Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G091800 Phaseolus vulgaris HOM05D004684 ORTHO05D006904 2.8e-70 268.5 131 100.0
Phvul.002G322100 Phaseolus vulgaris HOM05D004684 ORTHO05D006904 9.6e-47 190.3 135 74.1
VMungo0251G0467 Vigna mungo HOM05D004684 ORTHO05D006904 1.2e-46 189.9 135 74.1
Glyma.08G047100 Glycine max HOM05D004684 ORTHO05D006904 1.1e-45 186.8 136 72.8
Glyma.05G240000 Glycine max HOM05D004684 ORTHO05D006904 3.1e-45 185.3 136 72.1
Ca_04899_v3 Cicer arietinum L. HOM05D004684 ORTHO05D006904 1.5e-44 183.0 136 70.6
Lalb_Chr09g0330801 Lupinus albus HOM05D004684 ORTHO05D006904 1.5e-44 183.0 136 69.1
TPR.G38256 Trifolium pratense HOM05D004684 ORTHO05D006904 2.0e-44 182.6 134 70.9
Lj4g0013294 Lotus japonicus HOM05D004684 ORTHO05D006904 1.3e-43 179.9 136 69.9
Medtr5g055940 Medicago truncatula HOM05D004684 ORTHO05D006904 1.3e-43 179.9 136 70.6
Lalb_Chr05g0222141 Lupinus albus HOM05D004684 ORTHO05D006904 2.2e-43 179.1 134 68.7
arahy.Tifrunner.gnm1.ann1.14QJGF Arachis hypogaea HOM05D004684 ORTHO05D006904 3.8e-43 178.3 134 68.7
arahy.Tifrunner.gnm1.ann1.1TG9FP Arachis hypogaea HOM05D004684 ORTHO05D006904 3.8e-43 178.3 134 68.7
Lj4g0011200 Lotus japonicus HOM05D004684 ORTHO05D006904 3.8e-43 178.3 136 69.1
Gohir.A09G231100 Gossypium hirsutum HOM05D004684 ORTHO05D006904 3.2e-42 175.3 136 65.4
Gorai.006G255000 Gossypium raimondii HOM05D004684 ORTHO05D006904 3.2e-42 175.3 136 65.4
Thecc.04G266300 Theobroma cacao HOM05D004684 ORTHO05D006904 4.2e-42 174.9 136 66.2
MELO3C023021.2 Cucumis melo HOM05D004684 ORTHO05D006904 5.4e-42 174.5 134 67.2
Sed0004125 Sechium edule HOM05D004684 ORTHO05D006904 5.4e-42 174.5 134 67.2
CiPaw.01G176700 Carya illinoinensis HOM05D004684 ORTHO05D006904 7.1e-42 174.1 134 67.9
ClCG06G007290 Citrullus lanatus HOM05D004684 ORTHO05D006904 7.1e-42 174.1 134 66.4
CsaV3_2G012390 Cucumis sativus L. HOM05D004684 ORTHO05D006904 1.6e-41 172.9 134 66.4
Gohir.D09G232200 Gossypium hirsutum HOM05D004684 ORTHO05D006904 1.6e-41 172.9 136 64.7
Cfa014797 Carpinus fangiana HOM05D004684 ORTHO05D006904 2.1e-41 172.6 134 66.4
Duzib212G0777 Durio zibethinus HOM05D004684 ORTHO05D006904 2.7e-41 172.2 136 65.4
THA.LOC104804573 Tarenaya hassleriana HOM05D004684 ORTHO05D006904 3.5e-41 171.8 136 64.7
CAN.G812.19 Capsicum annuum HOM05D004684 ORTHO05D006904 4.6e-41 171.4 134 65.7
FvH4_4g05030 Fragaria vesca HOM05D004684 ORTHO05D006904 4.6e-41 171.4 136 64.0
FAN12G2037 Fragaria x ananassa HOM05D004684 ORTHO05D006904 4.6e-41 171.4 136 64.0
Ciclev10004652m.g Citrus clementina HOM05D004684 ORTHO05D006904 1.0e-40 170.2 134 65.7
Thhalv10002467m.g Eutrema salsugineum HOM05D004684 ORTHO05D006904 1.0e-40 170.2 134 64.2
Sabra10G0042300 Salix brachista HOM05D004684 ORTHO05D006904 1.0e-40 170.2 136 64.7
TAR636G2335 Trochodendron aralioides HOM05D002740 ORTHO05D003126 1.0e-40 170.2 134 64.9
Nitab4.5_0001041g0120 Nicotiana tabacum HOM05D004684 ORTHO05D006904 1.3e-40 169.9 134 64.9
Nitab4.5_0005154g0090 Nicotiana tabacum HOM05D004684 ORTHO05D006904 1.3e-40 169.9 134 64.9
Oeu059392.1 Olea europaea HOM05D004684 ORTHO05D006904 1.3e-40 169.9 134 65.7
Os11g0544800 Oryza sativa ssp. japonica HOM05D004684 ORTHO05D006904 1.3e-40 169.9 136 63.2
Haze_11481 Corylus avellana HOM05D004684 ORTHO05D006904 1.7e-40 169.5 134 65.7
QL06p021563 Quercus lobata HOM05D004684 ORTHO05D006904 1.7e-40 169.5 134 65.7
Dinv29794 Davidia involucrata HOM05D004684 ORTHO05D006904 2.3e-40 169.1 134 64.9
TWI09G1097 Tripterygium wilfordii HOM05D004684 ORTHO05D006904 2.3e-40 169.1 136 64.0
Eucgr.G01176 Eucalyptus grandis HOM05D004684 ORTHO05D006904 3.0e-40 168.7 136 63.2
HanXRQChr01g0023061 Helianthus annuus HOM05D004684 ORTHO05D006904 3.0e-40 168.7 134 63.4
Potri.008G172700 Populus trichocarpa HOM05D004684 ORTHO05D006904 3.9e-40 168.3 136 63.2
Prupe.1G050600 Prunus persica HOM05D004684 ORTHO05D006904 3.9e-40 168.3 136 63.2
Duzib151G0232 Durio zibethinus HOM05D004684 ORTHO05D006904 5.1e-40 167.9 136 62.5
Lj3A639G13 Lonicera japonica HOM05D004684 ORTHO05D006904 5.1e-40 167.9 134 64.2
RcHm_v2.0_Chr4g0395911 Rosa chinensis HOM05D004684 ORTHO05D006904 5.1e-40 167.9 136 62.5
HPP92_005111 Vanilla planifolia HOM05D004684 ORTHO05D006904 6.6e-40 167.5 134 62.7
RcHm_v2.0_Chr7g0203561 Rosa chinensis HOM05D004684 ORTHO05D006904 8.7e-40 167.2 136 62.5
Sp3g22110 Schrenkiella parvula HOM05D004684 ORTHO05D006904 8.7e-40 167.2 134 63.4
Manes.03G157750 Manihot esculenta HOM05D004684 ORTHO05D006904 1.1e-39 166.8 136 63.2
vmacro08564 Vaccinium macrocarpon HOM05D004684 ORTHO05D006904 1.1e-39 166.8 134 61.2
GSVIVG01027938001 Vitis vinifera HOM05D004684 ORTHO05D006904 1.1e-39 166.8 134 63.4
Aa31LG8G11000 Aethionema arabicum HOM05D004684 ORTHO05D006904 1.5e-39 166.4 134 63.4
CDE02G2675 Ceratophyllum demersum HOM05D004684 ORTHO05D006904 1.5e-39 166.4 134 61.9
Eucgr.H02859 Eucalyptus grandis HOM05D004684 ORTHO05D006904 1.9e-39 166.0 136 62.5
PGR031G2768 Punica granatum HOM05D004684 ORTHO05D006904 1.9e-39 166.0 134 63.4
BcaB03g14590 Brassica carinata HOM05D004684 ORTHO05D006904 2.5e-39 165.6 134 61.9
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 2.5e-39 165.6 134 63.4
PGSC0003DMG400001555 Solanum tuberosum HOM05D004684 ORTHO05D006904 2.5e-39 165.6 134 62.7
MD16G1228500 Malus domestica HOM05D004684 ORTHO05D006904 3.3e-39 165.2 136 61.8
Rhsim04G0170900 Rhododendron simsii HOM05D004684 ORTHO05D006904 3.3e-39 165.2 134 61.9
Aqoxy5G00132 Aquilegia oxysepala HOM05D004684 ORTHO05D006904 4.3e-39 164.9 134 61.2
Cpa.g.sc59.16 Carica papaya HOM05D004684 ORTHO05D006904 4.3e-39 164.9 136 61.0
MBI07_g08913_MAGBIO Magnolia biondii HOM05D004684 ORTHO05D006904 4.3e-39 164.9 134 60.4
AT1G48520 Arabidopsis thaliana HOM05D004684 ORTHO05D006904 5.6e-39 164.5 134 61.9
Carub.0003s2695 Capsella rubella HOM05D004684 ORTHO05D006904 7.3e-39 164.1 134 61.2
FAN22G2229 Fragaria x ananassa HOM05D004684 ORTHO05D006904 7.3e-39 164.1 146 58.9
Nn1g02992 Nelumbo nucifera HOM05D004684 ORTHO05D006904 7.3e-39 164.1 134 59.7
Solyc09g090840.3 Solanum lycopersicum HOM05D004684 ORTHO05D006904 7.3e-39 164.1 134 62.7
BcaC01g03327 Brassica carinata HOM05D004684 ORTHO05D006904 9.6e-39 163.7 134 60.4
A03p43590 Brassica napus HOM05D004684 ORTHO05D006904 9.6e-39 163.7 134 60.4
BraA03t13496Z Brassica rapa HOM05D004684 ORTHO05D006904 9.6e-39 163.7 134 60.4
Sc19g0005610 Simmondsia chinensis HOM05D004684 ORTHO05D006904 9.6e-39 163.7 134 61.9
AUR62031623 Chenopodium quinoa HOM05D004684 ORTHO05D006904 1.3e-38 163.3 134 61.2
CARHR100400 Cardamine hirsuta HOM05D004684 ORTHO05D006904 1.6e-38 162.9 134 61.2
ECA248G0897 Erigeron canadensis HOM05D004684 ORTHO05D006904 1.6e-38 162.9 134 61.9
PSO384G0234 Papaver somniferum HOM05D004684 ORTHO05D006904 1.6e-38 162.9 134 61.2
PSO832G1147 Papaver somniferum HOM05D004684 ORTHO05D006904 2.1e-38 162.5 134 60.4
THA.LOC104808741 Tarenaya hassleriana HOM05D004684 ORTHO05D006904 2.1e-38 162.5 135 63.0
C03p53620 Brassica napus HOM05D004684 ORTHO05D006904 2.8e-38 162.2 134 59.7
BolC3t17622H Brassica oleracea HOM05D004684 ORTHO05D006904 2.8e-38 162.2 134 59.7
CANSAT78G0903 Cannabis sativa HOM05D004684 ORTHO05D006904 2.8e-38 162.2 134 64.2
Lsat_1_v5_gn_1_75460 Lactuca sativa HOM05D004684 ORTHO05D006904 3.6e-38 161.8 134 61.9
Nitab4.5_0022682g0010 Nicotiana tabacum HOM05D004684 ORTHO05D006904 3.6e-38 161.8 134 64.9
Sopen09g033800 Solanum pennellii HOM05D004684 ORTHO05D006904 3.6e-38 161.8 134 61.9
CSS0041578 Camellia sinensis var. sinensis HOM05D004684 ORTHO05D006904 4.8e-38 161.4 134 60.4
CSS0049189 Camellia sinensis var. sinensis HOM05D004684 ORTHO05D006904 4.8e-38 161.4 134 60.4
Zm00001eb197630 Zea mays HOM05D004684 ORTHO05D006904 4.8e-38 161.4 134 59.0
Actinidia20844 Actinidia chinensis HOM05D004684 ORTHO05D006904 1.1e-37 160.2 134 60.4
AUR62015690 Chenopodium quinoa HOM05D004684 ORTHO05D006904 1.1e-37 160.2 134 60.4
MELO3C023047.2 Cucumis melo HOM05D004684 ORTHO05D006904 1.1e-37 160.2 129 63.6
Ah.04g153790 Amaranthus hybridus HOM05D004684 ORTHO05D006904 1.4e-37 159.8 134 59.7
AL3G43250 Arabidopsis lyrata HOM05D004684 ORTHO05D006904 1.4e-37 159.8 134 60.4
SalBow2G2567 Salvia bowleyana HOM05D004684 ORTHO05D006904 2.4e-37 159.1 134 61.2
SEGI_18338 Sequoiadendron giganteum HOM05D004684 ORTHO05D006904 1.2e-36 156.8 134 59.0
Migut.G00560 Erythranthe guttata HOM05D004684 ORTHO05D006904 1.5e-36 156.4 136 57.4
ATR0787G095 Amborella trichopoda HOM05D004684 ORTHO05D006904 4.4e-36 154.8 134 57.5
AagrBONN_evm.TU.Sc2ySwM_368.913 Anthoceros agrestis HOM05D004684 ORTHO05D006904 1.3e-35 153.3 132 57.6
Hund24872 Selenicereus undatus HOM05D004684 ORTHO05D006904 1.4e-34 149.8 185 47.6
Mapoly0107s0036 Marchantia polymorpha HOM05D004684 ORTHO05D006904 1.9e-34 149.4 134 56.0
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 7.1e-34 147.5 130 55.4
QL02p071976 Quercus lobata HOM05D004684 ORTHO05D006904 5.1e-32 141.4 136 56.6
EL10Ac3g06680 Beta vulgaris HOM05D004684 ORTHO05D006904 6.6e-32 141.0 177 45.2
CBR_g20386 Chara braunii HOM05D004684 ORTHO05D006904 6.6e-32 141.0 134 50.7
SMO273G0058 Selaginella moellendorffii HOM05D004684 ORTHO05D006904 4.3e-31 138.3 134 53.7
Potri.010G064700 Populus trichocarpa HOM05D004684 ORTHO05D006904 2.0e-28 129.4 129 54.3
Peaxi162Scf00531g00034 Petunia axillaris HOM05D004684 ORTHO05D006904 3.4e-28 128.6 111 59.5
MCO15G005 Micromonas commoda HOM05D004684 ORTHO05D006904 1.3e-27 126.7 132 47.7
PRCOL_00005018 Prasinoderma coloniale HOM05D004684 ORTHO05D006904 6.4e-27 124.4 129 52.7
MD13G1223700 Malus domestica HOM05D004684 ORTHO05D006904 1.8e-24 116.3 129 52.7
Psat2g106400 Pisum sativum HOM05D004684 ORTHO05D006904 5.1e-24 114.8 114 59.6
SMO147G0416 Selaginella moellendorffii HOM05D004684 ORTHO05D006904 5.1e-24 114.8 122 49.2
Psat2g046800 Pisum sativum HOM05D004684 ORTHO05D006904 6.9e-21 104.4 60 85.0
Cc01_g12830 Coffea canephora HOM05D004684 ORTHO05D006904 1.9e-18 96.3 60 75.0
Cc03_g06440 Coffea canephora HOM05D004684 ORTHO05D006904 1.9e-18 96.3 60 75.0
Cc03_g06430 Coffea canephora HOM05D004684 ORTHO05D006904 6.0e-17 91.3 52 80.8
Pp3s32_289 Physcomitrium patens HOM05D004684 ORTHO05D006904 1.3e-16 90.1 132 34.1
Rhsim02G0163300 Rhododendron simsii HOM05D004684 ORTHO05D006904 5.1e-16 88.2 53 75.5
SEGI_09601 Sequoiadendron giganteum HOM05D004684 ORTHO05D006904 1.1e-15 87.0 90 53.3
DCAR_018323 Daucus carota HOM05D004684 ORTHO05D000311 9.0e-13 77.4 64 60.9
unitig_748.g8291 Utricularia gibba HOM05D004684 ORTHO05D006904 1.4e-10 70.1 111 42.3
MCO02G423 Micromonas commoda HOM05D004684 ORTHO05D006904 9.7e-07 57.4 124 28.2


User provided reference genes

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