Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G106400 Phaseolus vulgaris HOM05D008490 ORTHO05D010725 1.2e-42 176.0 82 100.0
arahy.Tifrunner.gnm1.ann1.BZJ16Q Arachis hypogaea HOM05D008490 ORTHO05D010725 2.8e-20 101.7 49 85.7
arahy.Tifrunner.gnm1.ann1.GRFW67 Arachis hypogaea HOM05D008490 ORTHO05D010725 2.8e-20 101.7 49 85.7
arahy.Tifrunner.gnm1.ann1.PAX1AS Arachis hypogaea HOM05D008490 ORTHO05D010725 2.8e-20 101.7 49 85.7
Lj5g0013341 Lotus japonicus HOM05D008490 ORTHO05D010725 2.8e-20 101.7 49 85.7
LjContig00439g0024223 Lotus japonicus HOM05D008490 ORTHO05D010725 2.8e-20 101.7 49 85.7
MBI05_g05344_MAGBIO Magnolia biondii HOM05D008490 ORTHO05D010725 2.8e-20 101.7 49 85.7
Sed0016837 Sechium edule HOM05D008490 ORTHO05D010725 2.8e-20 101.7 49 85.7
TPR.G7850 Trifolium pratense HOM05D008490 ORTHO05D010725 2.8e-20 101.7 49 85.7
VMungo0329G0002 Vigna mungo HOM05D008490 ORTHO05D010725 2.8e-20 101.7 49 85.7
Psat4g185480 Pisum sativum HOM05D008490 ORTHO05D010725 8.1e-20 100.1 49 83.7
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 2.4e-19 98.6 49 83.7
Lsat_1_v5_gn_5_16680 Lactuca sativa HOM05D008490 ORTHO05D010725 2.4e-19 98.6 49 83.7
MBI16_g26183_MAGBIO Magnolia biondii HOM05D001356 ORTHO05D008843 2.4e-19 98.6 49 83.7
Peaxi162Scf00477g00823 Petunia axillaris HOM05D008490 ORTHO05D010725 2.4e-19 98.6 49 83.7
ECA039G0024 Erigeron canadensis HOM05D008490 ORTHO05D010725 3.1e-19 98.2 48 85.4
Lj5g0002635 Lotus japonicus HOM05D008490 ORTHO05D010725 3.1e-19 98.2 49 83.7
CSS0048923 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 6.9e-19 97.1 46 87.0
Sed0023681 Sechium edule HOM05D008490 ORTHO05D010725 6.9e-19 97.1 46 87.0
Nitab4.5_0006476g0030 Nicotiana tabacum HOM05D008490 ORTHO05D010725 2.0e-18 95.5 49 81.6
Sopen00g006810 Solanum pennellii HOM05D008490 ORTHO05D010725 4.5e-18 94.4 49 83.7
PGSC0003DMG400004057 Solanum tuberosum HOM05D008490 ORTHO05D010725 1.3e-17 92.8 46 82.6
Nn2g14502 Nelumbo nucifera HOM05D008490 ORTHO05D010725 1.4e-16 89.4 43 86.0
Nitab4.5_0005831g0100 Nicotiana tabacum HOM05D008490 ORTHO05D010725 4.2e-16 87.8 46 80.4
Nitab4.5_0000172g1820 Nicotiana tabacum HOM05D008490 ORTHO05D010725 1.6e-15 85.9 51 76.5
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 4.6e-15 84.3 40 82.5
Sc14g0003240 Simmondsia chinensis HOM05D008490 ORTHO05D010725 4.6e-15 84.3 38 86.8
unitig_87.g27953 Utricularia gibba HOM05D008490 ORTHO05D010725 4.6e-15 84.3 38 86.8
Actinidia34838 Actinidia chinensis HOM05D008490 ORTHO05D010725 2.3e-14 82.0 38 84.2
Nitab4.5_0004632g0020 Nicotiana tabacum HOM05D008490 ORTHO05D010725 2.0e-10 68.9 43 67.4
CSS0002229 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 3.4e-10 68.2 50 64.0
Nitab4.5_0000127g0060 Nicotiana tabacum HOM05D008490 ORTHO05D010725 7.6e-10 67.0 59 57.6
Sc25g0002270 Simmondsia chinensis HOM05D008490 ORTHO05D010725 7.9e-07 57.0 26 84.6


User provided reference genes

Program Settings