Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 1.1e-168 596.7 325 100.0
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 7.9e-135 484.2 310 86.1
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 1.2e-111 407.1 350 68.6
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 2.7e-111 406.0 368 67.1
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 7.5e-109 397.9 343 68.5
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 2.1e-103 379.8 351 63.8
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 4.7e-103 378.6 351 63.0
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 6.1e-103 378.3 353 63.5
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 2.3e-97 359.8 351 59.8
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 8.9e-94 347.8 346 58.4
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 3.2e-91 339.3 352 60.5
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 5.6e-80 302.0 352 52.3
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.1e-78 297.7 344 52.3
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.7e-74 283.1 350 49.4
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 1.0e-73 281.2 350 49.1
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 2.3e-73 280.0 338 50.6
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 3.9e-73 279.3 343 48.7
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 5.1e-73 278.9 350 48.6
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 6.6e-73 278.5 350 48.6
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 4.3e-72 275.8 354 49.2
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.2e-71 274.2 355 47.9
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 1.2e-71 274.2 355 49.3
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 1.6e-71 273.9 357 48.7
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 8.1e-71 271.6 351 47.6
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 8.1e-71 271.6 353 47.6
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 1.5e-69 267.3 356 46.3
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 2.6e-69 266.5 321 49.5
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 4.9e-68 262.3 330 51.2
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 4.9e-68 262.3 330 51.2
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.1e-67 261.2 357 46.5
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 5.4e-67 258.8 355 45.9
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.7e-65 253.8 318 47.5
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 3.0e-65 253.1 354 44.6
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 3.9e-65 252.7 318 47.2
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 5.1e-65 252.3 355 44.2
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 8.7e-65 251.5 339 46.3
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 1.1e-64 251.1 318 46.9
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 1.9e-64 250.4 351 45.3
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 3.3e-64 249.6 347 46.1
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 7.3e-64 248.4 312 51.0
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 3.6e-63 246.1 314 48.1
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 4.8e-63 245.7 343 46.1
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 1.4e-62 244.2 346 46.2
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 4.5e-61 239.2 352 41.5
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 4.2e-59 232.6 351 43.6
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 4.2e-59 232.6 344 40.7
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 4.2e-59 232.6 340 41.5
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 1.6e-58 230.7 294 48.6
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 1.8e-57 227.3 352 39.8
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 2.3e-57 226.9 351 41.3
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 1.9e-56 223.8 343 40.2
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 7.4e-56 221.9 303 42.2
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 2.8e-55 219.9 363 39.1
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 3.6e-55 219.5 365 38.9
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 1.8e-54 217.2 250 54.0
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.8e-54 217.2 250 54.0
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 1.8e-54 217.2 299 43.8
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 5.3e-54 215.7 267 48.3
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 6.9e-54 215.3 314 43.0
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 9.0e-54 214.9 324 40.7
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 9.0e-54 214.9 336 43.2
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 2.0e-53 213.8 311 43.4
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 1.7e-52 210.7 346 40.2
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 2.2e-52 210.3 310 44.2
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 3.8e-52 209.5 331 41.1
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 3.0e-49 199.9 291 41.9
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 1.9e-48 197.2 332 39.2
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 7.4e-48 195.3 346 40.2
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 3.7e-47 193.0 322 35.7
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 1.1e-46 191.4 272 46.0
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 1.1e-46 191.4 266 47.4
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 3.1e-46 189.9 295 41.0
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 1.5e-45 187.6 329 41.6
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 2.0e-45 187.2 319 42.3
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 8.4e-44 181.8 344 38.7
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 1.1e-43 181.4 268 43.3
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 9.3e-43 178.3 264 43.6
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 1.3e-41 174.5 267 42.3
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.5e-40 171.0 235 46.0
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 2.5e-40 170.2 344 36.3
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 1.2e-37 161.4 202 50.0
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 1.9e-35 154.1 320 34.1
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 2.1e-34 150.6 211 46.0
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 5.1e-33 146.0 327 35.2
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 1.1e-32 144.8 141 57.4
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.1e-32 144.8 327 35.2
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 2.5e-32 143.7 214 43.9
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 7.4e-32 142.1 281 40.9
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 2.6e-29 133.7 328 32.9
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 7.7e-29 132.1 327 33.0
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 5.0e-28 129.4 332 31.6
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 6.5e-28 129.0 328 32.3
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 6.5e-28 129.0 328 32.3
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 6.5e-28 129.0 326 33.4
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 1.4e-27 127.9 328 32.0
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 1.9e-27 127.5 331 30.8
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 1.9e-27 127.5 139 50.4
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 2.5e-27 127.1 333 32.1
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 3.2e-27 126.7 334 31.1
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 2.7e-26 123.6 326 32.8
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 2.0e-24 117.5 328 29.9
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 9.1e-22 108.6 257 31.1
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 1.5e-21 107.8 276 29.7
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.1e-19 101.7 268 30.2
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 1.1e-19 101.7 261 31.4
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 2.1e-18 97.4 244 31.6
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 4.7e-18 96.3 269 30.1
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 6.1e-18 95.9 285 30.5
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 2.0e-16 90.9 310 30.0
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 4.4e-16 89.7 267 30.7
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 5.9e-13 79.3 218 31.7
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 6.5e-12 75.9 108 38.9
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 6.5e-12 75.9 108 38.9
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 2.2e-07 60.8 80 41.2
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 1.8e-06 57.8 75 46.7


User provided reference genes

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