Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G142000 Phaseolus vulgaris HOM05D008115 ORTHO05D010112 1.7e-100 369.4 199 100.0
VMungo1215G1226 Vigna mungo HOM05D008115 ORTHO05D010112 1.3e-84 316.6 199 82.9
Glyma.09G204000 Glycine max HOM05D008115 ORTHO05D010112 8.4e-79 297.4 199 79.4
Lj2g0018003 Lotus japonicus HOM05D008115 ORTHO05D010112 1.3e-50 203.8 204 62.3
Medtr5g030520 Medicago truncatula HOM05D008115 ORTHO05D010112 4.4e-43 178.7 204 56.9
arahy.Tifrunner.gnm1.ann1.6THG3J Arachis hypogaea HOM05D008115 ORTHO05D010112 2.5e-38 162.9 205 52.7
arahy.Tifrunner.gnm1.ann1.FLG01L Arachis hypogaea HOM05D008115 ORTHO05D010112 2.5e-38 162.9 205 52.7
Psat2g136120 Pisum sativum HOM05D008115 ORTHO05D010112 3.6e-37 159.1 212 52.4
TPR.G15446 Trifolium pratense HOM05D008115 ORTHO05D010112 4.8e-34 148.7 189 54.0
Glyma.01G018900 Glycine max HOM05D008115 ORTHO05D010112 7.8e-24 114.8 102 65.7
Prupe.5G036900 Prunus persica HOM05D008115 ORTHO05D010112 1.1e-22 110.9 210 39.0
Potri.003G091600 Populus trichocarpa HOM05D008115 ORTHO05D010112 7.3e-22 108.2 198 41.4
Sabra03G0061200 Salix brachista HOM05D001142 ORTHO05D003453 2.6e-19 99.8 197 39.6
CiPaw.12G063600 Carya illinoinensis HOM05D008115 ORTHO05D010112 3.4e-19 99.4 217 38.7
Ciclev10012855m.g Citrus clementina HOM05D008115 ORTHO05D010112 5.7e-19 98.6 211 37.9
FAN13G1458 Fragaria x ananassa HOM05D008115 ORTHO05D010112 5.7e-19 98.6 233 34.8
Sed0022703 Sechium edule HOM05D008115 ORTHO05D010112 7.5e-19 98.2 208 36.1
FAN08G1703 Fragaria x ananassa HOM05D008115 ORTHO05D010112 4.9e-18 95.5 215 34.4
FAN04G2182 Fragaria x ananassa HOM05D008115 ORTHO05D010112 6.4e-18 95.1 214 34.6
FAN18G3637 Fragaria x ananassa HOM05D008115 ORTHO05D010112 1.4e-17 94.0 222 36.5
Gohir.A08G156700 Gossypium hirsutum HOM05D008115 ORTHO05D010112 5.4e-17 92.0 196 38.8
Gohir.D08G177100 Gossypium hirsutum HOM05D008115 ORTHO05D010112 5.4e-17 92.0 196 38.8
Gorai.004G185300 Gossypium raimondii HOM05D008115 ORTHO05D010112 5.4e-17 92.0 196 38.8
QL12p005248 Quercus lobata HOM05D008115 ORTHO05D010112 7.0e-17 91.7 194 38.7
QL12p005415 Quercus lobata HOM05D008115 ORTHO05D010112 7.0e-17 91.7 194 38.7
Thecc.03G228100 Theobroma cacao HOM05D008115 ORTHO05D010112 8.6e-15 84.7 192 37.5
TWI15G1224 Tripterygium wilfordii HOM05D008115 ORTHO05D010112 2.5e-14 83.2 201 36.3
Duzib205G0809 Durio zibethinus HOM05D008115 ORTHO05D010112 5.6e-14 82.0 192 34.4
Sp2g11610 Schrenkiella parvula HOM05D008115 ORTHO05D010112 1.1e-12 77.8 196 33.2
Thhalv10001038m.g Eutrema salsugineum HOM05D008115 ORTHO05D010112 1.8e-12 77.0 193 32.1
Dinv28956 Davidia involucrata HOM05D000381 ORTHO05D010112 2.3e-12 76.6 203 33.5
CsaV3_3G049200 Cucumis sativus L. HOM05D008115 ORTHO05D010112 4.0e-12 75.9 218 37.2
Carub.0008s0112 Capsella rubella HOM05D008115 ORTHO05D010112 8.9e-12 74.7 199 32.7
Lalb_Chr05g0216121 Lupinus albus HOM05D008115 ORTHO05D010112 1.2e-11 74.3 124 45.2
RcHm_v2.0_Chr7g0209671 Rosa chinensis HOM05D008115 ORTHO05D010112 1.5e-11 73.9 86 46.5
CARHR174700 Cardamine hirsuta HOM05D008115 ORTHO05D010112 4.4e-11 72.4 193 31.1
GSVIVG01013162001 Vitis vinifera HOM05D008115 ORTHO05D010112 9.8e-11 71.2 195 31.8
BcaC03g16890 Brassica carinata HOM05D008115 ORTHO05D010112 1.3e-10 70.9 194 28.9
C02p47870 Brassica napus HOM05D008115 ORTHO05D010112 1.3e-10 70.9 194 28.9
BolC2t10820H Brassica oleracea HOM05D008115 ORTHO05D010112 1.3e-10 70.9 194 28.9
PGR042G2453 Punica granatum HOM05D008115 ORTHO05D010112 1.7e-10 70.5 200 35.0
BraA02t08049Z Brassica rapa HOM05D008115 ORTHO05D010112 3.7e-10 69.3 193 29.0
THA.LOC104806705 Tarenaya hassleriana HOM05D008115 ORTHO05D010112 1.1e-09 67.8 124 41.9
BcaC04g21681 Brassica carinata HOM05D008115 ORTHO05D010112 1.4e-09 67.4 203 30.5
Manes.15G181340 Manihot esculenta HOM05D008115 ORTHO05D010112 1.4e-09 67.4 127 40.2
MELO3C030366.2 Cucumis melo HOM05D008115 ORTHO05D010112 1.2e-08 64.3 88 43.2
AT5G46795 Arabidopsis thaliana HOM05D008115 ORTHO05D010112 1.6e-08 63.9 194 28.4
A02p30340 Brassica napus HOM05D008115 ORTHO05D010112 1.6e-08 63.9 193 28.0
BcaC06g34346 Brassica carinata HOM05D008115 ORTHO05D010112 2.0e-08 63.5 195 30.3
C07p30110 Brassica napus HOM05D008115 ORTHO05D010112 2.0e-08 63.5 195 30.3
BolC7t43551H Brassica oleracea HOM05D008115 ORTHO05D010112 2.0e-08 63.5 195 30.3
AL8G11540 Arabidopsis lyrata HOM05D008115 ORTHO05D010112 3.5e-08 62.8 201 28.9
A06p45650 Brassica napus HOM05D008115 ORTHO05D010112 4.6e-08 62.4 93 38.7
FvH4_5g22030 Fragaria vesca HOM05D008115 ORTHO05D010112 6.0e-08 62.0 163 36.2
A09p22550 Brassica napus HOM05D008115 ORTHO05D010112 7.8e-08 61.6 202 30.2
C09p28900 Brassica napus HOM05D008115 ORTHO05D010112 7.8e-08 61.6 126 32.5
BcaB07g30820 Brassica carinata HOM05D008115 ORTHO05D010112 1.1e-06 57.8 202 29.2
Aqoxy3G02357 Aquilegia oxysepala HOM05D008115 ORTHO05D010112 1.5e-06 57.4 88 37.5
Aa31LG9G6090 Aethionema arabicum HOM05D008115 ORTHO05D010112 1.9e-06 57.0 128 29.7
Sc01g0007450 Simmondsia chinensis HOM05D008115 ORTHO05D010112 5.6e-06 55.5 73 42.5


User provided reference genes

Program Settings