Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 5.6e-178 627.5 315 100.0
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 1.4e-147 526.6 314 85.4
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 1.4e-123 446.8 312 76.0
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 1.2e-114 417.2 284 77.8
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 6.6e-110 401.4 316 68.4
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 1.6e-100 370.2 318 62.9
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 6.2e-100 368.2 324 60.8
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 6.2e-100 368.2 324 60.8
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 7.8e-95 351.3 312 60.9
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 1.5e-93 347.1 310 61.0
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 5.6e-85 318.5 313 56.2
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 9.5e-85 317.8 312 57.1
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 9.3e-72 274.6 298 53.7
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 5.4e-64 248.8 316 48.7
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 8.1e-60 235.0 318 46.5
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 1.1e-59 234.6 317 44.8
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 2.2e-57 226.9 316 44.0
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 8.4e-57 224.9 322 42.5
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 1.4e-56 224.2 310 48.1
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 4.3e-53 212.6 326 40.5
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 1.3e-52 211.1 329 40.4
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 6.2e-52 208.8 324 39.8
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 2.4e-51 206.8 319 41.7
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 5.3e-51 205.7 322 41.0
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 7.6e-50 201.8 318 39.6
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 1.0e-49 201.4 318 40.6
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 1.3e-49 201.1 311 42.1
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 2.9e-49 199.9 313 39.3
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 8.4e-49 198.4 255 45.1
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.1e-48 198.0 318 39.9
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 1.4e-48 197.6 317 39.7
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 5.5e-48 195.7 310 40.0
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 5.5e-48 195.7 316 39.9
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 2.7e-47 193.4 335 38.8
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 4.6e-47 192.6 319 41.1
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 5.1e-46 189.1 319 40.4
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 1.6e-44 184.1 325 39.1
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 8.2e-44 181.8 314 41.1
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 1.4e-43 181.0 318 38.7
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 1.8e-43 180.6 248 47.6
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 4.1e-43 179.5 322 40.7
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 5.3e-43 179.1 316 37.7
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 2.6e-42 176.8 341 37.2
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 4.5e-42 176.0 316 38.9
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 7.2e-40 168.7 324 39.2
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 1.6e-39 167.5 331 37.8
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 2.7e-39 166.8 318 39.3
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 4.6e-39 166.0 282 36.9
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 1.4e-38 164.5 271 39.1
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 1.8e-38 164.1 325 36.6
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 2.5e-37 160.2 288 36.1
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 3.3e-37 159.8 300 39.7
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 7.4e-37 158.7 326 36.5
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 6.3e-36 155.6 325 35.1
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 1.8e-35 154.1 316 36.4
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 5.3e-35 152.5 249 40.2
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 6.5e-33 145.6 310 36.8
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 1.9e-32 144.1 350 33.1
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.9e-32 144.1 309 35.6
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 1.6e-31 141.0 329 33.4
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 2.1e-31 140.6 315 34.3
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 6.1e-31 139.0 322 36.3
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 6.1e-31 139.0 307 34.2
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 6.1e-31 139.0 352 33.2
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 5.1e-30 136.0 317 34.1
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 6.7e-30 135.6 318 34.3
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 1.1e-29 134.8 309 35.6
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 2.2e-28 130.6 355 32.7
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 3.1e-27 126.7 181 46.4
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 7.0e-27 125.6 308 33.4
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 7.7e-26 122.1 349 30.4
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 7.7e-26 122.1 346 33.2
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 1.4e-24 117.9 248 38.7
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 2.5e-24 117.1 330 30.3
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 3.2e-24 116.7 338 32.2
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 1.2e-23 114.8 317 32.8
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 1.6e-23 114.4 358 31.0
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 1.0e-22 111.7 239 32.6
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 2.3e-22 110.5 310 33.2
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 6.7e-22 109.0 304 31.2
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 2.6e-21 107.1 312 31.1
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 2.8e-20 103.6 304 30.6
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 1.4e-19 101.3 312 31.1
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 5.3e-19 99.4 215 36.7
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 4.5e-18 96.3 298 31.9
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 5.9e-18 95.9 333 29.4
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 2.1e-15 87.4 297 28.6
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 6.1e-15 85.9 319 25.4
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 3.3e-13 80.1 151 35.1
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 9.7e-13 78.6 305 28.9
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 1.3e-12 78.2 302 28.8
Medtr5g029290 Medicago truncatula HOM05D007538 ORTHO05D009464 3.7e-12 76.6 90 47.8
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 1.6e-10 71.2 325 28.0
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 3.5e-10 70.1 81 45.7
THA.LOC104798612 Tarenaya hassleriana HOM05D007538 ORTHO05D009464 3.6e-07 60.1 188 31.4
Aqoxy1G00983 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 3.0e-06 57.0 200 28.5


User provided reference genes

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