Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G142400 Phaseolus vulgaris HOM05D002915 ORTHO05D003004 3.5e-107 391.7 210 100.0
Phvul.003G180500 Phaseolus vulgaris HOM05D002915 ORTHO05D003004 1.5e-81 306.6 203 73.9
Phvul.L006943 Phaseolus vulgaris HOM05D002915 ORTHO05D003004 5.6e-81 304.7 206 72.3
Phvul.003G180400 Phaseolus vulgaris HOM05D002915 ORTHO05D003004 6.4e-61 238.0 203 63.1
Lj4g0025234 Lotus japonicus HOM05D002915 ORTHO05D003004 9.0e-39 164.5 200 42.5
Lj4g0001673 Lotus japonicus HOM05D002915 ORTHO05D003004 1.5e-38 163.7 194 42.8
Lj1g0028201 Lotus japonicus HOM05D002915 ORTHO05D003004 4.5e-38 162.2 197 41.1
Lj4g0002182 Lotus japonicus HOM05D002915 ORTHO05D003004 1.0e-37 161.0 195 41.0
Lj1g0003622 Lotus japonicus HOM05D002915 ORTHO05D003004 1.4e-36 157.1 197 40.1
Lj4g0014849 Lotus japonicus HOM05D002915 ORTHO05D003004 3.2e-36 156.0 198 41.9
Psat0s1573g0120 Pisum sativum HOM05D002915 ORTHO05D003004 1.6e-35 153.7 199 39.7
Lj2g0014982 Lotus japonicus HOM05D002915 ORTHO05D003004 4.6e-35 152.1 200 40.5
Lj6g0013707 Lotus japonicus HOM05D002915 ORTHO05D003004 2.3e-34 149.8 177 44.1
Lj2g0026934 Lotus japonicus HOM05D002915 ORTHO05D003004 3.9e-34 149.1 176 42.0
Lj3g0023229 Lotus japonicus HOM05D002915 ORTHO05D003004 1.5e-33 147.1 184 42.4
Lj5g0020165 Lotus japonicus HOM05D002915 ORTHO05D003004 4.3e-33 145.6 196 38.3
Lj3g0011377 Lotus japonicus HOM05D002915 ORTHO05D003004 5.7e-33 145.2 174 42.0
Lalb_Chr18g0050831 Lupinus albus HOM05D002915 ORTHO05D003004 5.7e-33 145.2 199 39.7
Lj3g0026757 Lotus japonicus HOM05D002915 ORTHO05D003004 9.6e-33 144.4 173 41.6
Lj5g0016376 Lotus japonicus HOM05D002915 ORTHO05D003004 9.6e-33 144.4 205 38.0
Lj6g0019512 Lotus japonicus HOM05D002915 ORTHO05D003004 6.2e-32 141.7 176 40.3
Lj5g0000576 Lotus japonicus HOM05D002915 ORTHO05D003004 1.1e-31 141.0 198 37.4
Psat0s3757g0040 Pisum sativum HOM05D002915 ORTHO05D003004 7.6e-30 134.8 239 34.7
TPR.G23884 Trifolium pratense HOM05D002915 ORTHO05D003004 1.3e-29 134.0 191 36.1
Psat0s6185g0040 Pisum sativum HOM05D002915 ORTHO05D003004 2.2e-29 133.3 238 32.8
Lalb_Chr10g0105601 Lupinus albus HOM05D002915 ORTHO05D003004 7.1e-28 128.3 173 37.6
Glyma.17G083900 Glycine max HOM05D002915 ORTHO05D003004 1.6e-24 117.1 197 36.0
Lalb_Chr13g0303601 Lupinus albus HOM05D002915 ORTHO05D003004 3.7e-24 115.9 200 30.5
Medtr5g033770 Medicago truncatula HOM05D002915 ORTHO05D003004 1.5e-22 110.5 191 29.3
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 2.6e-22 109.8 107 49.5
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 3.4e-22 109.4 200 33.5
Glyma.07G247800 Glycine max HOM05D002915 ORTHO05D003004 1.3e-21 107.5 167 31.1
Sabra13G0007400 Salix brachista HOM05D002915 ORTHO05D003004 1.3e-21 107.5 163 33.7
Lj2g0021070 Lotus japonicus HOM05D002915 ORTHO05D003004 2.9e-21 106.3 192 32.3
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 2.9e-21 106.3 168 32.1
Prupe.1G137300 Prunus persica HOM05D002915 ORTHO05D003004 3.8e-21 105.9 209 31.6
Medtr4g119850 Medicago truncatula HOM05D002915 ORTHO05D003004 5.0e-21 105.5 192 29.7
TPR.G19429 Trifolium pratense HOM05D002915 ORTHO05D003004 1.1e-20 104.4 194 30.4
TPR.G3196 Trifolium pratense HOM05D002915 ORTHO05D003004 1.1e-20 104.4 192 29.2
Potri.013G008800 Populus trichocarpa HOM05D002915 ORTHO05D003004 1.4e-20 104.0 163 33.1
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 2.5e-20 103.2 189 29.6
Glyma.02G238900 Glycine max HOM05D002915 ORTHO05D003004 4.2e-20 102.4 157 35.7
Potri.001G321400 Populus trichocarpa HOM05D002915 ORTHO05D003004 1.6e-19 100.5 163 31.3
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 2.7e-19 99.8 189 28.6
Psat4g025920 Pisum sativum HOM05D002915 ORTHO05D003004 2.7e-19 99.8 202 28.7
Lj6A815T43 Lonicera japonica HOM05D002915 ORTHO05D003004 4.6e-19 99.0 160 36.9
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 6.1e-19 98.6 164 31.7
Actinidia25760 Actinidia chinensis HOM05D002915 ORTHO05D003004 6.1e-19 98.6 179 31.8
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 6.1e-19 98.6 187 29.4
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 1.8e-18 97.1 167 31.1
Atru.chr1.712 Acer truncatum HOM05D002915 ORTHO05D003004 2.3e-18 96.7 164 31.1
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 3.0e-18 96.3 108 43.5
Lj6A821T72 Lonicera japonica HOM05D002915 ORTHO05D003004 6.7e-18 95.1 87 44.8
Lj6g0021938 Lotus japonicus HOM05D002915 ORTHO05D003004 6.7e-18 95.1 197 32.5
Lj4g0013622 Lotus japonicus HOM05D002915 ORTHO05D003004 8.8e-18 94.7 190 31.1
Lj1g0000366 Lotus japonicus HOM05D002915 ORTHO05D003004 1.1e-17 94.4 196 32.1
Lj4g0001937 Lotus japonicus HOM05D002915 ORTHO05D003004 1.1e-17 94.4 190 31.1
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.0e-17 93.6 211 30.3
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 3.3e-17 92.8 190 29.5
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 4.3e-17 92.4 112 41.1
TWI09G1418 Tripterygium wilfordii HOM05D002915 ORTHO05D003004 4.3e-17 92.4 180 30.6
ECA233G1149 Erigeron canadensis HOM05D000825 ORTHO05D003004 5.7e-17 92.0 108 42.6
Lj4g0005635 Lotus japonicus HOM05D002915 ORTHO05D003004 7.4e-17 91.7 190 30.5
Lj4g0008862 Lotus japonicus HOM05D002915 ORTHO05D003004 9.7e-17 91.3 204 26.0
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 9.7e-17 91.3 184 30.4
Rhsim12G0105300 Rhododendron simsii HOM05D002915 ORTHO05D003004 9.7e-17 91.3 108 43.5
Medtr3g075360 Medicago truncatula HOM05D002915 ORTHO05D003004 1.7e-16 90.5 200 27.0
Sed0005801 Sechium edule HOM05D002915 ORTHO05D003004 1.7e-16 90.5 164 30.5
arahy.Tifrunner.gnm1.ann1.JTPM3R Arachis hypogaea HOM05D000176 ORTHO05D000106 2.8e-16 89.7 150 36.0
Glyma.17G026300 Glycine max HOM05D002915 ORTHO05D003004 2.8e-16 89.7 172 29.7
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 2.8e-16 89.7 125 40.8
Rhsim13G0213700 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.8e-16 89.7 108 43.5
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 3.7e-16 89.4 184 26.6
MD16G1170100 Malus domestica HOM05D002915 ORTHO05D003004 4.8e-16 89.0 179 27.4
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 4.8e-16 89.0 108 42.6
Lj6g0001752 Lotus japonicus HOM05D002915 ORTHO05D003004 6.3e-16 88.6 201 29.9
FAN19G1392 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.1e-15 87.8 105 39.0
MD16G1169500 Malus domestica HOM05D002915 ORTHO05D003004 1.1e-15 87.8 166 28.3
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 1.4e-15 87.4 184 29.3
CsaV3_1G004340 Cucumis sativus L. HOM05D002915 ORTHO05D003004 1.4e-15 87.4 177 29.9
PGR142G3351 Punica granatum HOM05D002915 ORTHO05D003004 1.4e-15 87.4 182 28.6
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.8e-15 87.0 211 28.9
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.8e-15 87.0 211 28.9
ClCG11G013100 Citrullus lanatus HOM05D002915 ORTHO05D003004 3.1e-15 86.3 120 38.3
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 3.1e-15 86.3 186 28.5
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 4.1e-15 85.9 179 28.5
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 4.1e-15 85.9 179 28.5
Atru.chr11.2288 Acer truncatum HOM05D002915 ORTHO05D003004 4.1e-15 85.9 163 28.8
Cc08_g03020 Coffea canephora HOM05D002915 ORTHO05D003004 5.3e-15 85.5 187 36.9
RcHm_v2.0_Chr4g0422141 Rosa chinensis HOM05D002915 ORTHO05D003004 5.3e-15 85.5 162 29.0
HanXRQChr08g0207481 Helianthus annuus HOM05D002915 ORTHO05D003004 6.9e-15 85.1 100 42.0
Thecc.09G039200 Theobroma cacao HOM05D002915 ORTHO05D003004 9.1e-15 84.7 176 29.5
PSO339G6727 Papaver somniferum HOM05D002915 ORTHO05D003004 1.2e-14 84.3 96 37.5
TAR629G0058 Trochodendron aralioides HOM05D002915 ORTHO05D003004 1.2e-14 84.3 110 39.1
Thecc.03G155900 Theobroma cacao HOM05D002915 ORTHO05D003004 1.5e-14 84.0 110 40.9
Ciclev10033456m.g Citrus clementina HOM05D002915 ORTHO05D003004 2.0e-14 83.6 154 31.2
Cc00_g21400 Coffea canephora HOM05D002915 ORTHO05D003004 2.0e-14 83.6 183 28.4
Aqoxy1G01229 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 2.6e-14 83.2 103 39.8
Cc03_g08730 Coffea canephora HOM05D002915 ORTHO05D003004 2.6e-14 83.2 166 30.1
PSO384G2811 Papaver somniferum HOM05D002915 ORTHO05D003004 3.4e-14 82.8 96 37.5
PSO384G3355 Papaver somniferum HOM05D002915 ORTHO05D003004 3.4e-14 82.8 96 37.5
Gohir.A11G040100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 4.5e-14 82.4 190 29.5
Ciclev10006753m.g Citrus clementina HOM05D002915 ORTHO05D003004 5.9e-14 82.0 162 30.2
CsaV3_5G029620 Cucumis sativus L. HOM05D002915 ORTHO05D003004 1.0e-13 81.3 164 32.3
FAN26G0404 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.0e-13 81.3 107 37.4
Medtr4g112590 Medicago truncatula HOM05D002915 ORTHO05D003004 1.0e-13 81.3 184 32.1
Gorai.007G046700 Gossypium raimondii HOM05D002915 ORTHO05D003004 1.3e-13 80.9 190 30.5
MELO3C029741.2 Cucumis melo HOM05D002915 ORTHO05D003004 1.7e-13 80.5 164 31.1
MELO3C034049.2 Cucumis melo HOM05D002915 ORTHO05D003004 2.2e-13 80.1 166 31.9
MELO3C011803.2 Cucumis melo HOM05D002915 ORTHO05D003004 3.8e-13 79.3 164 30.5
Glyma.07G247700 Glycine max HOM05D002915 ORTHO05D003004 3.8e-13 79.3 161 26.7
Gohir.A09G111900 Gossypium hirsutum HOM05D002915 ORTHO05D003004 3.8e-13 79.3 195 28.7
FAN17G1773 Fragaria x ananassa HOM05D002915 ORTHO05D003004 6.5e-13 78.6 120 34.2
Duzib168G1329 Durio zibethinus HOM05D002915 ORTHO05D003004 8.5e-13 78.2 174 28.2
Gohir.D09G108500 Gossypium hirsutum HOM05D002915 ORTHO05D003004 8.5e-13 78.2 195 29.2
Hund03449 Selenicereus undatus HOM05D002915 ORTHO05D003004 1.4e-12 77.4 183 26.2
Haze_14809 Corylus avellana HOM05D002915 ORTHO05D003004 1.9e-12 77.0 84 40.5
Duzib150G0710 Durio zibethinus HOM05D002915 ORTHO05D003004 1.9e-12 77.0 167 27.5
PSO832G1590 Papaver somniferum HOM05D002915 ORTHO05D003004 1.9e-12 77.0 92 34.8
SGA_v2.0_scaffold169G38697 Striga asiatica HOM05D002915 ORTHO05D003004 1.9e-12 77.0 184 28.3
Cc02_g04260 Coffea canephora HOM05D002915 ORTHO05D003004 3.2e-12 76.3 182 25.8
Aqoxy7G00055 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 4.2e-12 75.9 86 38.4
Cc00_g09710 Coffea canephora HOM05D002915 ORTHO05D003004 4.2e-12 75.9 90 38.9
Duzib168G1942 Durio zibethinus HOM05D002915 ORTHO05D003004 4.2e-12 75.9 174 27.6
Aqoxy1G00479 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 5.5e-12 75.5 186 26.9
Cc11_g03110 Coffea canephora HOM05D002915 ORTHO05D003004 5.5e-12 75.5 89 38.2
COL.COLO4_36468 Corchorus olitorius HOM05D002915 ORTHO05D003004 5.5e-12 75.5 107 40.2
Gorai.006G126200 Gossypium raimondii HOM05D002915 ORTHO05D003004 5.5e-12 75.5 195 28.7
PSO782G5303 Papaver somniferum HOM05D002915 ORTHO05D003004 5.5e-12 75.5 91 35.2
Gohir.D09G108400 Gossypium hirsutum HOM05D002915 ORTHO05D003004 7.2e-12 75.1 195 27.7
Gorai.006G126100 Gossypium raimondii HOM05D002915 ORTHO05D003004 7.2e-12 75.1 185 27.6
SGA_v2.0_scaffold51G18778 Striga asiatica HOM05D002915 ORTHO05D003004 7.2e-12 75.1 166 28.3
TPR.G19430 Trifolium pratense HOM05D002915 ORTHO05D003004 7.2e-12 75.1 117 31.6
Aqoxy4G02244 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 9.4e-12 74.7 97 35.1
FAN12G2317 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.2e-11 74.3 105 36.2
Migut.C00066 Erythranthe guttata HOM05D002915 ORTHO05D003004 2.1e-11 73.6 199 24.6
Migut.H01084 Erythranthe guttata HOM05D002915 ORTHO05D003004 2.1e-11 73.6 199 24.1
Thhalv10019573m.g Eutrema salsugineum HOM05D002915 ORTHO05D003004 2.1e-11 73.6 88 36.4
CAN.G853.27 Capsicum annuum HOM05D002915 ORTHO05D003004 2.7e-11 73.2 106 34.0
FAN07G0523 Fragaria x ananassa HOM05D002915 ORTHO05D003004 2.7e-11 73.2 97 33.0
THA.LOC104810144 Tarenaya hassleriana HOM05D002915 ORTHO05D003004 2.7e-11 73.2 123 29.3
CAN.G1143.27 Capsicum annuum HOM05D002915 ORTHO05D003004 3.6e-11 72.8 89 36.0
Gohir.D11G043350 Gossypium hirsutum HOM05D002915 ORTHO05D003004 3.6e-11 72.8 190 28.9
Medtr4g123430 Medicago truncatula HOM05D002915 ORTHO05D003004 3.6e-11 72.8 165 27.9
Migut.C00063 Erythranthe guttata HOM05D002915 ORTHO05D003004 4.7e-11 72.4 184 25.0
PGSC0003DMG400021580 Solanum tuberosum HOM05D002915 ORTHO05D003004 4.7e-11 72.4 170 25.9
Gohir.A05G169100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 6.1e-11 72.0 166 28.3
Oeu033490.1 Olea europaea HOM05D002915 ORTHO05D003004 7.9e-11 71.6 103 35.9
arahy.Tifrunner.gnm1.ann1.J68HPB Arachis hypogaea HOM05D002915 ORTHO05D003004 1.0e-10 71.2 116 36.2
Cc05_g03590 Coffea canephora HOM05D002915 ORTHO05D003004 1.4e-10 70.9 188 26.1
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 1.8e-10 70.5 86 40.7
AT1G74875 Arabidopsis thaliana HOM05D002915 ORTHO05D003004 2.3e-10 70.1 75 37.3
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 2.3e-10 70.1 106 34.0
Migut.F00476 Erythranthe guttata HOM05D002915 ORTHO05D003004 2.3e-10 70.1 196 24.0
Thhalv10019642m.g Eutrema salsugineum HOM05D002915 ORTHO05D003004 2.3e-10 70.1 111 35.1
FAN23G0131 Fragaria x ananassa HOM05D002915 ORTHO05D003004 3.0e-10 69.7 92 35.9
Sp5g30010 Schrenkiella parvula HOM05D002915 ORTHO05D003004 5.1e-10 68.9 117 32.5
PGSC0003DMG400037269 Solanum tuberosum HOM05D002915 ORTHO05D003004 5.1e-10 68.9 109 35.8
Cpa.g.sc3.322 Carica papaya HOM05D002915 ORTHO05D003004 6.7e-10 68.6 86 37.2
Thecc.06G218700 Theobroma cacao HOM05D002915 ORTHO05D003004 1.1e-09 67.8 165 26.7
Cpa.g.sc85.123 Carica papaya HOM05D002915 ORTHO05D003004 1.5e-09 67.4 130 30.8
DCAR_018111 Daucus carota HOM05D002915 ORTHO05D003004 1.5e-09 67.4 99 37.4
Sopen04g019620 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-09 66.6 89 39.3
PGSC0003DMG400043877 Solanum tuberosum HOM05D002915 ORTHO05D003004 2.6e-09 66.6 162 27.2
Gohir.D05G172300 Gossypium hirsutum HOM05D002915 ORTHO05D003004 3.3e-09 66.2 164 26.8
TAR374G0847 Trochodendron aralioides HOM05D002915 ORTHO05D003004 4.4e-09 65.9 98 34.7
Gorai.009G177500 Gossypium raimondii HOM05D002915 ORTHO05D003004 5.7e-09 65.5 164 26.8
DCAR_018110 Daucus carota HOM05D002915 ORTHO05D003004 7.4e-09 65.1 100 37.0
TPR.G30653 Trifolium pratense HOM05D002915 ORTHO05D003004 1.7e-08 63.9 142 27.5
CSS0048418 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 2.8e-08 63.2 121 28.1
CANSAT64G2697 Cannabis sativa HOM05D002915 ORTHO05D003004 4.8e-08 62.4 179 24.6
Medtr3g069260 Medicago truncatula HOM05D002915 ORTHO05D003004 6.3e-08 62.0 79 38.0
Eucgr.G01392 Eucalyptus grandis HOM05D002915 ORTHO05D003004 8.2e-08 61.6 126 28.6
PGSC0003DMG400019090 Solanum tuberosum HOM05D002915 ORTHO05D003004 1.4e-07 60.8 84 39.3
TPR.G13381 Trifolium pratense HOM05D002915 ORTHO05D003004 1.4e-07 60.8 108 32.4
FAN28G1700 Fragaria x ananassa HOM05D002915 ORTHO05D003004 3.1e-07 59.7 79 35.4
FAN28G2009 Fragaria x ananassa HOM05D002915 ORTHO05D003004 3.1e-07 59.7 79 35.4
FAN28G2017 Fragaria x ananassa HOM05D002915 ORTHO05D003004 3.1e-07 59.7 79 35.4
CARHR046130 Cardamine hirsuta HOM05D002915 ORTHO05D003004 1.2e-06 57.8 116 26.7
AL2G26290 Arabidopsis lyrata HOM05D002915 ORTHO05D003004 2.6e-06 56.6 115 28.7
Eucgr.G01570 Eucalyptus grandis HOM05D002915 ORTHO05D003004 2.6e-06 56.6 71 36.6
HanXRQChr05g0131161 Helianthus annuus HOM05D002915 ORTHO05D003004 3.5e-06 56.2 138 25.4
PGSC0003DMG400040843 Solanum tuberosum HOM05D002915 ORTHO05D003004 3.5e-06 56.2 86 34.9


User provided reference genes

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