Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G114800 Phaseolus vulgaris HOM05D001343 ORTHO05D007223 0.0e+00 1216.1 793 100.0
Glyma.01G159900 Glycine max HOM05D001343 ORTHO05D007223 3.4e-272 941.8 794 80.5
VMungo1215G1031 Vigna mungo HOM05D001343 ORTHO05D007223 5.1e-252 874.8 793 80.3
Lalb_Chr05g0211921 Lupinus albus HOM05D001343 ORTHO05D007223 2.1e-245 852.8 791 69.0
Glyma.11G084200 Glycine max HOM05D001343 ORTHO05D007223 9.6e-243 844.0 793 77.0
TPR.G25095 Trifolium pratense HOM05D001343 ORTHO05D007223 5.3e-225 785.0 796 67.7
Lj2g0004784 Lotus japonicus HOM05D001343 ORTHO05D007223 6.5e-223 778.1 798 69.4
Medtr5g023770 Medicago truncatula HOM05D001343 ORTHO05D007223 6.3e-218 761.5 777 72.8
arahy.Tifrunner.gnm1.ann1.AU9Y8G Arachis hypogaea HOM05D001343 ORTHO05D007223 1.4e-214 750.4 795 68.7
arahy.Tifrunner.gnm1.ann1.SLQH96 Arachis hypogaea HOM05D001343 ORTHO05D007223 1.4e-214 750.4 795 68.7
CiPaw.07G004100 Carya illinoinensis HOM05D001343 ORTHO05D007223 7.2e-214 748.0 792 67.0
Dinv08526 Davidia involucrata HOM05D001343 ORTHO05D007223 1.1e-209 734.2 793 60.5
Ca_24963_v3 Cicer arietinum L. HOM05D001343 ORTHO05D007223 1.1e-201 707.6 817 67.6
QL06p052741 Quercus lobata HOM05D001343 ORTHO05D007223 1.1e-201 707.6 826 60.2
Actinidia17384 Actinidia chinensis HOM05D001343 ORTHO05D007223 2.2e-199 699.9 798 58.1
Hma1.2p1_0300F.1_g118160 Hydrangea macrophylla HOM05D001343 ORTHO05D007223 3.6e-197 692.6 765 62.5
Haze_03675 Corylus avellana HOM05D001343 ORTHO05D007223 1.0e-196 691.0 799 57.3
Prupe.7G179600 Prunus persica HOM05D001343 ORTHO05D007223 5.2e-196 688.7 792 60.2
Duzib187G0329 Durio zibethinus HOM05D001343 ORTHO05D007223 3.7e-194 682.6 794 58.8
FAN23G1852 Fragaria x ananassa HOM05D001343 ORTHO05D007223 4.8e-194 682.2 787 63.9
QL06p053829 Quercus lobata HOM05D001343 ORTHO05D007223 1.5e-190 670.6 792 64.3
MD15G1233300 Malus domestica HOM05D001343 ORTHO05D007223 1.6e-189 667.2 792 56.4
Duzib147G0638 Durio zibethinus HOM05D001343 ORTHO05D007223 1.8e-188 663.7 791 58.0
MD02G1119300 Malus domestica HOM05D001343 ORTHO05D007223 3.0e-188 662.9 770 63.1
Atru.chr3.956 Acer truncatum HOM05D001343 ORTHO05D007223 1.4e-185 654.1 772 57.3
GSVIVG01003839001 Vitis vinifera HOM05D001343 ORTHO05D007223 7.8e-184 648.3 738 58.7
FAN28G2189 Fragaria x ananassa HOM05D001343 ORTHO05D007223 7.3e-182 641.7 787 61.5
FvH4_1g10521 Fragaria vesca HOM05D001343 ORTHO05D007223 1.9e-177 627.1 787 58.3
FAN19G1061 Fragaria x ananassa HOM05D001343 ORTHO05D007223 1.9e-177 627.1 787 58.6
CANSAT25G1453 Cannabis sativa HOM05D001343 ORTHO05D007223 3.2e-177 626.3 744 58.1
Ciclev10024922m.g Citrus clementina HOM05D001343 ORTHO05D007223 7.0e-177 625.2 798 58.9
CANSAT25G0854 Cannabis sativa HOM05D001343 ORTHO05D007223 1.6e-176 624.0 744 57.9
Thecc.01G007100 Theobroma cacao HOM05D001343 ORTHO05D007223 5.6e-174 615.5 791 58.2
CAN.G890.76 Capsicum annuum HOM05D001343 ORTHO05D007223 1.6e-173 614.0 791 57.5
TWI09G1271 Tripterygium wilfordii HOM05D001343 ORTHO05D007223 2.8e-173 613.2 795 55.2
Sed0023593 Sechium edule HOM05D001343 ORTHO05D007223 5.8e-171 605.5 795 54.1
Gohir.A10G099100 Gossypium hirsutum HOM05D001343 ORTHO05D007223 3.7e-170 602.8 792 55.7
PGR083G0487 Punica granatum HOM05D001343 ORTHO05D007223 4.9e-170 602.4 751 61.5
Sabra05G0082500 Salix brachista HOM05D001343 ORTHO05D007223 1.4e-169 600.9 794 53.9
CsaV3_3G000380 Cucumis sativus L. HOM05D001343 ORTHO05D007223 1.9e-169 600.5 766 55.4
SGA_v2.0_scaffold12G05990 Striga asiatica HOM05D001343 ORTHO05D007223 2.4e-169 600.1 793 53.6
Nitab4.5_0000702g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 6.0e-168 595.5 792 51.5
TAR381G1734 Trochodendron aralioides HOM05D001343 ORTHO05D007223 1.0e-167 594.7 793 51.3
Potri.005G099800 Populus trichocarpa HOM05D001343 ORTHO05D007223 2.3e-167 593.6 794 53.4
Gohir.D10G089000 Gossypium hirsutum HOM05D001343 ORTHO05D007223 3.3e-166 589.7 792 56.8
PSO210G1702 Papaver somniferum HOM05D001343 ORTHO05D007223 4.3e-166 589.3 773 54.3
Gorai.011G097900 Gossypium raimondii HOM05D001343 ORTHO05D007223 5.6e-166 589.0 792 56.7
MSTRG.15594 Avicennia marina HOM05D001343 ORTHO05D007223 9.5e-166 588.2 797 58.2
Aqoxy5G01035 Aquilegia oxysepala HOM05D001343 ORTHO05D007223 1.6e-165 587.4 767 51.6
Carub.0008s2848 Capsella rubella HOM05D001343 ORTHO05D007223 1.2e-163 581.3 768 56.4
ClCG10G000340 Citrullus lanatus HOM05D001343 ORTHO05D007223 1.1e-161 574.7 800 53.1
Sopen02g027640 Solanum pennellii HOM05D001343 ORTHO05D007223 4.1e-161 572.8 795 57.2
Dinv40173 Davidia involucrata HOM05D001343 ORTHO05D007223 5.4e-161 572.4 605 60.5
Solyc02g082840.3 Solanum lycopersicum HOM05D001343 ORTHO05D007223 1.2e-160 571.2 795 57.2
SalBow5G5069 Salvia bowleyana HOM05D001343 ORTHO05D007223 1.6e-160 570.9 858 53.4
Peaxi162Scf01446g00025 Petunia axillaris HOM05D001343 ORTHO05D007223 1.7e-159 567.4 800 49.8
THA.LOC104826465 Tarenaya hassleriana HOM05D001343 ORTHO05D007223 3.9e-159 566.2 792 52.7
Hund03615 Selenicereus undatus HOM05D001343 ORTHO05D007223 1.6e-157 560.8 792 50.0
Nn5g30956 Nelumbo nucifera HOM05D001343 ORTHO05D007223 1.4e-156 557.8 757 56.9
vmacro20524 Vaccinium macrocarpon HOM05D001343 ORTHO05D007223 4.0e-156 556.2 756 53.8
A09p10220 Brassica napus HOM05D001343 ORTHO05D002008 5.8e-155 552.4 739 58.1
BcaB04g20130 Brassica carinata HOM05D001343 ORTHO05D002008 4.9e-154 549.3 729 53.8
Manes.02G112700 Manihot esculenta HOM05D001343 ORTHO05D007223 8.4e-154 548.5 788 54.9
BraA09t36667Z Brassica rapa HOM05D001343 ORTHO05D002008 1.9e-153 547.4 749 57.0
BolC9t54101H Brassica oleracea HOM05D001343 ORTHO05D002008 5.4e-153 545.8 752 57.3
PSO170G3735 Papaver somniferum HOM05D001343 ORTHO05D007223 1.2e-152 544.7 760 52.6
BcaC04g23105 Brassica carinata HOM05D001343 ORTHO05D002008 1.6e-152 544.3 745 57.6
C09p12110 Brassica napus HOM05D001343 ORTHO05D002008 1.6e-152 544.3 745 57.6
COL.COLO4_22537 Corchorus olitorius HOM05D001343 ORTHO05D007223 3.5e-152 543.1 792 51.6
Eucgr.J02528 Eucalyptus grandis HOM05D001343 ORTHO05D007223 3.9e-151 539.7 798 57.3
AL8G45590 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 9.6e-150 535.0 805 53.5
AT5G66030 Arabidopsis thaliana HOM05D001343 ORTHO05D007223 2.8e-149 533.5 794 51.1
Atru.chr3.968 Acer truncatum HOM05D001343 ORTHO05D007223 1.8e-148 530.8 772 50.8
HanXRQChr14g0442391 Helianthus annuus HOM05D001343 ORTHO05D007223 1.8e-148 530.8 797 49.1
Sp2g30660 Schrenkiella parvula HOM05D001343 ORTHO05D007223 5.3e-148 529.3 761 56.4
Cpa.g.sc55.186 Carica papaya HOM05D001343 ORTHO05D007223 6.9e-148 528.9 793 49.4
Lsat_1_v5_gn_2_74420 Lactuca sativa HOM05D001343 ORTHO05D007223 1.2e-147 528.1 794 55.4
Actinidia22910 Actinidia chinensis HOM05D001343 ORTHO05D007223 2.0e-147 527.3 798 50.5
Thhalv10003686m.g Eutrema salsugineum HOM05D001343 ORTHO05D007223 2.2e-146 523.9 754 51.2
CSS0043948 Camellia sinensis var. sinensis HOM05D001343 ORTHO05D007223 3.8e-146 523.1 793 48.5
ECA238G2213 Erigeron canadensis HOM05D001343 ORTHO05D007223 6.4e-146 522.3 751 47.8
EL10Ac6g15468 Beta vulgaris HOM05D001343 ORTHO05D007223 9.6e-142 508.4 772 48.6
ATR0661G538 Amborella trichopoda HOM05D001343 ORTHO05D007223 1.3e-141 508.1 774 50.0
Zm00001eb104860 Zea mays HOM05D001343 ORTHO05D007223 9.9e-139 498.4 748 51.2
AUR62003379 Chenopodium quinoa HOM05D001343 ORTHO05D007223 4.9e-138 496.1 794 51.4
MELO3C013733.2 Cucumis melo HOM05D001343 ORTHO05D007223 5.4e-137 492.7 773 48.9
Cc07_g11650 Coffea canephora HOM05D001343 ORTHO05D007223 3.4e-131 473.4 787 52.7
Sc16g0001690 Simmondsia chinensis HOM05D001343 ORTHO05D007223 2.7e-128 463.8 771 49.7
Manes.01G153700 Manihot esculenta HOM05D001343 ORTHO05D007223 6.0e-128 462.6 591 62.1
AUR62029449 Chenopodium quinoa HOM05D001343 ORTHO05D007223 1.9e-126 457.6 794 47.5
Ah.03g148390 Amaranthus hybridus HOM05D001343 ORTHO05D007223 2.5e-126 457.2 760 47.6
Nitab4.5_0002967g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 7.6e-123 445.7 797 44.0
HPP92_003502 Vanilla planifolia HOM05D001343 ORTHO05D007223 2.2e-122 444.1 779 50.7
Lj4A232G45 Lonicera japonica HOM05D001343 ORTHO05D007223 6.1e-120 436.0 766 52.2
Migut.L00734 Erythranthe guttata HOM05D001343 ORTHO05D007223 3.7e-117 426.8 795 44.5
Os07g0472500 Oryza sativa ssp. japonica HOM05D001343 ORTHO05D007223 2.1e-112 411.0 744 43.8
Psat2g150520 Pisum sativum HOM05D001343 ORTHO05D007223 6.9e-108 396.0 512 67.6
CARHR281730 Cardamine hirsuta HOM05D001343 ORTHO05D007223 2.1e-104 384.4 419 62.5
unitig_88.g27773 Utricularia gibba HOM05D001343 ORTHO05D007223 1.5e-102 378.3 794 40.4
Mapoly0179s0009 Marchantia polymorpha HOM05D001343 ORTHO05D007223 2.6e-102 377.5 757 36.9
DCAR_011583 Daucus carota HOM05D001343 ORTHO05D007223 1.3e-93 348.6 760 43.6
SEGI_12448 Sequoiadendron giganteum HOM05D001343 ORTHO05D007223 1.0e-87 328.9 772 39.1
AagrBONN_evm.TU.Sc2ySwM_344.163 Anthoceros agrestis HOM05D001343 ORTHO05D007223 3.7e-85 320.5 669 36.5
RcHm_v2.0_Chr2g0097461 Rosa chinensis HOM05D001343 ORTHO05D007223 6.8e-79 299.7 573 53.1
Psat2g150480 Pisum sativum HOM05D001343 ORTHO05D007223 4.9e-77 293.5 193 83.4
RcHm_v2.0_Chr2g0097581 Rosa chinensis HOM05D001343 ORTHO05D007223 9.2e-76 289.3 573 52.9
Pp3c20_18210 Physcomitrium patens HOM05D001343 ORTHO05D007223 7.3e-73 279.6 780 31.8
RcHm_v2.0_Chr2g0097451 Rosa chinensis HOM05D001343 ORTHO05D007223 6.1e-72 276.6 190 81.1
CDE06G1375 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 3.4e-70 270.8 266 58.6
CDE07G1064 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 7.5e-70 269.6 251 61.8
Pp3c23_9770 Physcomitrium patens HOM05D001343 ORTHO05D007223 3.7e-61 240.7 769 34.9
Actinidia26548 Actinidia chinensis HOM05D001343 ORTHO05D007223 1.6e-51 208.8 182 65.4
Migut.L00811 Erythranthe guttata HOM05D001343 ORTHO05D007223 5.6e-49 200.3 132 82.6
QL06p053793 Quercus lobata HOM05D001343 ORTHO05D007223 2.9e-45 188.0 137 81.8
Rhsim10G0198000 Rhododendron simsii HOM05D001343 ORTHO05D007223 3.0e-42 177.9 821 28.7
RcHm_v2.0_Chr2g0097571 Rosa chinensis HOM05D001343 ORTHO05D007223 3.0e-42 177.9 123 79.7
arahy.Tifrunner.gnm1.ann1.9PSP05 Arachis hypogaea HOM05D001343 ORTHO05D007223 3.9e-42 177.6 166 66.9
arahy.Tifrunner.gnm1.ann1.ISY8LN Arachis hypogaea HOM05D001343 ORTHO05D007223 1.6e-40 172.2 180 60.0
CBR_g34809 Chara braunii HOM05D000019 ORTHO05D000002 1.0e-34 152.9 340 37.4
Migut.L00927 Erythranthe guttata HOM05D001343 ORTHO05D007223 3.0e-34 151.4 377 44.0
CDE07G1287 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 3.3e-33 147.9 174 50.6
arahy.Tifrunner.gnm1.ann1.6P6C0I Arachis hypogaea HOM05D001343 ORTHO05D007223 3.4e-22 111.3 95 74.7
Oeu032010.1 Olea europaea HOM05D001343 ORTHO05D007223 2.9e-21 108.2 170 51.2
arahy.Tifrunner.gnm1.ann1.QS1PDB Arachis hypogaea HOM05D001343 ORTHO05D007223 4.2e-20 104.4 84 66.7
Cpa.g.sc1414.4 Carica papaya HOM05D001343 ORTHO05D007223 3.5e-19 101.3 297 39.1
arahy.Tifrunner.gnm1.ann1.T78FCF Arachis hypogaea HOM05D001343 ORTHO05D007223 1.0e-18 99.8 79 74.7
RcHm_v2.0_Chr6g0253501 Rosa chinensis HOM05D001343 ORTHO05D007223 8.7e-18 96.7 227 42.3
HPP92_003508 Vanilla planifolia HOM05D001343 ORTHO05D007223 1.5e-17 95.9 56 92.9
CDE06G1033 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 3.7e-16 91.3 73 64.4
Aa31LG1G14520 Aethionema arabicum HOM05D001343 ORTHO05D007223 8.1e-16 90.1 268 38.1
QL06p052753 Quercus lobata HOM05D003687 ORTHO05D007223 3.4e-14 84.7 55 80.0
AL472U10010 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 5.5e-12 77.4 156 35.9
Actinidia26547 Actinidia chinensis HOM05D001343 ORTHO05D007223 1.2e-11 76.3 148 39.2
RcHm_v2.0_Chr2g0097561 Rosa chinensis HOM05D001343 ORTHO05D007223 6.7e-10 70.5 47 80.9
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 2.5e-09 68.6 48 72.9
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 2.5e-09 68.6 48 72.9
Glyma.18G186501 Glycine max HOM05D001343 ORTHO05D007223 3.3e-09 68.2 70 57.1
arahy.Tifrunner.gnm1.ann1.55UCKQ Arachis hypogaea HOM05D050568 ORTHO05D007223 1.3e-08 66.2 73 50.7
CDE06G1191 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 1.3e-08 66.2 103 40.8
QL06p052757 Quercus lobata HOM05D003687 ORTHO05D004571 8.2e-08 63.5 66 56.1
QL06p052765 Quercus lobata HOM05D000009 ORTHO05D000008 1.8e-07 62.4 49 63.3
Lsat_1_v5_gn_4_84780 Lactuca sativa HOM05D003172 ORTHO05D007223 3.1e-07 61.6 52 71.2
Cre09.g398808 Chlamydomonas reinhardtii HOM05D001343 ORTHO05D007223 1.2e-06 59.7 95 38.9


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