Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G093100 Phaseolus vulgaris HOM05D011582 ORTHO05D010299 3.4e-52 208.4 132 100.0
VMungo0251G2113 Vigna mungo HOM05D011582 ORTHO05D010299 5.5e-42 174.5 135 87.4
Glyma.07G216800 Glycine max HOM05D011582 ORTHO05D010299 2.3e-32 142.5 143 76.9
Glyma.20G013700 Glycine max HOM05D011582 ORTHO05D010299 6.7e-32 141.0 140 77.9
Ca_18727_v3 Cicer arietinum L. HOM05D011582 ORTHO05D010299 4.8e-22 108.2 138 68.8
Lj4g0017408 Lotus japonicus HOM05D011582 ORTHO05D010299 1.5e-20 103.2 145 61.4
TPR.G35414 Trifolium pratense HOM05D011582 ORTHO05D010299 5.0e-19 98.2 137 61.3
Medtr4g084970 Medicago truncatula HOM05D011582 ORTHO05D010299 3.2e-18 95.5 140 60.0
Lalb_Chr05g0219431 Lupinus albus HOM05D011582 ORTHO05D010299 9.4e-18 94.0 138 63.0
Glyma.07G165300 Glycine max HOM05D011582 ORTHO05D010299 2.0e-15 86.3 148 53.4
Psat7g129520 Pisum sativum HOM05D011582 ORTHO05D010299 2.0e-15 86.3 144 57.6
Lalb_Chr04g0258631 Lupinus albus HOM05D011582 ORTHO05D010299 2.2e-14 82.8 137 51.1
Lalb_Chr10g0096201 Lupinus albus HOM05D011582 ORTHO05D010299 3.8e-11 72.0 141 44.7
Lj2g0021028 Lotus japonicus HOM05D011582 ORTHO05D010299 1.5e-10 70.1 155 51.0
Potri.010G113300 Populus trichocarpa HOM05D009257 ORTHO05D010622 1.0e-08 63.9 136 51.5
Duzib251G0093 Durio zibethinus HOM05D009257 ORTHO05D010299 1.4e-08 63.5 139 43.2
Duzib268G0344 Durio zibethinus HOM05D009257 ORTHO05D010299 4.0e-08 62.0 145 46.2
Gohir.A03G121900 Gossypium hirsutum HOM05D009257 ORTHO05D010299 5.2e-08 61.6 143 44.1
Gohir.D02G144800 Gossypium hirsutum HOM05D009257 ORTHO05D010299 5.2e-08 61.6 143 44.1
Gorai.005G162200 Gossypium raimondii HOM05D009257 ORTHO05D010299 5.2e-08 61.6 143 47.6
TAR630G0006 Trochodendron aralioides HOM05D009257 ORTHO05D010622 6.7e-08 61.2 127 48.0
CANSAT01G1038 Cannabis sativa HOM05D011582 ORTHO05D013822 1.2e-07 60.5 127 48.8
Haze_11006 Corylus avellana HOM05D012022 ORTHO05D013822 1.5e-07 60.1 51 60.8
Manes.17G076800 Manihot esculenta HOM05D009257 ORTHO05D010622 1.5e-07 60.1 111 58.6
Sed0015271 Sechium edule HOM05D031424 ORTHO05D010622 3.3e-07 58.9 120 55.8
Phvul.003G023700 Phaseolus vulgaris HOM05D011582 ORTHO05D010299 4.4e-07 58.5 170 42.9
Cfa008608 Carpinus fangiana HOM05D012022 ORTHO05D013822 5.7e-07 58.2 51 58.8
Dinv07644 Davidia involucrata HOM05D009257 ORTHO05D010622 1.3e-06 57.0 125 57.6
Duzib248G0803 Durio zibethinus HOM05D009257 ORTHO05D010299 1.3e-06 57.0 143 44.8
Potri.008G129100 Populus trichocarpa HOM05D009257 ORTHO05D010622 1.3e-06 57.0 146 38.4
Thecc.02G281400 Theobroma cacao HOM05D009257 ORTHO05D010299 1.3e-06 57.0 136 42.6
TWI75G1765 Tripterygium wilfordii HOM05D009257 ORTHO05D010622 1.3e-06 57.0 110 55.5
DCAR_026775 Daucus carota HOM05D009525 ORTHO05D010622 1.7e-06 56.6 129 45.0
Psat6g042880 Pisum sativum HOM05D033774 ORTHO05D010299 2.2e-06 56.2 52 59.6
DCAR_023605 Daucus carota HOM05D009525 ORTHO05D010622 2.8e-06 55.8 128 38.3
Manes.15G127400 Manihot esculenta HOM05D009257 ORTHO05D010622 4.8e-06 55.1 95 64.2


User provided reference genes

Program Settings