Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 3.5e-270 934.5 485 100.0
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 4.8e-251 870.9 485 93.2
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 2.3e-237 825.5 487 89.9
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 3.7e-235 818.1 487 88.9
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 2.6e-201 705.7 493 77.3
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 3.2e-199 698.7 500 76.6
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 2.1e-198 696.0 493 76.3
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 6.3e-195 684.5 496 76.4
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 6.3e-195 684.5 496 76.4
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 4.5e-193 678.3 496 74.8
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 7.7e-193 677.6 494 75.1
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 5.6e-151 538.5 393 73.3
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 9.9e-140 501.1 495 60.2
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 1.0e-136 491.1 499 59.5
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 1.0e-136 491.1 496 58.7
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 6.6e-136 488.4 497 58.8
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 1.6e-134 483.8 492 58.7
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 2.4e-133 479.9 500 57.4
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.3e-131 474.2 496 58.7
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 2.9e-131 473.0 496 58.5
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 6.4e-131 471.9 495 58.6
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 1.1e-130 471.1 496 57.1
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.9e-130 470.3 498 57.0
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 1.9e-130 470.3 496 57.3
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 3.5e-129 466.1 498 56.6
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 7.9e-129 464.9 496 56.5
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 8.7e-128 461.5 498 56.6
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 3.1e-125 453.0 499 56.3
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 3.1e-125 453.0 502 56.4
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 1.0e-123 448.0 496 56.0
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 1.1e-122 444.5 498 54.0
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 5.5e-122 442.2 523 53.3
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 7.1e-122 441.8 558 50.7
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 7.1e-122 441.8 498 55.6
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.0e-120 438.0 558 50.5
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 8.7e-120 434.9 497 52.9
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 8.7e-120 434.9 559 50.4
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 3.3e-119 433.0 496 56.0
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 5.7e-119 432.2 491 55.0
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 2.1e-118 430.3 498 53.6
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 6.3e-118 428.7 497 53.5
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 1.4e-117 427.6 503 54.5
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 2.2e-115 420.2 507 52.7
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 6.5e-115 418.7 524 51.5
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 4.2e-114 416.0 469 53.9
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 1.6e-113 414.1 556 49.5
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 1.9e-111 407.1 574 47.2
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 2.5e-111 406.8 435 56.6
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 4.6e-105 386.0 501 50.7
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 6.7e-104 382.1 493 49.9
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 1.5e-103 380.9 496 49.6
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 4.3e-103 379.4 506 48.4
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 5.7e-103 379.0 500 47.6
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 7.4e-103 378.6 495 49.5
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 7.4e-103 378.6 500 47.6
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 2.8e-102 376.7 485 49.9
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 2.8e-102 376.7 509 48.5
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 1.4e-101 374.4 489 48.9
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 4.1e-101 372.9 434 55.5
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 9.1e-101 371.7 509 47.0
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 4.5e-100 369.4 498 48.8
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 7.9e-97 358.6 355 59.4
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 3.3e-95 353.2 504 46.0
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 8.2e-94 348.6 515 46.8
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 1.4e-93 347.8 503 48.3
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.1e-90 338.2 409 52.8
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 7.2e-90 335.5 444 49.5
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 1.1e-87 328.2 361 55.7
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 1.0e-83 315.1 499 44.5
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 3.8e-83 313.2 490 44.9
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 3.0e-80 303.5 368 52.4
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 8.8e-80 302.0 529 42.0
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 2.0e-79 300.8 465 46.9
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 4.4e-79 299.7 488 43.9
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 2.2e-78 297.4 497 42.1
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 7.0e-77 292.4 495 43.4
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 4.0e-72 276.6 412 48.5
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 1.2e-65 255.0 422 45.3
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 9.8e-63 245.4 324 50.0
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 2.3e-59 234.2 258 54.7
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 8.6e-35 152.5 322 38.8
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 1.1e-34 152.1 310 39.7
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 4.6e-28 130.2 280 39.3
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 6.2e-25 119.8 159 49.1
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 1.8e-24 118.2 79 81.0
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 5.3e-24 116.7 260 36.2
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 2.2e-22 111.3 76 80.3
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 1.4e-21 108.6 543 27.6
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 9.3e-21 105.9 71 81.7
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 3.5e-20 104.0 254 34.6
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 3.0e-19 100.9 184 41.8
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 9.6e-18 95.9 53 90.6
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 4.8e-17 93.6 160 39.4
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 6.2e-17 93.2 63 69.8
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 2.4e-16 91.3 62 66.1
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 1.7e-14 85.1 65 60.0
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 4.6e-12 77.0 44 84.1
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 3.9e-11 73.9 110 50.0
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 6.7e-11 73.2 61 68.9
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 6.7e-11 73.2 61 68.9
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 4.3e-10 70.5 40 85.0
FvH4_5g27461 Fragaria vesca HOM05D007238 ORTHO05D009206 3.8e-06 57.4 64 51.6


User provided reference genes

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