Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 3.8e-140 501.5 254 100.0
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 1.6e-135 486.1 254 97.6
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 2.7e-130 468.8 255 93.3
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 6.0e-130 467.6 254 92.9
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 2.2e-108 396.0 274 77.4
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 6.5e-108 394.4 265 78.5
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 9.3e-107 390.6 290 74.1
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 1.2e-106 390.2 290 74.1
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 1.6e-106 389.8 268 78.0
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 1.3e-103 380.2 282 72.3
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 1.4e-102 376.7 270 75.9
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 1.2e-101 373.6 296 71.3
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 1.3e-100 370.2 288 70.1
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 2.9e-100 369.0 292 69.5
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 3.8e-100 368.6 294 69.7
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 1.4e-99 366.7 267 76.8
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 3.6e-98 362.1 275 70.5
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 4.6e-98 361.7 279 69.9
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 3.0e-97 359.0 291 69.4
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.5e-96 356.7 284 68.0
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 2.0e-96 356.3 287 68.6
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 2.5e-96 355.9 300 66.7
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 4.3e-96 355.1 310 64.8
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 7.4e-96 354.4 288 67.0
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 9.7e-96 354.0 276 70.3
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 1.7e-95 353.2 277 70.8
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 1.7e-95 353.2 285 68.8
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 1.7e-95 353.2 289 67.8
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.8e-94 349.7 279 66.3
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.5e-93 346.7 286 67.5
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 2.0e-93 346.3 284 65.8
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 4.5e-93 345.1 282 68.4
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 7.7e-93 344.4 286 67.5
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 7.7e-93 344.4 284 68.3
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 7.7e-93 344.4 286 67.5
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 7.7e-93 344.4 289 66.8
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 1.0e-92 344.0 276 68.8
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.0e-92 344.0 292 65.1
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.0e-92 344.0 203 83.3
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.0e-92 344.0 280 66.4
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 1.3e-92 343.6 279 68.8
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 1.3e-92 343.6 287 66.9
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 1.7e-92 343.2 292 65.8
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 8.5e-92 340.9 294 65.0
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 9.4e-91 337.4 279 65.9
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 1.6e-90 336.7 284 65.1
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 1.6e-90 336.7 239 72.4
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 2.1e-90 336.3 287 65.5
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 3.6e-90 335.5 277 66.1
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 4.7e-90 335.1 285 64.2
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 1.4e-89 333.6 262 69.8
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 1.8e-89 333.2 292 65.1
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 1.8e-89 333.2 274 68.2
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 8.8e-89 330.9 285 62.8
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 2.0e-88 329.7 260 68.1
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 7.4e-88 327.8 314 60.5
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 7.4e-88 327.8 277 66.4
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 1.8e-86 323.2 271 64.6
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 1.8e-86 323.2 274 66.1
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 9.1e-86 320.9 246 67.9
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 2.0e-85 319.7 362 53.0
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 4.5e-85 318.5 303 57.8
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 2.9e-84 315.8 200 79.5
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 3.8e-84 315.5 275 62.9
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.1e-83 313.9 276 64.5
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 1.9e-83 313.2 204 77.0
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 1.9e-83 313.2 202 77.7
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 3.2e-83 312.4 200 77.5
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 2.1e-82 309.7 345 54.5
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 4.7e-82 308.5 285 64.6
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 6.1e-82 308.1 297 60.6
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 3.0e-81 305.8 281 59.8
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 4.0e-81 305.4 285 58.9
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 1.5e-80 303.5 274 60.9
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.3e-79 300.4 266 63.2
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 2.2e-79 299.7 282 59.6
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 4.8e-79 298.5 254 63.8
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 6.3e-79 298.1 280 60.4
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 8.2e-79 297.7 199 75.4
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 1.1e-78 297.4 281 60.1
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 3.8e-76 288.9 284 57.7
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.1e-75 287.3 307 55.7
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 3.2e-75 285.8 205 68.8
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 9.4e-75 284.3 252 60.7
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 1.2e-74 283.9 249 63.9
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 1.8e-73 280.0 159 87.4
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 2.3e-73 279.6 323 52.6
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 5.2e-73 278.5 204 67.2
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 8.8e-73 277.7 196 69.9
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 5.7e-72 275.0 305 52.8
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 7.5e-72 274.6 280 57.1
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 4.1e-70 268.9 272 57.0
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.2e-66 257.3 155 81.9
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 6.1e-66 255.0 230 62.2
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 1.8e-65 253.4 207 62.3
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 1.7e-63 246.9 207 65.2
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 1.4e-62 243.8 159 81.1
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 2.3e-60 236.5 311 47.3
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 8.6e-60 234.6 194 68.0
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 1.1e-59 234.2 262 58.0
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 7.8e-53 211.5 132 80.3
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.3e-52 210.7 134 82.1
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 6.4e-47 191.8 230 47.8
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 1.4e-46 190.7 212 52.4
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 4.7e-42 175.6 103 84.5
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 1.3e-39 167.5 175 57.7
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 1.2e-37 161.0 399 34.8
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 2.0e-32 143.7 140 57.9
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 3.3e-27 126.3 80 72.5
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 3.1e-25 119.8 102 62.7
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 7.6e-24 115.2 75 73.3
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 4.2e-22 109.4 283 33.6
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 7.1e-22 108.6 221 38.9
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 1.3e-10 71.2 71 54.9
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 6.2e-10 68.9 219 26.9
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.4e-09 67.8 48 62.5
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 3.1e-09 66.6 62 59.7
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 5.8e-08 62.4 38 78.9
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 1.7e-07 60.8 37 75.7
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 6.4e-07 58.9 37 75.7
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 6.4e-07 58.9 33 84.8


User provided reference genes

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