Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 1.1e-90 336.7 174 100.0
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 1.3e-67 260.0 182 79.1
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 2.5e-63 245.7 169 81.7
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 4.2e-58 228.4 161 78.3
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 1.1e-53 213.8 182 69.8
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 1.1e-53 213.8 182 67.6
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 1.8e-48 196.4 175 65.7
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 1.7e-46 189.9 180 60.0
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 1.7e-46 189.9 143 62.2
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 4.5e-44 181.8 181 58.6
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 4.5e-44 181.8 173 57.2
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 7.7e-44 181.0 180 56.1
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 7.7e-44 181.0 154 58.4
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 1.7e-43 179.9 174 58.0
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 3.8e-43 178.7 180 55.6
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 1.1e-42 177.2 143 64.3
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 1.5e-42 176.8 147 62.6
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 3.2e-42 175.6 175 57.1
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 4.2e-42 175.3 175 57.1
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 4.2e-42 175.3 175 57.1
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 7.2e-42 174.5 179 55.9
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 9.4e-42 174.1 154 57.8
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 1.8e-40 169.9 177 57.6
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 6.7e-40 167.9 175 54.9
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 1.5e-39 166.8 149 58.4
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 3.3e-39 165.6 150 56.0
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 5.7e-39 164.9 144 56.9
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 2.8e-38 162.5 142 56.3
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 3.7e-38 162.2 142 56.3
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 4.8e-38 161.8 174 51.7
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 8.2e-38 161.0 148 58.8
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 1.1e-37 160.6 146 57.5
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 1.8e-37 159.8 176 51.1
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 3.1e-37 159.1 177 53.1
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 9.1e-37 157.5 142 54.9
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 1.2e-36 157.1 131 60.3
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 1.3e-35 153.7 131 60.3
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 5.0e-35 151.8 177 47.5
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 2.5e-34 149.4 147 59.9
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 2.5e-34 149.4 155 51.0
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 1.6e-33 146.7 149 54.4
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 6.1e-33 144.8 182 48.9
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 6.1e-33 144.8 182 48.9
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 1.8e-32 143.3 134 56.7
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 2.3e-32 142.9 167 50.9
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 1.2e-31 140.6 134 56.0
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 2.0e-31 139.8 158 51.9
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 3.4e-31 139.0 178 48.9
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 3.4e-31 139.0 158 51.9
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 4.4e-31 138.7 139 56.8
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 7.5e-31 137.9 180 48.3
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 9.8e-31 137.5 128 57.0
Aa31LG8G14990 Aethionema arabicum HOM05D003374 ORTHO05D009470 1.3e-30 137.1 153 49.7
BcaB08g34755 Brassica carinata HOM05D003374 ORTHO05D009470 1.3e-30 137.1 178 48.9
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 2.8e-30 136.0 128 58.6
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 2.8e-30 136.0 116 59.5
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 4.8e-30 135.2 171 45.6
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 6.3e-30 134.8 160 51.2
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 1.4e-29 133.7 184 47.8
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 1.8e-29 133.3 164 48.8
BcaC01g02894 Brassica carinata HOM05D003374 ORTHO05D009470 3.1e-29 132.5 176 45.5
BolC3t18125H Brassica oleracea HOM05D003374 ORTHO05D009470 3.1e-29 132.5 176 45.5
Carub.0003s3182 Capsella rubella HOM05D003374 ORTHO05D009470 4.1e-29 132.1 156 52.6
THA.LOC104819731 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 4.1e-29 132.1 178 46.1
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 7.0e-29 131.3 139 51.1
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 9.1e-29 131.0 158 50.0
C03p58640 Brassica napus HOM05D003374 ORTHO05D009470 9.1e-29 131.0 172 45.3
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 9.1e-29 131.0 144 49.3
A06p33690 Brassica napus HOM05D003374 ORTHO05D009470 1.2e-28 130.6 176 45.5
BraA06t26303Z Brassica rapa HOM05D003374 ORTHO05D009470 1.2e-28 130.6 176 45.5
MSTRG.24362 Avicennia marina HOM05D003374 ORTHO05D009470 2.0e-28 129.8 123 54.5
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 2.0e-28 129.8 177 48.6
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 3.5e-28 129.0 119 53.8
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 1.0e-27 127.5 140 50.7
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 2.3e-27 126.3 175 43.4
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 2.3e-27 126.3 139 50.4
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 2.9e-27 125.9 132 48.5
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 6.5e-27 124.8 188 45.7
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 1.5e-26 123.6 118 56.8
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 2.5e-26 122.9 125 55.2
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 7.2e-26 121.3 117 55.6
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 3.6e-25 119.0 122 52.5
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 6.1e-25 118.2 137 46.0
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 1.8e-24 116.7 101 62.4
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 1.8e-24 116.7 101 62.4
Migut.N02761 Erythranthe guttata HOM05D003374 ORTHO05D009470 6.8e-24 114.8 121 52.9
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 1.2e-23 114.0 153 44.4
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 1.5e-23 113.6 91 63.7
TPR.G25136 Trifolium pratense HOM05D000373 ORTHO05D001763 3.7e-22 109.0 112 58.9
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 8.3e-22 107.8 109 51.4
Actinidia22937 Actinidia chinensis HOM05D003374 ORTHO05D009470 3.1e-21 105.9 103 57.3
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 5.4e-21 105.1 109 50.5
COL.COLO4_22495 Corchorus olitorius HOM05D003374 ORTHO05D009470 5.9e-20 101.7 92 58.7
unitig_578.g16135 Utricularia gibba HOM05D003374 ORTHO05D009470 3.3e-18 95.9 96 52.1
Sc18g0006270 Simmondsia chinensis HOM05D003374 ORTHO05D009470 1.2e-17 94.0 103 53.4
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 4.9e-14 82.0 107 45.8
Actinidia17405 Actinidia chinensis HOM05D000373 ORTHO05D001763 2.4e-13 79.7 100 53.0
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 9.2e-13 77.8 95 45.3
Solyc02g083380.3 Solanum lycopersicum HOM05D003374 ORTHO05D009470 6.6e-11 71.6 75 49.3
Duzib145G0007 Durio zibethinus HOM05D003374 ORTHO05D009470 7.3e-10 68.2 71 49.3
ATR0346G001 Amborella trichopoda HOM05D003374 ORTHO05D009470 1.2e-09 67.4 62 51.6
Ah.01g008140 Amaranthus hybridus HOM05D003374 ORTHO05D009470 4.7e-09 65.5 91 46.2
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 4.0e-08 62.4 88 38.6
Os04g0560700 Oryza sativa ssp. japonica HOM05D003374 ORTHO05D009470 3.7e-06 55.8 76 39.5


User provided reference genes

Program Settings