Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 6.8e-190 667.2 336 100.0
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 7.3e-176 620.5 336 93.2
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 1.4e-174 616.3 336 92.0
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 1.1e-171 606.7 336 90.2
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 2.1e-167 592.4 332 90.1
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 2.0e-165 585.9 318 92.5
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 2.6e-165 585.5 333 88.6
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 6.4e-164 580.9 320 90.6
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 2.7e-162 575.5 336 86.6
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 1.3e-153 546.6 330 83.3
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 4.8e-135 485.0 331 75.8
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 5.3e-134 481.5 322 76.1
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 1.2e-133 480.3 335 72.8
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 2.5e-131 472.6 323 73.4
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 4.2e-131 471.9 318 74.8
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 9.4e-131 470.7 318 75.2
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 9.4e-131 470.7 339 73.2
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 4.7e-130 468.4 322 73.0
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 3.0e-129 465.7 318 74.8
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.0e-129 465.7 337 72.1
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.9e-129 465.3 337 72.1
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.9e-129 465.3 337 72.1
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 5.2e-129 464.9 323 73.1
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 8.8e-129 464.2 338 70.7
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.1e-128 463.8 338 70.7
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.1e-128 463.8 337 71.5
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 1.5e-128 463.4 341 69.8
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 2.6e-128 462.6 324 72.2
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 4.4e-128 461.8 323 73.1
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 7.4e-128 461.1 342 68.7
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 7.4e-128 461.1 322 72.4
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 7.4e-128 461.1 322 71.7
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 9.7e-128 460.7 338 69.8
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 1.3e-127 460.3 319 70.5
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 1.3e-127 460.3 322 71.7
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 2.2e-127 459.5 327 71.9
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 3.7e-127 458.8 319 72.4
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 3.7e-127 458.8 319 74.6
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 1.1e-126 457.2 313 73.2
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.1e-126 457.2 337 71.5
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 1.1e-126 457.2 319 73.4
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 1.4e-126 456.8 322 71.7
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 1.8e-126 456.4 318 72.0
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 2.4e-126 456.1 319 73.4
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 5.3e-126 454.9 337 71.2
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 5.3e-126 454.9 342 69.9
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 7.0e-126 454.5 319 73.7
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 1.6e-125 453.4 322 71.4
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 2.0e-125 453.0 331 70.4
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 3.5e-125 452.2 342 69.6
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 2.2e-124 449.5 317 72.2
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 1.1e-123 447.2 339 69.0
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 1.5e-123 446.8 339 70.2
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 4.2e-123 445.3 316 70.9
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 5.5e-123 444.9 333 69.4
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 9.4e-123 444.1 315 70.2
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 1.2e-122 443.7 343 68.2
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 1.6e-122 443.4 320 71.6
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 2.7e-122 442.6 336 68.2
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 4.7e-122 441.8 322 69.3
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 6.1e-122 441.4 331 69.8
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 8.0e-122 441.0 315 69.8
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 1.0e-121 440.7 316 71.2
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 6.7e-121 438.0 327 68.5
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 6.7e-121 438.0 318 70.1
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 2.0e-120 436.4 322 68.6
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 4.4e-120 435.3 325 70.2
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 9.1e-118 427.6 337 65.9
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 2.7e-117 426.0 317 70.7
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.0e-116 424.1 336 64.9
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 1.1e-115 420.6 310 68.1
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 1.5e-115 420.2 333 66.7
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 1.5e-115 420.2 333 65.5
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 3.2e-115 419.1 312 68.9
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 1.2e-112 410.6 322 67.7
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.2e-111 406.4 275 74.5
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 4.1e-110 402.1 319 65.2
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 2.7e-109 399.4 275 72.4
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 1.9e-107 393.3 320 63.8
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 1.2e-106 390.6 314 65.3
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.1e-106 389.8 327 65.1
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.7e-103 379.0 322 62.1
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 7.0e-102 374.8 390 56.2
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 9.2e-102 374.4 347 59.4
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 4.0e-97 359.0 326 59.8
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 4.0e-97 359.0 316 61.4
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 5.2e-97 358.6 270 70.0
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 5.2e-97 358.6 416 50.2
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 5.8e-96 355.1 353 56.4
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 4.9e-95 352.1 332 57.2
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 3.0e-92 342.8 357 55.5
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.9e-91 340.1 336 52.7
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 2.3e-84 316.6 314 51.9
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 3.9e-84 315.8 312 54.2
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 3.5e-77 292.7 206 70.9
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 1.2e-74 284.3 241 63.9
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 2.3e-68 263.5 292 49.7
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.1e-62 244.6 273 51.6
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 3.1e-57 226.5 164 73.2
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 3.5e-53 213.0 355 39.2
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 4.3e-51 206.1 315 38.7
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 2.6e-48 196.8 199 51.8
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.3e-44 184.5 185 56.2
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.7e-39 167.5 104 79.8
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 3.2e-38 163.3 117 63.2
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.3e-34 151.4 113 65.5
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 1.4e-17 94.7 227 34.4
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 5.2e-12 76.3 76 55.3
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 1.1e-11 75.1 50 68.0
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 1.0e-07 62.0 51 54.9


User provided reference genes

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