Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G145400 Phaseolus vulgaris HOM05D003210 ORTHO05D000001 1.9e-113 414.1 244 100.0
VMungo1215G2034 Vigna mungo HOM05D003210 ORTHO05D000001 1.4e-95 354.8 237 73.8
Glyma.09G200200 Glycine max HOM05D003210 ORTHO05D000001 1.4e-79 301.6 233 80.7
Glyma.01G021450 Glycine max HOM05D003210 ORTHO05D000001 4.6e-67 260.0 206 81.6
Psat3g169880 Pisum sativum HOM05D003210 ORTHO05D000001 3.0e-50 204.1 206 68.0
Ca_25227_v3 Cicer arietinum L. HOM05D003210 ORTHO05D000001 3.8e-45 187.2 240 57.9
Prupe.4G256300 Prunus persica HOM05D003210 ORTHO05D000001 5.1e-42 176.8 235 44.3
FAN28G0230 Fragaria x ananassa HOM05D003210 ORTHO05D000001 3.3e-41 174.1 228 40.4
Prupe.1G583300 Prunus persica HOM05D003210 ORTHO05D000001 2.2e-40 171.4 218 56.0
FvH4_1g06430 Fragaria vesca HOM05D003210 ORTHO05D000001 9.1e-39 166.0 224 39.7
FAN19G0968 Fragaria x ananassa HOM05D003210 ORTHO05D000001 9.1e-39 166.0 224 39.7
RcHm_v2.0_Chr2g0092171 Rosa chinensis HOM05D003210 ORTHO05D000001 7.7e-38 162.9 224 39.3
FvH4_7g04271 Fragaria vesca HOM05D003210 ORTHO05D000001 1.0e-37 162.5 203 41.9
FAN03G0748 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.0e-37 162.5 205 41.0
FAN20G1808 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.0e-37 162.5 234 38.9
FAN26G1074 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.3e-37 162.2 226 38.5
Phvul.008G101600 Phaseolus vulgaris HOM05D003210 ORTHO05D000001 2.2e-37 161.4 177 60.5
RcHm_v2.0_Chr1g0329241 Rosa chinensis HOM05D003210 ORTHO05D000001 5.5e-36 156.8 204 41.2
CsaV3_6G031450 Cucumis sativus L. HOM05D003210 ORTHO05D000001 4.7e-35 153.7 222 55.4
FAN26G0660 Fragaria x ananassa HOM05D000020 ORTHO05D000001 6.1e-35 153.3 207 49.8
MD08G1245900 Malus domestica HOM05D003210 ORTHO05D000001 7.9e-35 152.9 206 40.8
MD15G1441200 Malus domestica HOM05D003210 ORTHO05D000001 1.0e-34 152.5 206 42.7
MD11G1188000 Malus domestica HOM05D003210 ORTHO05D000001 1.4e-34 152.1 208 51.4
Haze_03893 Corylus avellana HOM05D003210 ORTHO05D000001 1.8e-34 151.8 196 63.8
Migut.H02282 Erythranthe guttata HOM05D003210 ORTHO05D000001 3.9e-34 150.6 204 57.8
Cpa.g.sc10.84 Carica papaya HOM05D003210 ORTHO05D000001 2.6e-33 147.9 208 57.7
Manes.12G124600 Manihot esculenta HOM05D003210 ORTHO05D000001 2.6e-33 147.9 207 59.4
FvH4_2g11090 Fragaria vesca HOM05D003210 ORTHO05D000001 1.7e-32 145.2 213 36.6
FAN24G1052 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.7e-32 145.2 213 36.6
Lj2g0010731 Lotus japonicus HOM05D003210 ORTHO05D000001 2.2e-32 144.8 229 58.1
VMungo1383G3073 Vigna mungo HOM05D003210 ORTHO05D000001 4.8e-32 143.7 177 62.1
CAN.G674.2 Capsicum annuum HOM05D003210 ORTHO05D000001 1.1e-31 142.5 195 52.3
PGSC0003DMG401028232 Solanum tuberosum HOM05D003210 ORTHO05D000001 1.4e-31 142.1 195 60.0
Sopen10g032390 Solanum pennellii HOM05D003210 ORTHO05D000001 1.8e-31 141.7 199 58.8
Cc03_g12590 Coffea canephora HOM05D003210 ORTHO05D000001 2.4e-31 141.4 207 58.0
Potri.006G124900 Populus trichocarpa HOM05D003210 ORTHO05D000001 7.0e-31 139.8 208 59.1
Sabra06G0098600 Salix brachista HOM05D003210 ORTHO05D000001 9.1e-31 139.4 237 52.7
Gohir.A12G085200 Gossypium hirsutum HOM05D003210 ORTHO05D000001 1.2e-30 139.0 205 56.1
TWI53G0425 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 1.2e-30 139.0 187 54.5
Solyc10g081880.3 Solanum lycopersicum HOM05D003210 ORTHO05D000001 1.5e-30 138.7 199 58.3
TWI74G0121 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 2.0e-30 138.3 208 58.2
Gorai.008G093300 Gossypium raimondii HOM05D003210 ORTHO05D000001 3.5e-30 137.5 205 55.6
Lalb_Chr09g0325941 Lupinus albus HOM05D003210 ORTHO05D000001 4.5e-30 137.1 233 55.4
TPR.G36733 Trifolium pratense HOM05D003210 ORTHO05D000001 7.7e-30 136.3 228 51.8
Nitab4.5_0002364g0030 Nicotiana tabacum HOM05D003210 ORTHO05D000001 1.7e-29 135.2 195 57.4
Peaxi162Scf00370g00062 Petunia axillaris HOM05D003210 ORTHO05D000001 2.2e-29 134.8 202 58.4
AL7G34260 Arabidopsis lyrata HOM05D003210 ORTHO05D000001 5.0e-29 133.7 223 52.9
AUR62039467 Chenopodium quinoa HOM05D003210 ORTHO05D000001 5.0e-29 133.7 213 35.7
MELO3C026530.2 Cucumis melo HOM05D003210 ORTHO05D000001 5.0e-29 133.7 212 54.2
Lalb_Chr19g0125341 Lupinus albus HOM05D003210 ORTHO05D000001 5.0e-29 133.7 178 60.1
Medtr5g031740 Medicago truncatula HOM05D003210 ORTHO05D000001 1.4e-28 132.1 227 52.9
Aqoxy6G00832 Aquilegia oxysepala HOM05D003210 ORTHO05D000001 2.5e-28 131.3 192 35.9
AUR62027713 Chenopodium quinoa HOM05D003210 ORTHO05D000001 3.2e-28 131.0 208 36.5
Nitab4.5_0000574g0030 Nicotiana tabacum HOM05D003210 ORTHO05D000001 5.5e-28 130.2 195 56.4
GSVIVG01038280001 Vitis vinifera HOM05D003210 ORTHO05D000001 1.6e-27 128.6 198 54.5
Nitab4.5_0005257g0020 Nicotiana tabacum HOM05D003210 ORTHO05D000001 2.1e-27 128.3 186 58.6
CSS0000965 Camellia sinensis var. sinensis HOM05D003210 ORTHO05D000001 2.7e-27 127.9 207 56.0
SHI21874 Sapria himalayana HOM05D003210 ORTHO05D000001 3.0e-26 124.4 174 43.7
Eucgr.H02438 Eucalyptus grandis HOM05D003210 ORTHO05D000001 1.1e-25 122.5 238 45.0
Sp2g28660 Schrenkiella parvula HOM05D003210 ORTHO05D000001 1.5e-25 122.1 204 35.8
Carub.0008s2641 Capsella rubella HOM05D003210 ORTHO05D000001 5.7e-25 120.2 204 36.8
AT5G65560 Arabidopsis thaliana HOM05D003210 ORTHO05D000001 1.1e-23 115.9 173 35.3
AL8G43160 Arabidopsis lyrata HOM05D003210 ORTHO05D000001 3.1e-23 114.4 173 34.7
PGSC0003DMG400023572 Solanum tuberosum HOM05D003210 ORTHO05D000001 1.6e-22 112.1 203 53.2
BraA06t26165Z Brassica rapa HOM05D003210 ORTHO05D000001 1.7e-21 108.6 202 49.5
SalBow3G1735 Salvia bowleyana HOM05D003210 ORTHO05D000001 2.2e-21 108.2 176 56.2
HanXRQChr04g0122161 Helianthus annuus HOM05D003210 ORTHO05D000001 2.9e-21 107.8 207 50.7
A06p32400 Brassica napus HOM05D003210 ORTHO05D000001 3.8e-21 107.5 202 49.0
Lsat_1_v5_gn_7_6901 Lactuca sativa HOM05D003210 ORTHO05D000001 1.5e-20 105.5 207 52.2
HanXRQChr06g0169331 Helianthus annuus HOM05D003210 ORTHO05D000001 1.9e-20 105.1 207 49.8
arahy.Tifrunner.gnm1.ann1.PFI7NN Arachis hypogaea HOM05D003210 ORTHO05D000001 2.5e-20 104.8 85 62.4
arahy.Tifrunner.gnm1.ann1.SQ2KUV Arachis hypogaea HOM05D003210 ORTHO05D000001 2.5e-20 104.8 85 62.4
BcaC01g02798 Brassica carinata HOM05D003210 ORTHO05D000001 1.2e-19 102.4 174 33.9
C03p60210 Brassica napus HOM05D003210 ORTHO05D000001 1.2e-19 102.4 174 33.9
BolC3t18283H Brassica oleracea HOM05D003210 ORTHO05D000001 1.2e-19 102.4 174 33.9
THA.LOC104798889 Tarenaya hassleriana HOM05D003210 ORTHO05D000001 6.1e-19 100.1 172 58.1
FAN23G1801 Fragaria x ananassa HOM05D003210 ORTHO05D000001 8.8e-18 96.3 107 47.7
COL.COLO4_27373 Corchorus olitorius HOM05D003210 ORTHO05D000001 2.0e-17 95.1 153 49.0
Oeu017113.2 Olea europaea HOM05D000258 ORTHO05D000001 9.7e-17 92.8 71 54.9
AL2G37540 Arabidopsis lyrata HOM05D003210 ORTHO05D000001 4.8e-16 90.5 86 48.8
Carub.0002s2422 Capsella rubella HOM05D003210 ORTHO05D000001 6.3e-16 90.1 208 47.6
Gohir.D12G079600 Gossypium hirsutum HOM05D003210 ORTHO05D000001 5.3e-15 87.0 205 47.3
Oeu040066.1 Olea europaea HOM05D003210 ORTHO05D000001 2.7e-14 84.7 170 47.1
AL3G14030 Arabidopsis lyrata HOM05D003210 ORTHO05D000001 4.5e-14 84.0 205 46.8
EL10Ac6g15188 Beta vulgaris HOM05D003210 ORTHO05D000001 4.5e-14 84.0 167 32.3
Oeu017112.4 Olea europaea HOM05D000167 ORTHO05D000465 4.5e-14 84.0 163 31.9
Zm00001eb183350 Zea mays HOM05D003210 ORTHO05D000001 1.0e-13 82.8 224 36.2
Prupe.3G201200 Prunus persica HOM05D003210 ORTHO05D000001 2.2e-13 81.6 175 27.4
Os02g0582300 Oryza sativa ssp. japonica HOM05D003210 ORTHO05D000001 8.5e-13 79.7 214 25.2
BcaC01g02795 Brassica carinata HOM05D003210 ORTHO05D032134 5.5e-12 77.0 185 47.6
Zm00001eb037970 Zea mays HOM05D003210 ORTHO05D000001 9.4e-12 76.3 180 41.7
PGR102G2337 Punica granatum HOM05D003210 ORTHO05D000001 1.2e-11 75.9 82 47.6
Sc06g0009870 Simmondsia chinensis HOM05D003210 ORTHO05D000001 1.2e-11 75.9 177 23.7
MELO3C013188.2 Cucumis melo HOM05D003210 ORTHO05D000001 1.0e-10 72.8 231 37.7
CsaV3_7G021590 Cucumis sativus L. HOM05D003210 ORTHO05D000001 6.8e-10 70.1 222 37.8
Thecc.01G088700 Theobroma cacao HOM05D003210 ORTHO05D000001 6.8e-10 70.1 72 50.0
FvH4_6g41080 Fragaria vesca HOM05D003210 ORTHO05D000001 1.2e-09 69.3 178 24.7
FAN14G2019 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.2e-09 69.3 178 24.7
CARHR279540 Cardamine hirsuta HOM05D003210 ORTHO05D000001 3.4e-09 67.8 203 25.6
Duzib264G1117 Durio zibethinus HOM05D003210 ORTHO05D000001 4.4e-09 67.4 75 49.3
Thecc.01G191200 Theobroma cacao HOM05D003210 ORTHO05D000001 7.5e-09 66.6 173 33.5
CiPaw.08G142200 Carya illinoinensis HOM05D003210 ORTHO05D000001 9.8e-09 66.2 71 52.1
Ciclev10018770m.g Citrus clementina HOM05D003210 ORTHO05D000001 6.3e-08 63.5 63 54.0
THA.LOC104819041 Tarenaya hassleriana HOM05D003210 ORTHO05D000001 6.3e-08 63.5 81 35.8
QL12p037893 Quercus lobata HOM05D003210 ORTHO05D000001 8.3e-08 63.2 71 46.5
MD03G1170600 Malus domestica HOM05D003210 ORTHO05D000001 1.1e-07 62.8 53 58.5
Dinv34734 Davidia involucrata HOM05D003210 ORTHO05D000001 1.8e-07 62.0 65 47.7
Atru.chr4.1465 Acer truncatum HOM05D003210 ORTHO05D000001 2.4e-07 61.6 74 45.9
SGA_v2.0_scaffold181G39736 Striga asiatica HOM05D003210 ORTHO05D000001 5.4e-07 60.5 77 44.2
CANSAT01G1059 Cannabis sativa HOM05D003210 ORTHO05D000001 7.0e-07 60.1 207 44.0
Lj3C22T6 Lonicera japonica HOM05D003210 ORTHO05D000001 9.1e-07 59.7 73 43.8
Cfa012658 Carpinus fangiana HOM05D003210 ORTHO05D000001 1.2e-06 59.3 177 40.1
Haze_07989 Corylus avellana HOM05D003210 ORTHO05D000001 1.2e-06 59.3 177 40.7
Sed0013166 Sechium edule HOM05D003210 ORTHO05D000001 1.2e-06 59.3 170 41.2
TAR625G1193 Trochodendron aralioides HOM05D003210 ORTHO05D000001 1.2e-06 59.3 74 41.9
ClCG08G009320 Citrullus lanatus HOM05D003210 ORTHO05D000001 1.6e-06 58.9 77 42.9
Ciclev10014182m.g Citrus clementina HOM05D003210 ORTHO05D000001 1.6e-06 58.9 177 36.2
CsaV3_7G023730 Cucumis sativus L. HOM05D003210 ORTHO05D000001 1.6e-06 58.9 178 42.1
Sed0026111 Sechium edule HOM05D003210 ORTHO05D000001 1.6e-06 58.9 78 37.2
ClCG02G002730 Citrullus lanatus HOM05D003210 ORTHO05D000001 2.0e-06 58.5 164 43.3
Os06g0690900 Oryza sativa ssp. japonica HOM05D003210 ORTHO05D000001 3.5e-06 57.8 188 43.6
SGA_v2.0_scaffold181G39678 Striga asiatica HOM05D003210 ORTHO05D000001 3.5e-06 57.8 70 37.1
MELO3C024111.2 Cucumis melo HOM05D003210 ORTHO05D000001 7.7e-06 56.6 176 43.2
Nitab4.5_0002165g0010 Nicotiana tabacum HOM05D003210 ORTHO05D000001 7.7e-06 56.6 134 58.2


User provided reference genes

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