Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 9.7e-88 327.4 254 100.0
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 4.4e-72 275.4 253 90.5
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 7.5e-64 248.1 256 85.5
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 4.7e-58 228.8 254 82.3
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 1.2e-56 224.2 260 78.1
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 1.4e-49 200.7 256 76.2
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 2.9e-47 193.0 269 71.7
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 3.7e-39 166.0 264 67.4
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 3.7e-39 166.0 264 67.4
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 1.9e-38 163.7 255 69.8
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 2.3e-36 156.8 256 70.3
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 6.6e-36 155.2 256 68.8
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 1.5e-35 154.1 299 61.5
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 1.5e-35 154.1 243 69.5
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 1.9e-35 153.7 267 65.9
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 7.3e-35 151.8 275 64.4
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 3.6e-34 149.4 220 72.3
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 4.7e-34 149.1 255 66.3
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 8.1e-34 148.3 267 67.4
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 8.1e-34 148.3 243 68.7
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 1.1e-33 147.9 245 69.8
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 1.4e-33 147.5 243 68.3
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 1.2e-32 144.4 189 81.0
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 5.8e-32 142.1 256 65.2
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 7.6e-32 141.7 262 66.8
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 3.8e-31 139.4 255 65.9
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 6.4e-31 138.7 240 68.8
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 8.4e-31 138.3 255 52.2
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 8.4e-31 138.3 244 66.8
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 2.4e-30 136.7 260 64.2
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 1.6e-29 134.0 254 63.4
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 2.7e-29 133.3 256 64.1
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 2.7e-29 133.3 244 66.0
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 3.5e-29 132.9 253 63.2
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.7e-28 130.6 257 63.8
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 1.7e-28 130.6 254 64.6
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 5.1e-28 129.0 255 63.1
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 3.3e-27 126.3 246 64.2
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 5.6e-27 125.6 258 61.2
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 5.6e-27 125.6 258 62.4
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 5.6e-27 125.6 242 66.9
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 1.2e-26 124.4 254 61.8
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.6e-26 124.0 260 61.5
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 2.1e-26 123.6 244 62.3
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 2.1e-26 123.6 246 64.2
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 2.8e-26 123.2 256 60.5
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.8e-26 123.2 257 61.1
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 3.6e-26 122.9 267 60.7
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 6.2e-26 122.1 256 60.5
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 8.1e-26 121.7 256 60.2
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 8.1e-26 121.7 260 59.6
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 1.4e-25 120.9 250 64.8
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.4e-25 120.9 257 60.3
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 2.4e-25 120.2 243 64.6
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 2.4e-25 120.2 243 64.6
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 4.0e-25 119.4 243 65.8
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 4.0e-25 119.4 251 62.9
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 4.0e-25 119.4 254 61.4
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 4.0e-25 119.4 246 64.6
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 6.9e-25 118.6 257 60.3
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 8.9e-25 118.2 237 65.4
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 1.5e-24 117.5 245 64.1
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 1.5e-24 117.5 246 63.0
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 1.5e-24 117.5 246 63.0
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.5e-24 117.5 258 60.9
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 1.5e-24 117.5 259 61.4
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 2.0e-24 117.1 79 73.4
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 4.4e-24 115.9 241 64.3
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 4.4e-24 115.9 256 61.3
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 9.9e-24 114.8 254 58.7
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 1.3e-23 114.4 241 64.3
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 1.3e-23 114.4 258 58.9
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.2e-23 113.6 285 56.1
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 3.8e-23 112.8 263 47.9
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 4.9e-23 112.5 241 63.9
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 6.4e-23 112.1 207 51.2
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 8.4e-23 111.7 74 73.0
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 1.4e-22 110.9 68 77.9
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 1.4e-22 110.9 240 61.7
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 1.9e-22 110.5 71 76.1
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 3.2e-22 109.8 69 75.4
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 4.2e-22 109.4 219 66.2
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 4.2e-22 109.4 71 74.6
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 4.2e-22 109.4 257 59.9
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 5.4e-22 109.0 251 61.8
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 1.2e-21 107.8 262 59.2
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 2.1e-21 107.1 243 62.1
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 4.6e-21 105.9 243 60.9
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 6.0e-21 105.5 69 71.0
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 6.0e-21 105.5 294 55.4
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 7.8e-21 105.1 260 49.6
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 1.3e-20 104.4 245 61.6
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.7e-20 104.0 68 73.5
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 3.0e-20 103.2 271 58.7
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 1.3e-18 97.8 79 59.5
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 3.6e-18 96.3 246 58.1
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 6.2e-18 95.5 239 61.1
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 1.5e-16 90.9 205 65.4
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 9.9e-16 88.2 239 58.6
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 1.3e-15 87.8 272 56.6
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 1.9e-14 84.0 226 62.4
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 2.4e-14 83.6 246 53.7
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 2.4e-14 83.6 207 66.7
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 3.2e-14 83.2 68 61.8
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 4.2e-14 82.8 67 58.2
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 2.7e-13 80.1 68 60.3
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 2.3e-12 77.0 283 52.7
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.8e-10 70.1 205 61.5
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 8.1e-10 68.6 52 57.7
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 4.9e-07 59.3 44 61.4
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 9.3e-06 55.1 389 39.3


User provided reference genes

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