Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G124900 Phaseolus vulgaris HOM05D005197 ORTHO05D006263 2.0e-124 449.1 234 100.0
VMungo1215G2329 Vigna mungo HOM05D005197 ORTHO05D006263 1.1e-104 383.6 235 88.5
Glyma.01G150900 Glycine max HOM05D005197 ORTHO05D006263 1.9e-58 229.9 260 59.2
VMungo0464G0602 Vigna mungo HOM05D005197 ORTHO05D006263 2.4e-56 223.0 166 75.3
Lj2g0023539 Lotus japonicus HOM05D005197 ORTHO05D006263 1.4e-48 197.2 261 54.8
Psat2g143520 Pisum sativum HOM05D005197 ORTHO05D006263 5.3e-48 195.3 269 50.9
Lalb_Chr16g0380581 Lupinus albus HOM05D005197 ORTHO05D006263 1.3e-46 190.7 258 51.6
arahy.Tifrunner.gnm1.ann1.11I9TD Arachis hypogaea HOM05D005197 ORTHO05D006263 2.5e-45 186.4 287 47.4
arahy.Tifrunner.gnm1.ann1.CK7EWS Arachis hypogaea HOM05D005197 ORTHO05D006263 2.5e-45 186.4 287 47.4
ClCG07G011270 Citrullus lanatus HOM05D005197 ORTHO05D006263 5.5e-45 185.3 272 47.4
Haze_08011 Corylus avellana HOM05D005197 ORTHO05D006263 4.6e-44 182.2 303 46.2
TPR.G17269 Trifolium pratense HOM05D005197 ORTHO05D006263 3.0e-43 179.5 261 48.7
Atru.chr6.2120 Acer truncatum HOM05D005197 ORTHO05D006263 1.1e-42 177.6 276 48.2
Cfa012647 Carpinus fangiana HOM05D005197 ORTHO05D006263 1.5e-42 177.2 303 45.2
RcHm_v2.0_Chr7g0214771 Rosa chinensis HOM05D005197 ORTHO05D006263 1.5e-42 177.2 285 47.4
Ca_25075_v3 Cicer arietinum L. HOM05D005197 ORTHO05D006263 4.4e-42 175.6 318 41.8
Manes.17G005300 Manihot esculenta HOM05D005197 ORTHO05D006263 4.4e-42 175.6 264 49.2
MELO3C016247.2 Cucumis melo HOM05D005197 ORTHO05D006263 7.4e-42 174.9 282 47.5
CsaV3_4G006970 Cucumis sativus L. HOM05D005197 ORTHO05D006263 1.3e-41 174.1 283 47.0
Sopen07g029250 Solanum pennellii HOM05D005197 ORTHO05D006263 1.3e-41 174.1 255 48.2
MD16G1288300 Malus domestica HOM05D005197 ORTHO05D006263 4.1e-40 169.1 287 46.7
CANSAT01G1003 Cannabis sativa HOM05D005197 ORTHO05D006263 9.1e-40 167.9 275 46.5
Medtr5g026390 Medicago truncatula HOM05D005197 ORTHO05D006263 9.1e-40 167.9 291 43.6
MSTRG.13922 Avicennia marina HOM05D005197 ORTHO05D006263 1.2e-39 167.5 261 46.4
TWI32G0688 Tripterygium wilfordii HOM05D005197 ORTHO05D006263 2.6e-39 166.4 301 45.2
Actinidia25714 Actinidia chinensis HOM05D005197 ORTHO05D006263 1.7e-38 163.7 284 43.7
Thecc.03G323400 Theobroma cacao HOM05D005197 ORTHO05D006263 2.2e-38 163.3 242 47.5
CiPaw.10G109500 Carya illinoinensis HOM05D005197 ORTHO05D006263 5.0e-38 162.2 313 42.8
FAN04G2949 Fragaria x ananassa HOM05D005197 ORTHO05D006263 8.5e-38 161.4 280 44.6
FAN08G2611 Fragaria x ananassa HOM05D005197 ORTHO05D006263 8.5e-38 161.4 283 43.8
FAN13G2818 Fragaria x ananassa HOM05D005197 ORTHO05D006263 1.4e-37 160.6 292 43.2
PGR042G3936 Punica granatum HOM05D005197 ORTHO05D006263 1.9e-37 160.2 296 43.2
TWI60G1368 Tripterygium wilfordii HOM05D005197 ORTHO05D006263 2.5e-37 159.8 306 41.8
CAN.G22.3 Capsicum annuum HOM05D005197 ORTHO05D006263 3.2e-37 159.5 244 44.3
SalBow8G0134 Salvia bowleyana HOM05D005197 ORTHO05D006263 5.5e-37 158.7 255 44.7
Oeu057151.1 Olea europaea HOM05D005197 ORTHO05D006263 9.4e-37 157.9 265 44.2
Nitab4.5_0004181g0010 Nicotiana tabacum HOM05D005197 ORTHO05D006263 1.6e-36 157.1 277 42.6
Potri.001G128600 Populus trichocarpa HOM05D005197 ORTHO05D006263 6.1e-36 155.2 315 39.7
Cc00_g01150 Coffea canephora HOM05D005197 ORTHO05D006263 1.0e-35 154.5 293 39.9
Eucgr.E01174 Eucalyptus grandis HOM05D005197 ORTHO05D006263 1.0e-35 154.5 256 43.4
Prupe.5G017000 Prunus persica HOM05D005197 ORTHO05D006263 1.0e-35 154.5 301 43.2
SGA_v2.0_scaffold121G33048 Striga asiatica HOM05D005197 ORTHO05D006263 3.0e-35 152.9 248 44.4
Sed0006364 Sechium edule HOM05D005197 ORTHO05D006263 8.8e-35 151.4 321 40.2
Peaxi162Scf00445g00001 Petunia axillaris HOM05D005197 ORTHO05D006263 1.1e-34 151.0 238 44.5
PGSC0003DMG400041236 Solanum tuberosum HOM05D005197 ORTHO05D006263 2.6e-34 149.8 230 45.2
Ciclev10002053m.g Citrus clementina HOM05D005197 ORTHO05D006263 4.4e-34 149.1 296 42.9
FAN18G1897 Fragaria x ananassa HOM05D005197 ORTHO05D006263 5.7e-34 148.7 285 41.8
FvH4_5g24380 Fragaria vesca HOM05D005197 ORTHO05D006263 7.4e-34 148.3 284 41.9
Rhsim05G0122600 Rhododendron simsii HOM05D005197 ORTHO05D006263 9.7e-34 147.9 253 45.8
QL12p002187 Quercus lobata HOM05D005197 ORTHO05D006263 1.7e-33 147.1 246 46.7
TAR629G2553 Trochodendron aralioides HOM05D005197 ORTHO05D006263 1.7e-33 147.1 271 39.5
vmacro19764 Vaccinium macrocarpon HOM05D005197 ORTHO05D006263 1.7e-33 147.1 279 40.9
Duzib084G1118 Durio zibethinus HOM05D005197 ORTHO05D006263 3.7e-33 146.0 240 45.0
COL.COLO4_16714 Corchorus olitorius HOM05D005197 ORTHO05D006263 3.1e-32 142.9 234 43.6
Migut.E01390 Erythranthe guttata HOM05D005197 ORTHO05D006263 3.1e-32 142.9 258 43.0
Nitab4.5_0000183g0040 Nicotiana tabacum HOM05D005197 ORTHO05D006263 3.1e-32 142.9 283 39.2
DCAR_030955 Daucus carota HOM05D005197 ORTHO05D006263 1.6e-31 140.6 248 39.9
Ah.12g056120 Amaranthus hybridus HOM05D005197 ORTHO05D006263 8.5e-30 134.8 271 39.9
Cpa.g.sc305.1 Carica papaya HOM05D005197 ORTHO05D006263 1.1e-29 134.4 289 40.5
Lsat_1_v5_gn_6_15401 Lactuca sativa HOM05D005197 ORTHO05D006263 1.9e-29 133.7 296 39.2
Nn3g19195 Nelumbo nucifera HOM05D005197 ORTHO05D006263 1.9e-29 133.7 250 38.8
Lj8A379T44 Lonicera japonica HOM05D005197 ORTHO05D006263 7.2e-29 131.7 273 40.7
TPR.G23178 Trifolium pratense HOM05D005197 ORTHO05D006263 9.4e-29 131.3 178 48.9
ECA233G2979 Erigeron canadensis HOM05D005197 ORTHO05D006263 2.3e-27 126.7 285 40.7
Nn1g09229 Nelumbo nucifera HOM05D005197 ORTHO05D006263 3.0e-27 126.3 272 40.1
ECA232G2780 Erigeron canadensis HOM05D005197 ORTHO05D006263 2.6e-26 123.2 269 39.8
Sabra01G0098900 Salix brachista HOM05D005197 ORTHO05D006263 3.3e-26 122.9 321 36.1
SalBow8G0427 Salvia bowleyana HOM05D005197 ORTHO05D006263 9.7e-26 121.3 238 39.1
Sc22g0002200 Simmondsia chinensis HOM05D005197 ORTHO05D006263 5.3e-24 115.5 239 38.1
unitig_748.g8157 Utricularia gibba HOM05D000246 ORTHO05D007958 3.5e-23 112.8 230 39.1
Glyma.09G215900 Glycine max HOM05D005197 ORTHO05D006263 2.5e-21 106.7 232 43.1
EL10Ac5g11882 Beta vulgaris HOM05D005197 ORTHO05D006263 3.2e-21 106.3 253 34.4
ATR0369G001 Amborella trichopoda HOM05D005197 ORTHO05D006263 4.7e-20 102.4 291 35.4
CARHR030980 Cardamine hirsuta HOM05D005197 ORTHO05D006263 1.2e-18 97.8 312 32.1
Aa31LG2G14490 Aethionema arabicum HOM05D005197 ORTHO05D006263 3.4e-18 96.3 315 33.3
PSO782G4627 Papaver somniferum HOM05D005197 ORTHO05D006263 7.5e-18 95.1 263 35.4
HanXRQChr17g0539691 Helianthus annuus HOM05D005197 ORTHO05D006263 9.8e-18 94.7 374 29.7
PSO063G5355 Papaver somniferum HOM05D005197 ORTHO05D006263 1.3e-17 94.4 259 35.1
AL1G49590 Arabidopsis lyrata HOM05D005197 ORTHO05D006263 4.8e-17 92.4 307 31.6
AT1G31460 Arabidopsis thaliana HOM05D005197 ORTHO05D006263 6.3e-17 92.0 305 32.5
BcaB07g32805 Brassica carinata HOM05D005197 ORTHO05D006263 2.4e-16 90.1 280 32.5
BcaC05g27174 Brassica carinata HOM05D005197 ORTHO05D006263 4.1e-16 89.4 292 32.5
BolC5t31804H Brassica oleracea HOM05D000153 ORTHO05D002648 4.1e-16 89.4 292 32.5
Sp1g27260 Schrenkiella parvula HOM05D005197 ORTHO05D006263 4.1e-16 89.4 314 30.3
BraA09t39008Z Brassica rapa HOM05D000153 ORTHO05D002648 5.4e-16 89.0 259 33.6
C05p30720 Brassica napus HOM05D000153 ORTHO05D002648 1.2e-15 87.8 292 32.2
Thhalv10008233m.g Eutrema salsugineum HOM05D005197 ORTHO05D006263 1.2e-15 87.8 322 31.1
Aqoxy3G01755 Aquilegia oxysepala HOM05D005197 ORTHO05D006263 2.7e-15 86.7 238 34.9
Carub.0001s2988 Capsella rubella HOM05D005197 ORTHO05D006263 2.7e-15 86.7 320 29.7
A09p34750 Brassica napus HOM05D000153 ORTHO05D002648 3.5e-15 86.3 279 31.5
TAR636G3359 Trochodendron aralioides HOM05D005197 ORTHO05D006263 7.7e-15 85.1 99 53.5
THA.LOC104814380 Tarenaya hassleriana HOM05D005197 ORTHO05D006263 1.0e-14 84.7 338 29.9
HPP92_022730 Vanilla planifolia HOM05D005197 ORTHO05D006263 1.5e-13 80.9 229 32.3
Aa31LG9G15880 Aethionema arabicum HOM05D005197 ORTHO05D006263 3.2e-13 79.7 236 35.6
Dinv09432 Davidia involucrata HOM05D005197 ORTHO05D002665 4.2e-13 79.3 161 41.6
Solyc07g055880.1 Solanum lycopersicum HOM05D005197 ORTHO05D006263 1.2e-12 77.8 62 67.7
CDE11G1044 Ceratophyllum demersum HOM05D005197 ORTHO05D006263 4.7e-12 75.9 244 32.0
AUR62027297 Chenopodium quinoa HOM05D005197 ORTHO05D006263 4.7e-12 75.9 203 34.0
MBI04_g30782_MAGBIO Magnolia biondii HOM05D005197 ORTHO05D006263 2.3e-11 73.6 62 64.5
Haze_08012 Corylus avellana HOM05D005197 ORTHO05D006263 2.0e-10 70.5 95 49.5
SalBow2G3639 Salvia bowleyana HOM05D002402 ORTHO05D002633 2.6e-10 70.1 77 44.2
Cfa012646 Carpinus fangiana HOM05D005197 ORTHO05D006263 4.4e-10 69.3 96 47.9
Haze_08014 Corylus avellana HOM05D005197 ORTHO05D006263 4.4e-10 69.3 95 48.4
CiPaw.11G075300 Carya illinoinensis HOM05D005197 ORTHO05D006263 7.5e-10 68.6 95 50.5
AUR62022385 Chenopodium quinoa HOM05D005197 ORTHO05D006263 1.3e-09 67.8 207 32.4
QL12p002196 Quercus lobata HOM05D005197 ORTHO05D006263 2.2e-09 67.0 99 46.5
Zm00001eb227690 Zea mays HOM05D005197 ORTHO05D006263 8.3e-09 65.1 265 29.4
Nn3g19194 Nelumbo nucifera HOM05D005197 ORTHO05D006263 1.4e-08 64.3 96 40.6
SalBow6G3245 Salvia bowleyana HOM05D005197 ORTHO05D006263 1.8e-08 63.9 79 43.0
SalBow6G4547 Salvia bowleyana HOM05D005197 ORTHO05D006263 2.4e-08 63.5 55 52.7
Thhalv10009724m.g Eutrema salsugineum HOM05D005197 ORTHO05D006263 3.1e-08 63.2 213 29.6
Glyma.09G216000 Glycine max HOM05D005197 ORTHO05D006263 3.1e-08 63.2 90 44.4
Psat2g143800 Pisum sativum HOM05D005197 ORTHO05D006263 3.1e-08 63.2 58 56.9
SalBow2G1093 Salvia bowleyana HOM05D005197 ORTHO05D006263 4.1e-08 62.8 49 53.1
SGA_v2.0_scaffold447G51756 Striga asiatica HOM05D005197 ORTHO05D006263 4.1e-08 62.8 176 33.5
Actinidia25715 Actinidia chinensis HOM05D005197 ORTHO05D006263 5.4e-08 62.4 73 50.7
Glyma.01G151000 Glycine max HOM05D005197 ORTHO05D006263 5.4e-08 62.4 92 44.6
Lalb_Chr05g0215321 Lupinus albus HOM05D005197 ORTHO05D006263 5.4e-08 62.4 70 54.3
Phvul.002G124800 Phaseolus vulgaris HOM05D005197 ORTHO05D006263 5.4e-08 62.4 57 57.9
BcaB07g32316 Brassica carinata HOM05D005197 ORTHO05D006263 7.0e-08 62.0 121 34.7
CARHR023710 Cardamine hirsuta HOM05D005197 ORTHO05D006263 7.0e-08 62.0 116 37.1
SEGI_24603 Sequoiadendron giganteum HOM05D005197 ORTHO05D006263 7.0e-08 62.0 248 33.9
SalBow7G0563 Salvia bowleyana HOM05D005197 ORTHO05D006263 1.2e-07 61.2 49 51.0
A09p41500 Brassica napus HOM05D005197 ORTHO05D006263 2.0e-07 60.5 59 47.5
BraA09t39642Z Brassica rapa HOM05D005197 ORTHO05D006263 2.0e-07 60.5 59 47.5
VMungo1215G1205 Vigna mungo HOM05D005197 ORTHO05D006263 2.0e-07 60.5 85 44.7
Hma1.2p1_0317F.1_g123280 Hydrangea macrophylla HOM05D005197 ORTHO05D006263 2.7e-07 60.1 46 65.2
TPR.G36193 Trifolium pratense HOM05D005197 ORTHO05D006263 2.7e-07 60.1 90 44.4
BcaC05g26236 Brassica carinata HOM05D005197 ORTHO05D006263 7.8e-07 58.5 59 45.8
BolC5t30946H Brassica oleracea HOM05D005197 ORTHO05D006263 7.8e-07 58.5 59 45.8
Carub.0001s2285 Capsella rubella HOM05D005197 ORTHO05D006263 1.7e-06 57.4 118 34.7


User provided reference genes

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