Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 4.7e-103 377.9 192 100.0
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 1.6e-95 352.8 192 93.2
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 3.8e-92 341.7 192 89.1
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 6.2e-87 324.3 193 85.0
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 1.1e-86 323.6 193 83.9
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 9.9e-85 317.0 193 82.4
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 6.4e-84 314.3 193 82.9
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 3.7e-79 298.5 193 76.7
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 1.4e-78 296.6 193 79.3
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 5.8e-77 291.2 193 74.1
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 1.7e-76 289.7 192 76.0
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 3.8e-76 288.5 177 84.2
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 4.9e-76 288.1 191 77.0
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 8.4e-76 287.3 193 75.1
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 1.1e-75 287.0 193 73.6
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 1.4e-75 286.6 193 75.1
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 1.9e-75 286.2 192 75.0
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 9.3e-75 283.9 190 72.6
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 1.6e-74 283.1 192 74.0
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 1.6e-74 283.1 192 74.5
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 2.1e-74 282.7 189 75.1
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 3.5e-74 282.0 193 74.1
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 6.0e-74 281.2 184 76.1
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 1.0e-73 280.4 213 68.1
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 1.3e-73 280.0 193 72.5
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 1.3e-73 280.0 193 74.1
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 5.1e-73 278.1 192 71.4
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 1.1e-72 276.9 188 73.9
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 1.9e-72 276.2 193 72.5
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 2.5e-72 275.8 189 73.0
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 4.3e-72 275.0 193 71.5
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 4.3e-72 275.0 189 72.0
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 2.8e-71 272.3 190 73.7
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 2.8e-71 272.3 190 74.7
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 2.8e-71 272.3 193 73.1
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 2.8e-71 272.3 191 71.7
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 4.8e-71 271.6 191 72.8
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 6.2e-71 271.2 185 75.1
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 6.2e-71 271.2 190 71.6
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 8.2e-71 270.8 194 70.6
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 1.1e-70 270.4 191 68.6
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 1.4e-70 270.0 191 68.1
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 3.1e-70 268.9 190 71.1
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 5.3e-70 268.1 193 72.0
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 6.9e-70 267.7 189 70.9
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 1.2e-69 266.9 181 70.2
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 2.0e-69 266.2 235 61.7
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 4.5e-69 265.0 191 66.5
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 1.0e-68 263.8 191 69.6
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 2.2e-68 262.7 166 80.7
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 2.2e-68 262.7 166 80.7
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 2.9e-68 262.3 181 69.1
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 6.5e-68 261.2 193 68.9
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 1.1e-67 260.4 190 72.1
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 1.4e-67 260.0 184 72.3
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 7.1e-67 257.7 191 65.4
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 7.1e-67 257.7 188 68.1
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 9.3e-67 257.3 193 66.8
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 2.7e-66 255.8 189 69.3
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 3.5e-66 255.4 186 70.4
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 4.6e-66 255.0 193 66.3
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 2.3e-65 252.7 153 83.7
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 3.0e-65 252.3 193 63.7
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 5.1e-65 251.5 189 65.1
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 9.7e-64 247.3 191 62.8
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 4.8e-63 245.0 177 69.5
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 8.2e-63 244.2 189 60.8
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 2.4e-62 242.7 153 77.8
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 2.4e-62 242.7 167 72.5
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 2.6e-61 239.2 170 72.4
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 2.2e-60 236.1 162 74.7
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.9e-60 235.7 229 58.5
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 3.8e-60 235.3 189 63.5
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 6.5e-60 234.6 175 68.0
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 2.1e-58 229.6 153 69.9
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 1.0e-57 227.3 212 59.9
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 1.0e-57 227.3 169 66.3
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 1.3e-52 210.3 138 76.8
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 2.2e-52 209.5 138 76.1
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.8e-46 189.9 152 67.8
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 7.0e-46 188.0 207 51.7
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 1.5e-45 186.8 119 76.5
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 4.5e-45 185.3 119 77.3
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.6e-42 176.8 109 81.7
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 3.6e-42 175.6 208 53.4
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 1.0e-41 174.1 118 72.9
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 5.0e-36 155.2 140 63.6
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 1.2e-32 144.1 132 59.8
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 3.7e-31 139.0 103 67.0
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 4.8e-31 138.7 90 76.7
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 1.4e-30 137.1 82 80.5
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 5.3e-30 135.2 187 45.5
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 7.7e-29 131.3 133 54.9
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 3.8e-28 129.0 70 88.6
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 3.4e-24 115.9 76 77.6
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 2.8e-23 112.8 182 35.2
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 8.3e-23 111.3 182 35.7
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 2.0e-21 106.7 190 37.4
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 2.7e-21 106.3 182 34.1
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 2.3e-20 103.2 69 71.0
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 1.2e-18 97.4 60 78.3
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 1.2e-18 97.4 135 37.8
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 2.8e-18 96.3 173 38.7
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 6.1e-18 95.1 127 44.9
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 3.4e-16 89.4 60 73.3
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 2.2e-15 86.7 73 64.4
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 1.0e-12 77.8 74 56.8
arahy.Tifrunner.gnm1.ann1.BGC890 Arachis hypogaea HOM05D006972 ORTHO05D008519 1.3e-07 60.8 62 51.6
MD02G1111700 Malus domestica HOM05D006972 ORTHO05D008519 4.9e-07 58.9 52 55.8
arahy.Tifrunner.gnm1.ann1.A1T4XS Arachis hypogaea HOM05D006972 ORTHO05D008519 3.2e-06 56.2 59 50.8


User provided reference genes

Program Settings