24.0
Glyma.15G058300 Glycine max HOM05D003192 ORTHO05D003596 1.5e-27 129.0 938 23.2
Lsat_1_v5_gn_2_70360 Lactuca sativa HOM05D003192 ORTHO05D003596 1.9e-27 128.6 665 29.8
CSS0015843 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 7.3e-27 126.7 1006 22.9
Gohir.D03G036033 Gossypium hirsutum HOM05D003192 ORTHO05D003596 1.2e-26 125.9 737 24.7
Gorai.003G037800 Gossypium raimondii HOM05D003192 ORTHO05D003596 2.8e-26 124.8 402 32.1
Solyc11g010620.3 Solanum lycopersicum HOM05D003192 ORTHO05D003596 4.7e-26 124.0 886 24.6
Ca_00164_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 8.0e-26 123.2 884 23.4
Nitab4.5_0007624g0010 Nicotiana tabacum HOM05D003192 ORTHO05D003596 1.1e-25 122.9 948 24.4
ECA238G4297 Erigeron canadensis HOM05D003192 ORTHO05D003596 1.8e-25 122.1 514 28.6
Actinidia06514 Actinidia chinensis HOM05D003192 ORTHO05D003596 8.9e-25 119.8 399 31.3
arahy.Tifrunner.gnm1.ann1.T6BZ3D Arachis hypogaea HOM05D003192 ORTHO05D003596 1.2e-24 119.4 926 22.9
Glyma.13G256600 Glycine max HOM05D003192 ORTHO05D003596 3.4e-24 117.9 938 22.7
arahy.Tifrunner.gnm1.ann1.CWW4UK Arachis hypogaea HOM05D003192 ORTHO05D003596 5.8e-24 117.1 768 24.2
VMungo0299G0001 Vigna mungo HOM05D003192 ORTHO05D003596 5.8e-24 117.1 932 23.6
AUR62027110 Chenopodium quinoa HOM05D003192 ORTHO05D003596 7.5e-24 116.7 997 22.1
Nitab4.5_0002017g0020 Nicotiana tabacum HOM05D003192 ORTHO05D003596 1.3e-23 115.9 876 23.3
Aa31LG6G15020 Aethionema arabicum HOM05D003192 ORTHO05D003596 1.7e-23 115.5 731 25.2
Sopen10g017840 Solanum pennellii HOM05D003192 ORTHO05D003596 1.7e-23 115.5 880 23.0
Thhalv10027141m.g Eutrema salsugineum HOM05D003192 ORTHO05D003596 4.9e-23 114.0 707 26.2
Rhsim10G0172900 Rhododendron simsii HOM05D003192 ORTHO05D003596 1.1e-22 112.8 715 24.2
PSO210G4022 Papaver somniferum HOM05D003192 ORTHO05D003596 1.4e-22 112.5 661 26.9
Lj5C230T2 Lonicera japonica HOM05D003192 ORTHO05D003596 1.9e-22 112.1 959 22.9
PSO782G1877 Papaver somniferum HOM05D003192 ORTHO05D003596 7.1e-22 110.2 722 26.9
Nitab4.5_0008998g0020 Nicotiana tabacum HOM05D003192 ORTHO05D003596 1.6e-21 109.0 889 23.8
unitig_32.g10709 Utricularia gibba HOM05D003192 ORTHO05D003596 1.6e-21 109.0 883 25.4
TPR.G9507 Trifolium pratense HOM05D003192 ORTHO05D003596 2.7e-21 108.2 554 25.6
Solyc10g047540.3 Solanum lycopersicum HOM05D003192 ORTHO05D003596 4.6e-21 107.5 890 22.7
PSO063G1758 Papaver somniferum HOM05D003192 ORTHO05D003596 2.5e-19 101.7 667 26.4
Medtr2g009620 Medicago truncatula HOM05D003192 ORTHO05D003596 9.5e-19 99.8 867 23.8
Aqoxy5G01385 Aquilegia oxysepala HOM05D003192 ORTHO05D003596 3.6e-18 97.8 712 24.9
Manes.10G098500 Manihot esculenta HOM05D003192 ORTHO05D003596 6.2e-18 97.1 817 23.4
PGSC0003DMG400037454 Solanum tuberosum HOM05D003192 ORTHO05D003596 8.1e-18 96.7 831 23.1
Lalb_Chr20g0122921 Lupinus albus HOM05D003192 ORTHO05D003596 1.8e-17 95.5 652 25.6
Migut.K00798 Erythranthe guttata HOM05D003192 ORTHO05D003596 3.1e-17 94.7 945 24.3
Ah.01g007410 Amaranthus hybridus HOM05D003192 ORTHO05D003596 8.9e-17 93.2 923 20.9
Lj2P534T21 Lonicera japonica HOM05D003192 ORTHO05D003596 1.5e-16 92.4 197 39.1
PSO170G5608 Papaver somniferum HOM05D003192 ORTHO05D003596 1.5e-16 92.4 632 25.3
PGSC0003DMG400016132 Solanum tuberosum HOM05D003192 ORTHO05D003596 2.0e-16 92.0 954 23.3
TPR.G29979 Trifolium pratense HOM05D003192 ORTHO05D003596 2.0e-16 92.0 79 67.1
ECA234G2607 Erigeron canadensis HOM05D003192 ORTHO05D003596 3.4e-16 91.3 621 27.1
Phvul.006G201900 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 1.3e-15 89.4 976 20.2
Actinidia02392 Actinidia chinensis HOM05D003192 ORTHO05D003596 1.7e-15 89.0 459 27.5
MSTRG.20280 Avicennia marina HOM05D003192 ORTHO05D003596 4.9e-15 87.4 866 22.1
Lj2P534T19 Lonicera japonica HOM05D003192 ORTHO05D003596 7.1e-14 83.6 502 23.5
CANSAT54G2948 Cannabis sativa HOM05D003192 ORTHO05D003596 1.3e-12 79.3 863 21.8
CDE01G0670 Ceratophyllum demersum HOM05D003192 ORTHO05D003596 3.9e-12 77.8 943 19.7
HanXRQChr10g0289971 Helianthus annuus HOM05D003192 ORTHO05D003596 3.9e-12 77.8 785 22.5
Migut.B00551 Erythranthe guttata HOM05D003192 ORTHO05D003596 5.1e-12 77.4 560 26.1
Peaxi162Scf00003g00329 Petunia axillaris HOM05D003192 ORTHO05D003596 5.1e-12 77.4 807 21.1
FAN23G2642 Fragaria x ananassa HOM05D003192 ORTHO05D003596 1.9e-11 75.5 126 39.7
Atru.chr6.1263 Acer truncatum HOM05D003192 ORTHO05D003596 4.3e-11 74.3 546 25.1
SGA_v2.0_scaffold83G26376 Striga asiatica HOM05D003192 ORTHO05D003596 2.1e-10 72.0 747 22.1
DCAR_021912 Daucus carota HOM05D003192 ORTHO05D003596 3.6e-10 71.2 880 23.3
Dinv29065 Davidia involucrata HOM05D003192 ORTHO05D003596 3.6e-10 71.2 371 26.4
Oeu063542.1 Olea europaea HOM05D003192 ORTHO05D003596 8.1e-10 70.1 717 24.0
Os03g0691500 Oryza sativa ssp. japonica HOM05D003192 ORTHO05D003596 1.8e-09 68.9 765 21.3
Ah.01g023960 Amaranthus hybridus HOM05D003192 ORTHO05D003596 2.4e-09 68.6 743 21.4
HPP92_014211 Vanilla planifolia HOM05D003192 ORTHO05D003596 5.2e-09 67.4 308 26.3
Lsat_1_v5_gn_5_109820 Lactuca sativa HOM05D003192 ORTHO05D003596 3.8e-07 61.2 377 24.9
BcaB03g12311 Brassica carinata HOM05D003192 ORTHO05D003596 8.4e-07 60.1 292 25.7
Duzib264G0894 Durio zibethinus HOM05D003192 ORTHO05D003596 1.9e-06 58.9 71 49.3


User provided reference genes

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