Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G104600 Phaseolus vulgaris HOM05D003374 ORTHO05D009415 1.3e-69 266.2 126 100.0
Glyma.11G081000 Glycine max HOM05D003374 ORTHO05D009415 8.0e-59 230.3 126 84.1
Ca_24943_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009415 1.2e-57 226.5 126 80.2
TPR.G25106 Trifolium pratense HOM05D003374 ORTHO05D009415 1.3e-56 223.0 126 79.4
Psat2g152000 Pisum sativum HOM05D003374 ORTHO05D009415 4.9e-56 221.1 126 78.6
Medtr5g022990 Medicago truncatula HOM05D003374 ORTHO05D009415 1.4e-55 219.5 124 78.2
Oeu022072.1 Olea europaea HOM05D003374 ORTHO05D009415 3.2e-55 218.4 124 76.6
Lj2g0014685 Lotus japonicus HOM05D003374 ORTHO05D009415 5.4e-55 217.6 123 80.5
Manes.01G150900 Manihot esculenta HOM05D003374 ORTHO05D009415 7.0e-55 217.2 124 79.0
CiPaw.13G118300 Carya illinoinensis HOM05D003374 ORTHO05D009415 1.2e-54 216.5 124 76.6
Cpa.g.sc6.314 Carica papaya HOM05D003374 ORTHO05D009415 3.5e-54 214.9 123 79.7
CsaV3_3G000500 Cucumis sativus L. HOM05D003374 ORTHO05D009415 3.5e-54 214.9 124 76.6
QL06p052083 Quercus lobata HOM05D003374 ORTHO05D009415 5.9e-54 214.2 124 77.4
Eucgr.J02491 Eucalyptus grandis HOM05D003374 ORTHO05D009415 1.0e-53 213.4 124 76.6
COL.COLO4_22496 Corchorus olitorius HOM05D003374 ORTHO05D009415 1.3e-53 213.0 124 75.8
Nn6g31909 Nelumbo nucifera HOM05D003374 ORTHO05D009415 2.3e-53 212.2 124 76.6
Gorai.003G005800 Gossypium raimondii HOM05D003374 ORTHO05D009415 2.9e-53 211.8 124 75.0
TWI73G0214 Tripterygium wilfordii HOM05D003374 ORTHO05D009415 3.9e-53 211.5 122 77.0
Lalb_Chr05g0212171 Lupinus albus HOM05D003374 ORTHO05D009415 6.6e-53 210.7 125 76.8
Oeu050858.1 Olea europaea HOM05D003374 ORTHO05D009415 6.6e-53 210.7 124 73.4
GSVIVG01005194001 Vitis vinifera HOM05D003374 ORTHO05D009415 6.6e-53 210.7 120 76.7
CiPaw.08G125700 Carya illinoinensis HOM05D003374 ORTHO05D009415 3.3e-52 208.4 124 74.2
Gohir.D03G005400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 3.3e-52 208.4 124 73.4
Duzib147G0846 Durio zibethinus HOM05D003374 ORTHO05D009415 4.3e-52 208.0 124 74.2
Duzib147G1310 Durio zibethinus HOM05D003374 ORTHO05D009415 5.6e-52 207.6 124 74.2
Migut.C00507 Erythranthe guttata HOM05D003374 ORTHO05D009415 5.6e-52 207.6 124 74.2
CSS0011665 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 7.3e-52 207.2 124 75.0
Gohir.A02G174400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 7.3e-52 207.2 124 74.2
Sabra05G0088200 Salix brachista HOM05D003374 ORTHO05D009415 1.6e-51 206.1 124 73.4
Prupe.7G175100 Prunus persica HOM05D003374 ORTHO05D009415 4.7e-51 204.5 123 73.2
THA.LOC104807515 Tarenaya hassleriana HOM05D003374 ORTHO05D009415 4.7e-51 204.5 123 74.8
Thecc.01G011400 Theobroma cacao HOM05D003374 ORTHO05D009415 4.7e-51 204.5 124 72.6
Cc07_g11320 Coffea canephora HOM05D003374 ORTHO05D009415 6.2e-51 204.1 124 70.2
Cc08_g04870 Coffea canephora HOM05D003374 ORTHO05D009415 6.2e-51 204.1 124 70.2
MD02G1123500 Malus domestica HOM05D003374 ORTHO05D009415 6.2e-51 204.1 123 73.2
Sopen02g028140 Solanum pennellii HOM05D003374 ORTHO05D009415 6.2e-51 204.1 124 73.4
Potri.005G107700 Populus trichocarpa HOM05D003374 ORTHO05D009415 8.0e-51 203.8 124 73.4
PGSC0003DMG400003664 Solanum tuberosum HOM05D003374 ORTHO05D009415 1.0e-50 203.4 124 73.4
CARHR107990 Cardamine hirsuta HOM05D003374 ORTHO05D009415 1.8e-50 202.6 120 76.7
DCAR_014045 Daucus carota HOM05D003374 ORTHO05D009415 1.8e-50 202.6 123 74.0
Rhsim10G0205600 Rhododendron simsii HOM05D003374 ORTHO05D009415 2.3e-50 202.2 122 73.0
CSS0020449 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 3.1e-50 201.8 124 73.4
Atru.chr3.908 Acer truncatum HOM05D003374 ORTHO05D009415 4.0e-50 201.4 124 71.8
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 4.0e-50 201.4 124 73.4
Solyc02g083360.1 Solanum lycopersicum HOM05D003374 ORTHO05D009415 4.0e-50 201.4 124 71.8
SGA_v2.0_scaffold16G07586 Striga asiatica HOM05D003374 ORTHO05D009415 6.8e-50 200.7 124 71.0
AL3G50700 Arabidopsis lyrata HOM05D003374 ORTHO05D009415 8.9e-50 200.3 120 75.0
Sc16g0001810 Simmondsia chinensis HOM05D003374 ORTHO05D009415 8.9e-50 200.3 124 71.0
Ah.03g134290 Amaranthus hybridus HOM05D003374 ORTHO05D009415 1.2e-49 199.9 124 70.2
Cfa007030 Carpinus fangiana HOM05D003374 ORTHO05D009415 1.2e-49 199.9 123 73.2
CANSAT25G2243 Cannabis sativa HOM05D003374 ORTHO05D009415 1.5e-49 199.5 124 71.8
BcaC06g36302 Brassica carinata HOM05D003374 ORTHO05D009415 2.0e-49 199.1 120 74.2
CAN.G890.27 Capsicum annuum HOM05D003374 ORTHO05D009415 2.0e-49 199.1 124 71.8
C07p05590 Brassica napus HOM05D003374 ORTHO05D009415 2.6e-49 198.7 120 74.2
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 2.6e-49 198.7 112 76.8
BcaB03g16543 Brassica carinata HOM05D003374 ORTHO05D009415 3.4e-49 198.4 120 74.2
AT2G17705 Arabidopsis thaliana HOM05D003374 ORTHO05D009415 4.4e-49 198.0 123 72.4
BraA07t28129Z Brassica rapa HOM05D003374 ORTHO05D009415 4.4e-49 198.0 120 74.2
TAR376G1073 Trochodendron aralioides HOM05D003374 ORTHO05D009415 4.4e-49 198.0 124 71.0
Aqoxy6G01987 Aquilegia oxysepala HOM05D003374 ORTHO05D009415 5.8e-49 197.6 124 71.0
Lsat_1_v5_gn_2_75400 Lactuca sativa HOM05D003374 ORTHO05D009415 9.8e-49 196.8 124 70.2
Ciclev10026501m.g Citrus clementina HOM05D003374 ORTHO05D009415 1.3e-48 196.4 124 68.5
Dinv40145 Davidia involucrata HOM05D003374 ORTHO05D009415 1.3e-48 196.4 113 77.0
FvH4_1g11071 Fragaria vesca HOM05D003374 ORTHO05D009415 1.3e-48 196.4 123 70.7
TAR625G1333 Trochodendron aralioides HOM05D003374 ORTHO05D009415 1.7e-48 196.1 119 73.1
Carub.0003s3181 Capsella rubella HOM05D003374 ORTHO05D009415 2.9e-48 195.3 120 72.5
SalBow7G1184 Salvia bowleyana HOM05D003374 ORTHO05D009415 3.7e-48 194.9 124 70.2
Thhalv10023081m.g Eutrema salsugineum HOM05D003374 ORTHO05D009415 4.9e-48 194.5 122 70.5
Sp3g31110 Schrenkiella parvula HOM05D003374 ORTHO05D009415 8.3e-48 193.7 120 72.5
PSO541G5712 Papaver somniferum HOM05D003374 ORTHO05D009415 1.1e-47 193.4 124 71.0
ATR0661G346 Amborella trichopoda HOM05D003374 ORTHO05D009415 1.9e-47 192.6 120 71.7
MBI05_g46750_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009415 2.7e-46 188.7 109 75.2
HPP92_015019 Vanilla planifolia HOM05D003374 ORTHO05D009415 2.7e-46 188.7 124 66.9
HPP92_028513 Vanilla planifolia HOM05D003374 ORTHO05D009415 2.7e-46 188.7 124 66.9
PSO675G5709 Papaver somniferum HOM05D003374 ORTHO05D009415 6.0e-46 187.6 124 68.5
RcHm_v2.0_Chr2g0098341 Rosa chinensis HOM05D003374 ORTHO05D009415 6.0e-46 187.6 120 69.2
Actinidia22936 Actinidia chinensis HOM05D003374 ORTHO05D009415 6.6e-45 184.1 105 77.1
Nitab4.5_0002105g0060 Nicotiana tabacum HOM05D003374 ORTHO05D009415 1.1e-44 183.3 105 74.3
HanXRQChr14g0442031 Helianthus annuus HOM05D003374 ORTHO05D009415 2.5e-44 182.2 118 66.1
MSTRG.25049 Avicennia marina HOM05D003374 ORTHO05D009415 5.6e-44 181.0 111 70.3
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 9.5e-44 180.3 108 74.1
Nitab4.5_0006892g0030 Nicotiana tabacum HOM05D003374 ORTHO05D009415 9.5e-44 180.3 105 74.3
MD15G1237300 Malus domestica HOM05D003374 ORTHO05D009415 2.8e-43 178.7 141 59.6
unitig_26.g9807 Utricularia gibba HOM05D003374 ORTHO05D009415 3.6e-43 178.3 122 65.6
Aa31LG8G14980 Aethionema arabicum HOM05D003374 ORTHO05D009415 6.2e-43 177.6 107 72.9
Zm00001eb002870 Zea mays HOM05D003374 ORTHO05D009415 6.2e-43 177.6 124 63.7
Os03g0136500 Oryza sativa ssp. japonica HOM05D003374 ORTHO05D009415 1.8e-42 176.0 123 64.2
SEGI_17874 Sequoiadendron giganteum HOM05D003374 ORTHO05D009415 3.1e-42 175.3 121 66.1
Sed0013270 Sechium edule HOM05D003374 ORTHO05D009415 6.8e-42 174.1 99 76.8
MELO3C013742.2 Cucumis melo HOM05D003374 ORTHO05D009415 7.5e-41 170.6 99 72.7
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 4.1e-39 164.9 101 72.3
AagrBONN_evm.TU.Sc2ySwM_362.2709 Anthoceros agrestis HOM05D003374 ORTHO05D009415 5.1e-37 157.9 116 56.9
AagrBONN_evm.TU.Sc2ySwM_362.2707 Anthoceros agrestis HOM05D003374 ORTHO05D009415 1.8e-34 149.4 116 56.0
SMO013G0010 Selaginella moellendorffii HOM05D003374 ORTHO05D009415 1.7e-32 142.9 117 52.1
Glyma.01G162300 Glycine max HOM05D003374 ORTHO05D009415 4.9e-32 141.4 77 83.1
Sc16g0001870 Simmondsia chinensis HOM05D003374 ORTHO05D009415 1.1e-31 140.2 90 67.8
Pp3c17_11570 Physcomitrium patens HOM05D003374 ORTHO05D009415 2.3e-29 132.5 119 49.6
Pp3c1_28090 Physcomitrium patens HOM05D003374 ORTHO05D009415 6.2e-27 124.4 119 48.7
Pp3c2_13370 Physcomitrium patens HOM05D003374 ORTHO05D009415 1.1e-26 123.6 119 47.1
Mapoly0037s0042 Marchantia polymorpha HOM05D003374 ORTHO05D009415 2.6e-25 119.0 118 44.9
CBR_g80133 Chara braunii HOM05D003374 ORTHO05D009415 1.6e-19 99.8 108 39.8
Actinidia17404 Actinidia chinensis HOM05D003374 ORTHO05D009415 3.8e-16 88.6 100 45.0
Potri.005G070600 Populus trichocarpa HOM05D003340 ORTHO05D003775 4.5e-09 65.1 128 32.8
SGA_v2.0_scaffold52G18966 Striga asiatica HOM05D003340 ORTHO05D003775 5.8e-09 64.7 128 33.6
AagrBONN_evm.TU.Sc2ySwM_362.2682 Anthoceros agrestis HOM05D003340 ORTHO05D003775 3.8e-08 62.0 86 32.6
Sabra05G0057400 Salix brachista HOM05D003340 ORTHO05D003775 4.9e-08 61.6 85 34.1
Nn5g28288 Nelumbo nucifera HOM05D003340 ORTHO05D003775 6.4e-08 61.2 87 33.3
Lsat_1_v5_gn_1_10021 Lactuca sativa HOM05D003340 ORTHO05D003775 1.1e-07 60.5 87 34.5
Nn1g08798 Nelumbo nucifera HOM05D003340 ORTHO05D003775 2.4e-07 59.3 87 32.2
AUR62014338 Chenopodium quinoa HOM05D003340 ORTHO05D003775 3.2e-07 58.9 88 34.1
AUR62019080 Chenopodium quinoa HOM05D003340 ORTHO05D003775 3.2e-07 58.9 88 34.1
MSTRG.25383 Avicennia marina HOM05D003340 ORTHO05D003775 4.2e-07 58.5 130 30.0
AUR62006909 Chenopodium quinoa HOM05D003340 ORTHO05D003775 4.2e-07 58.5 84 32.1
SMO119G0032 Selaginella moellendorffii HOM05D003340 ORTHO05D003775 4.2e-07 58.5 85 32.9
Oeu017298.1 Olea europaea HOM05D003340 ORTHO05D003775 7.1e-07 57.8 87 32.2
Aqoxy6G00217 Aquilegia oxysepala HOM05D003340 ORTHO05D003775 1.2e-06 57.0 117 29.9
Lj4P627T24 Lonicera japonica HOM05D003340 ORTHO05D003775 1.2e-06 57.0 98 33.7
SalBow7G3799 Salvia bowleyana HOM05D003340 ORTHO05D003775 1.2e-06 57.0 86 34.9
PGR102G2107 Punica granatum HOM05D003340 ORTHO05D003775 1.6e-06 56.6 84 33.3
HPP92_019003 Vanilla planifolia HOM05D003340 ORTHO05D003775 1.6e-06 56.6 91 33.0
Hund26810 Selenicereus undatus HOM05D003340 ORTHO05D003775 2.1e-06 56.2 88 31.8
EL10Ac1g01010 Beta vulgaris HOM05D003340 ORTHO05D003775 2.7e-06 55.8 88 31.8
TWI74G0103 Tripterygium wilfordii HOM05D003340 ORTHO05D003775 2.7e-06 55.8 107 28.0
Eucgr.F04352 Eucalyptus grandis HOM05D003340 ORTHO05D003775 4.6e-06 55.1 129 29.5
EL10Ac4g09660 Beta vulgaris HOM05D003340 ORTHO05D003775 6.0e-06 54.7 84 29.8
Ah.06g188530 Amaranthus hybridus HOM05D003340 ORTHO05D003775 7.9e-06 54.3 86 31.4
Manes.02G163400 Manihot esculenta HOM05D003340 ORTHO05D003775 7.9e-06 54.3 87 33.3
Hund17293 Selenicereus undatus HOM05D003340 ORTHO05D003775 7.9e-06 54.3 98 32.7
Thecc.08G125400 Theobroma cacao HOM05D003340 ORTHO05D003775 7.9e-06 54.3 87 34.5
VMungo1309G0419 Vigna mungo HOM05D003340 ORTHO05D003775 7.9e-06 54.3 87 33.3


User provided reference genes

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