Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 4.6e-110 401.4 219 100.0
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 6.6e-93 344.4 215 87.4
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 5.1e-69 265.0 209 71.8
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 5.3e-66 255.0 216 67.1
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 4.5e-65 251.9 230 64.3
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 1.3e-64 250.4 202 69.3
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 6.5e-64 248.1 202 68.8
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 5.7e-52 208.4 166 65.7
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 1.3e-51 207.2 142 79.6
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 2.9e-48 196.1 217 52.5
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 2.0e-44 183.3 209 52.6
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 2.6e-44 183.0 142 71.8
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 3.7e-43 179.1 207 55.6
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 1.4e-42 177.2 209 49.3
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 1.4e-42 177.2 216 51.9
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 9.1e-42 174.5 209 50.7
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 1.3e-40 170.6 199 51.3
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 1.7e-40 170.2 209 48.8
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 6.5e-40 168.3 199 51.8
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 8.5e-40 167.9 209 50.2
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 1.9e-39 166.8 227 47.6
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 4.2e-39 165.6 207 48.8
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 7.2e-39 164.9 201 49.8
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 7.2e-39 164.9 207 48.3
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 9.4e-39 164.5 205 49.8
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 7.9e-38 161.4 209 46.9
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 1.0e-37 161.0 209 47.8
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 1.1e-36 157.5 214 46.3
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 7.4e-36 154.8 229 42.4
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 6.3e-35 151.8 209 48.3
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 8.2e-35 151.4 208 44.7
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 2.4e-34 149.8 213 43.7
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 4.1e-34 149.1 199 45.7
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 5.3e-34 148.7 197 47.7
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 5.3e-34 148.7 213 43.7
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 3.5e-33 146.0 190 46.3
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 3.5e-33 146.0 209 43.5
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 7.7e-33 144.8 201 47.8
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 3.8e-32 142.5 209 41.6
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 8.5e-32 141.4 209 42.1
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 3.2e-31 139.4 215 41.9
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 3.2e-31 139.4 215 41.9
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 2.7e-30 136.3 199 44.2
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 8.0e-30 134.8 205 42.9
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 1.5e-28 130.6 218 42.7
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 2.0e-28 130.2 219 44.3
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 4.4e-28 129.0 199 42.7
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 4.4e-28 129.0 199 43.2
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 4.4e-28 129.0 211 44.5
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 5.7e-28 128.6 200 44.0
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 9.7e-28 127.9 217 42.4
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.7e-27 127.1 209 40.2
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 2.8e-27 126.3 208 40.4
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 6.3e-27 125.2 151 49.0
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 8.2e-27 124.8 209 40.2
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.4e-26 124.0 189 43.4
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 1.8e-26 123.6 151 49.0
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 2.4e-26 123.2 150 49.3
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 5.3e-26 122.1 150 49.3
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 7.0e-26 121.7 151 49.7
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 9.1e-26 121.3 150 48.7
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 8.5e-24 114.8 148 47.3
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 1.1e-23 114.4 161 45.3
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.5e-23 113.2 142 47.9
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 7.2e-23 111.7 118 56.8
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 2.0e-20 103.6 142 44.4
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 9.8e-20 101.3 183 39.9
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.7e-19 100.5 202 35.1
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 1.1e-18 97.8 142 47.9
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 1.8e-18 97.1 162 41.4
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 1.8e-18 97.1 118 47.5
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 3.1e-18 96.3 142 43.7
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 5.4e-18 95.5 126 46.0
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 7.0e-18 95.1 199 36.2
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 9.1e-18 94.7 119 45.4
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.6e-17 94.0 199 36.7
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 2.7e-17 93.2 199 36.2
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 2.2e-16 90.1 129 43.4
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 5.0e-16 89.0 108 47.2
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 1.1e-15 87.8 217 34.6
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 9.5e-15 84.7 163 37.4
arahy.Tifrunner.gnm1.ann1.D76417 Arachis hypogaea HOM05D007451 ORTHO05D009399 1.2e-14 84.3 123 44.7
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 6.1e-14 82.0 143 39.9
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 1.0e-13 81.3 102 49.0
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 1.8e-13 80.5 106 46.2
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 8.8e-13 78.2 143 39.2
TPR.G40722 Trifolium pratense HOM05D007451 ORTHO05D009399 8.8e-13 78.2 54 74.1
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 2.6e-12 76.6 147 40.1
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 3.1e-10 69.7 129 39.5
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.5e-09 65.9 89 46.1
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 1.0e-08 64.7 124 36.3
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 1.0e-08 64.7 133 30.1
Os02g0244000 Oryza sativa ssp. japonica HOM05D007451 ORTHO05D009399 1.3e-08 64.3 114 38.6
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.1e-07 61.2 93 39.8
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 3.6e-06 56.2 83 39.8


User provided reference genes

Program Settings