Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 1.1e-93 346.7 173 100.0
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 5.4e-82 307.8 173 87.9
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 8.1e-78 293.9 177 82.5
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 3.6e-70 268.5 173 75.7
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 4.0e-69 265.0 177 75.7
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 1.2e-68 263.5 176 75.0
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 4.2e-66 255.0 168 75.0
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 6.9e-61 237.7 172 66.9
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 4.9e-59 231.5 171 69.6
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 1.9e-58 229.6 145 71.0
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 1.9e-58 229.6 174 64.9
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 2.5e-58 229.2 169 66.3
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 5.5e-58 228.0 175 65.1
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 6.0e-57 224.6 145 69.0
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 6.0e-57 224.6 160 67.5
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 2.3e-56 222.6 172 62.8
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 6.7e-56 221.1 145 69.7
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 6.7e-56 221.1 135 74.1
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 1.1e-55 220.3 174 63.8
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 1.1e-55 220.3 144 69.4
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 1.5e-55 219.9 152 63.8
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 4.3e-55 218.4 131 75.6
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 7.4e-55 217.6 131 74.8
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 9.6e-55 217.2 116 86.2
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 2.1e-54 216.1 174 58.6
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 2.1e-54 216.1 140 69.3
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 2.1e-54 216.1 176 61.4
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 2.8e-54 215.7 172 62.8
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.1e-53 213.8 166 61.4
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 1.1e-53 213.8 169 62.7
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 1.1e-53 213.8 169 62.7
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 1.4e-53 213.4 131 72.5
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 1.8e-53 213.0 170 60.0
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 1.8e-53 213.0 131 72.5
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 1.8e-53 213.0 166 62.0
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 1.8e-53 213.0 136 69.9
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 2.4e-53 212.6 131 71.8
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 2.4e-53 212.6 179 59.8
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 3.1e-53 212.2 133 71.4
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 3.1e-53 212.2 174 60.9
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 4.1e-53 211.8 213 54.9
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 6.9e-53 211.1 171 60.2
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 9.0e-53 210.7 145 67.6
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 9.0e-53 210.7 148 66.9
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.2e-52 210.3 131 72.5
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 1.5e-52 209.9 135 69.6
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 1.5e-52 209.9 133 69.2
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 2.0e-52 209.5 131 71.8
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 3.4e-52 208.8 131 72.5
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 4.5e-52 208.4 132 72.7
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 5.8e-52 208.0 132 72.7
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 5.8e-52 208.0 129 73.6
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 5.8e-52 208.0 117 79.5
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 7.6e-52 207.6 148 66.2
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.0e-51 207.2 131 71.0
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 1.3e-51 206.8 127 74.8
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 2.2e-51 206.1 169 59.8
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 2.9e-51 205.7 131 71.0
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 2.9e-51 205.7 164 58.5
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 8.4e-51 204.1 151 64.2
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 8.4e-51 204.1 151 62.9
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 1.1e-50 203.8 110 84.5
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 1.9e-50 203.0 126 73.0
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.9e-50 203.0 136 69.1
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 1.9e-50 203.0 136 69.1
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 4.2e-50 201.8 151 64.2
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 1.2e-49 200.3 124 71.8
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 1.6e-49 199.9 143 64.3
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 3.5e-49 198.7 128 72.7
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 1.0e-48 197.2 159 59.7
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 1.0e-48 197.2 161 60.2
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 3.0e-48 195.7 135 63.7
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 2.5e-47 192.6 182 56.6
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 5.7e-47 191.4 125 70.4
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 9.7e-47 190.7 148 57.4
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 2.8e-46 189.1 136 64.7
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 4.8e-46 188.3 144 59.0
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 4.8e-46 188.3 127 68.5
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.1e-45 187.2 138 61.6
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 3.1e-45 185.7 222 45.9
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 4.1e-45 185.3 135 68.1
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 6.9e-45 184.5 107 72.9
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 2.0e-44 183.0 102 77.5
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 1.0e-43 180.6 110 69.1
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 2.2e-43 179.5 172 55.8
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 1.9e-42 176.4 102 71.6
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 9.4e-42 174.1 151 62.9
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 1.2e-41 173.7 162 53.1
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 4.6e-41 171.8 108 71.3
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 1.4e-37 160.2 111 66.7
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 2.9e-35 152.5 91 68.1
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 1.1e-34 150.6 120 58.3
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 4.7e-33 145.2 100 61.0
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 2.3e-32 142.9 108 57.4
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 2.0e-31 139.8 128 52.3
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 5.3e-29 131.7 127 50.4
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 7.0e-29 131.3 104 54.8
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 2.9e-27 125.9 91 58.2
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 2.1e-25 119.8 129 48.8
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 4.0e-24 115.5 125 46.4
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 6.7e-24 114.8 89 53.9
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 9.7e-23 110.9 79 68.4
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 1.1e-21 107.5 68 67.6
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 2.2e-19 99.8 59 71.2
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 1.2e-17 94.0 88 48.9
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 3.4e-15 85.9 98 51.0


User provided reference genes

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