Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G146800 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 0.0e+00 1177.5 591 100.0
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 4.9e-276 954.1 535 90.7
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 1.2e-261 906.4 536 85.6
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 2.5e-235 818.9 535 77.6
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 3.6e-226 788.5 535 74.4
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 8.5e-220 767.3 535 73.1
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 2.5e-219 765.8 535 71.8
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 9.4e-219 763.8 536 73.7
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 2.6e-216 755.7 534 73.2
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 2.6e-216 755.7 534 73.2
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 6.8e-209 731.1 536 70.3
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 1.0e-204 717.2 533 69.0
FAN19G1851 Fragaria x ananassa HOM05D005709 ORTHO05D006306 1.5e-203 713.4 539 69.0
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 3.6e-202 708.8 538 67.7
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 2.6e-200 702.6 537 67.2
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 5.8e-200 701.4 534 67.0
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 9.8e-200 700.7 409 85.8
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 2.4e-198 696.0 538 66.9
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 7.0e-198 694.5 539 67.3
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 9.2e-198 694.1 539 66.4
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 1.2e-197 693.7 535 65.2
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 2.7e-197 692.6 533 67.2
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 8.6e-196 687.6 533 66.2
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 1.5e-195 686.8 538 66.5
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 1.5e-192 676.8 537 65.4
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 7.1e-190 667.9 537 63.7
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 1.2e-189 667.2 536 63.2
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 4.6e-189 665.2 550 62.7
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 1.9e-187 659.8 526 64.1
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 5.6e-187 658.3 551 61.3
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 1.6e-186 656.8 526 63.3
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 1.1e-185 654.1 526 63.9
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 1.5e-184 650.2 534 62.0
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 2.6e-184 649.4 538 62.6
GSVIVG01007131001 Vitis vinifera HOM05D005709 ORTHO05D006306 2.6e-184 649.4 494 66.2
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 7.6e-184 647.9 538 63.6
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 1.3e-183 647.1 536 63.2
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 1.1e-182 644.0 539 61.8
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 1.4e-182 643.7 542 62.2
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 1.9e-182 643.3 543 61.3
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 1.9e-182 643.3 511 65.0
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 4.1e-182 642.1 544 61.6
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 1.6e-181 640.2 536 61.6
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 7.8e-181 637.9 537 63.5
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 5.1e-180 635.2 539 61.8
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 1.9e-179 633.3 545 60.6
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 1.2e-178 630.6 536 62.9
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 1.6e-178 630.2 536 61.4
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 1.6e-178 630.2 542 61.1
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 6.2e-178 628.2 543 60.4
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 1.4e-177 627.1 514 61.9
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 1.8e-177 626.7 512 62.7
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 3.1e-177 625.9 531 60.3
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 5.2e-177 625.2 537 61.1
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 5.2e-177 625.2 538 61.3
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 8.9e-177 624.4 538 59.9
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 8.9e-177 624.4 537 60.7
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 3.4e-176 622.5 537 60.7
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 6.4e-175 618.2 543 60.0
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 8.4e-175 617.8 503 61.8
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 8.4e-175 617.8 538 60.8
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 2.4e-174 616.3 524 59.5
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 7.1e-174 614.8 536 60.4
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 7.1e-174 614.8 542 58.3
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 1.2e-173 614.0 534 59.7
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 1.2e-173 614.0 521 59.7
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 3.5e-173 612.5 534 60.3
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 7.8e-173 611.3 543 58.6
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 1.7e-172 610.1 548 59.5
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 1.5e-171 607.1 541 58.0
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 2.8e-170 602.8 526 58.7
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 1.1e-169 600.9 517 58.0
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 2.4e-169 599.7 575 55.5
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 5.3e-169 598.6 505 59.2
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 9.0e-169 597.8 524 59.7
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 3.4e-168 595.9 510 58.4
Sc03g0000380 Simmondsia chinensis HOM05D005709 ORTHO05D006306 3.8e-167 592.4 485 61.4
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 2.4e-166 589.7 532 59.0
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 4.3e-163 578.9 495 59.4
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 5.6e-163 578.6 537 58.1
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 2.1e-162 576.6 539 55.1
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 2.0e-160 570.1 549 56.1
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 3.8e-159 565.8 565 53.3
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 8.4e-159 564.7 475 61.9
Lsat_1_v5_gn_2_70300 Lactuca sativa HOM05D005709 ORTHO05D006306 1.9e-155 553.5 504 56.5
Medtr4g125890 Medicago truncatula HOM05D005709 ORTHO05D006306 3.7e-154 549.3 537 58.8
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 1.5e-152 543.9 501 54.7
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 3.9e-148 529.3 438 63.0
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 4.8e-146 522.3 544 51.1
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 3.5e-141 506.1 568 50.5
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 4.6e-141 505.8 547 51.2
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 2.4e-137 493.4 568 50.0
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 2.9e-135 486.5 526 51.0
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 1.2e-133 481.1 533 48.2
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 1.2e-128 464.5 428 57.0
THA.LOC104809180 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 3.4e-128 463.0 388 62.9
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 9.4e-126 454.9 528 50.9
TPR.G36816 Trifolium pratense HOM05D005709 ORTHO05D006306 1.0e-119 434.9 291 74.2
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.4e-116 424.5 475 50.1
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 5.7e-115 419.1 537 43.8
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 8.8e-108 395.2 570 39.8
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 1.3e-98 364.8 555 40.4
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 1.6e-93 347.8 325 58.2
Dinv13596 Davidia involucrata HOM05D005709 ORTHO05D006306 1.4e-84 318.2 342 51.2
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 9.2e-81 305.4 522 38.1
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 6.6e-79 299.3 443 39.3
CBR_g78875 Chara braunii HOM05D005709 ORTHO05D006306 1.4e-76 291.6 516 37.4
HPP92_015330 Vanilla planifolia HOM05D005709 ORTHO05D006306 2.7e-72 277.3 340 48.8
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 6.6e-71 272.7 315 50.5
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 1.8e-68 264.6 265 56.6
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 1.6e-64 251.5 206 63.6
TPR.G36731 Trifolium pratense HOM05D005709 ORTHO05D006306 5.2e-60 236.5 170 74.1
BcaC01g02778 Brassica carinata HOM05D005709 ORTHO05D006306 2.6e-59 234.2 180 65.6
MBI16_g19593_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 3.2e-57 227.3 221 57.0
PSO210G2291 Papaver somniferum HOM05D005709 ORTHO05D006306 6.0e-56 223.0 379 39.3
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 1.3e-55 221.9 175 65.7
TAR381G1451 Trochodendron aralioides HOM05D005709 ORTHO05D006306 6.9e-52 209.5 149 69.1
Oeu031122.1 Olea europaea HOM05D005709 ORTHO05D006306 1.2e-51 208.8 196 55.6
Oeu002141.1 Olea europaea HOM05D005709 ORTHO05D006306 3.4e-51 207.2 175 62.3
THA.LOC104821549 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 6.0e-48 196.4 155 61.9
BcaC01g02779 Brassica carinata HOM05D005709 ORTHO05D006306 1.8e-44 184.9 122 66.4
Cre03.g145707 Chlamydomonas reinhardtii HOM05D005709 ORTHO05D006306 1.0e-39 169.1 320 34.1
Sed0017677 Sechium edule HOM05D005709 ORTHO05D006306 1.5e-35 155.2 312 38.8
PRCOL_00002122 Prasinoderma coloniale HOM05D005709 ORTHO05D006306 2.5e-22 111.3 578 27.5
TPR.G34440 Trifolium pratense HOM05D005709 ORTHO05D006306 1.5e-19 102.1 63 76.2
TPR.G25795 Trifolium pratense HOM05D005709 ORTHO05D006306 3.8e-18 97.4 63 73.0
CARHR215690 Cardamine hirsuta HOM05D005709 ORTHO05D006306 6.3e-13 80.1 55 70.9
SalBow5G5475 Salvia bowleyana HOM05D036480 ORTHO05D006306 4.1e-12 77.4 94 47.9


User provided reference genes

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