Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 1.3e-73 279.6 147 100.0
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 2.5e-72 275.4 147 98.0
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 2.4e-70 268.9 147 94.6
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 4.2e-67 258.1 139 95.0
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 8.7e-65 250.4 147 91.2
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 9.7e-64 246.9 147 87.1
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 4.8e-63 244.6 144 87.5
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 1.3e-60 236.5 149 84.6
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 1.3e-60 236.5 147 84.4
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 2.2e-60 235.7 147 83.7
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 1.4e-59 233.0 147 81.0
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 5.5e-59 231.1 146 86.3
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 7.2e-59 230.7 147 82.3
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 7.2e-59 230.7 147 82.3
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 9.4e-59 230.3 144 84.0
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 9.4e-59 230.3 144 84.0
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 9.4e-59 230.3 147 81.0
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 9.4e-59 230.3 144 84.0
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 2.1e-58 229.2 144 83.3
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 2.7e-58 228.8 147 82.3
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 3.6e-58 228.4 144 83.3
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 1.0e-57 226.9 147 81.6
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 1.4e-57 226.5 147 82.3
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 1.4e-57 226.5 147 82.3
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.8e-57 226.1 147 81.0
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 6.7e-57 224.2 147 80.3
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 6.7e-57 224.2 147 81.6
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 1.9e-56 222.6 147 81.6
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 2.5e-56 222.2 147 83.7
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 3.3e-56 221.9 147 79.6
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 4.3e-56 221.5 147 81.0
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 4.3e-56 221.5 147 81.0
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 4.3e-56 221.5 148 81.8
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 5.7e-56 221.1 147 79.6
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 5.7e-56 221.1 147 81.6
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 5.7e-56 221.1 147 83.0
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 7.4e-56 220.7 147 78.9
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 9.7e-56 220.3 147 80.3
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 1.7e-55 219.5 147 82.3
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 1.7e-55 219.5 147 80.3
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 1.7e-55 219.5 147 81.0
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 2.8e-55 218.8 147 80.3
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 3.7e-55 218.4 147 80.3
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 3.7e-55 218.4 144 79.2
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.7e-55 218.4 147 79.6
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.1e-54 216.9 148 79.7
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.1e-54 216.9 148 79.7
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 2.4e-54 215.7 147 78.9
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 3.1e-54 215.3 147 77.6
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.1e-54 215.3 147 77.6
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 3.1e-54 215.3 147 77.6
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 4.1e-54 214.9 147 77.6
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 5.3e-54 214.5 147 78.9
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 5.3e-54 214.5 147 78.9
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 5.3e-54 214.5 147 78.9
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 5.3e-54 214.5 147 75.5
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 5.3e-54 214.5 147 80.3
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 9.1e-54 213.8 147 76.9
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 9.1e-54 213.8 147 76.9
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 1.2e-53 213.4 147 76.2
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 1.5e-53 213.0 147 80.3
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 2.6e-53 212.2 144 77.8
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 3.4e-53 211.8 149 75.8
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 7.7e-53 210.7 147 78.2
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.0e-52 210.3 147 77.6
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 1.0e-52 210.3 147 78.9
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 1.0e-52 210.3 147 77.6
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 1.3e-52 209.9 150 75.3
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 1.3e-52 209.9 155 76.1
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 1.7e-52 209.5 147 78.2
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 5.0e-52 208.0 147 75.5
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 1.9e-51 206.1 147 75.5
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 2.5e-51 205.7 149 73.8
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 4.2e-51 204.9 149 73.8
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 5.5e-51 204.5 149 75.8
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 9.4e-51 203.8 149 75.2
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 2.7e-50 202.2 147 72.8
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 3.6e-50 201.8 148 77.7
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 4.7e-50 201.4 138 79.0
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 6.1e-50 201.1 149 74.5
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 1.0e-49 200.3 147 72.8
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 1.8e-49 199.5 147 71.4
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 2.3e-49 199.1 147 73.5
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 3.9e-49 198.4 149 71.8
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 5.7e-48 194.5 149 75.2
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 9.7e-48 193.7 150 70.7
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 9.7e-48 193.7 150 70.7
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 1.3e-47 193.4 152 69.7
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 3.7e-47 191.8 152 74.3
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 4.8e-47 191.4 151 70.9
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 6.3e-47 191.0 151 69.5
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 1.1e-46 190.3 153 69.9
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.1e-46 190.3 147 71.4
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.4e-46 189.9 147 71.4
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 4.1e-46 188.3 147 70.7
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 7.0e-46 187.6 154 68.2
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 9.1e-46 187.2 154 68.8
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 9.1e-46 187.2 158 67.7
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 1.5e-45 186.4 147 70.7
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 3.4e-45 185.3 115 82.6
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 5.9e-45 184.5 155 67.1
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 7.7e-45 184.1 147 68.0
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 1.0e-44 183.7 147 67.3
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 5.0e-44 181.4 155 65.8
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 3.6e-42 175.3 152 66.4
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 3.9e-41 171.8 139 67.6
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 3.9e-41 171.8 139 67.6
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 3.3e-40 168.7 109 81.7
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 4.4e-40 168.3 150 61.3
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 1.3e-39 166.8 100 84.0
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.2e-37 160.2 149 62.4
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 1.2e-37 160.2 161 55.9
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 1.2e-37 160.2 105 77.1
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 2.6e-37 159.1 113 80.5
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 6.5e-36 154.5 150 58.0
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 3.6e-34 148.7 147 60.5
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 4.7e-34 148.3 133 63.2
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.4e-33 146.7 140 62.9
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 5.2e-33 144.8 133 63.2
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 1.2e-29 133.7 153 52.9
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 1.6e-29 133.3 85 81.2
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 1.9e-27 126.3 152 50.0
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 3.2e-27 125.6 135 51.9
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 4.7e-26 121.7 91 71.4
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 4.7e-26 121.7 91 71.4
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 6.1e-26 121.3 85 71.8
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 6.3e-23 111.3 78 73.1
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 1.1e-22 110.5 145 51.0
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 4.1e-22 108.6 80 66.2
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 9.1e-22 107.5 166 46.4
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 8.6e-20 100.9 79 67.1
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.1e-18 96.3 71 66.2
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.1e-18 96.3 71 66.2
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 2.1e-18 96.3 79 55.7
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 1.0e-17 94.0 148 39.9
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.3e-17 92.8 69 68.1
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 2.3e-17 92.8 71 66.2
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 5.2e-17 91.7 69 63.8
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 3.4e-16 89.0 69 65.2
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 4.4e-16 88.6 69 63.8
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 2.4e-14 82.8 72 68.1
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 6.6e-12 74.7 72 51.4
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 1.9e-11 73.2 72 51.4
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 7.3e-11 71.2 122 42.6
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 1.4e-09 67.0 70 47.1
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 2.3e-09 66.2 83 45.8
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 8.3e-07 57.8 51 58.8
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 8.3e-07 57.8 72 41.7
HPP92_014777 Vanilla planifolia HOM05D005136 ORTHO05D006619 2.4e-06 56.2 72 43.1


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