Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 5.7e-104 380.9 194 100.0
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 3.8e-84 315.1 194 83.5
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 1.4e-73 280.0 198 74.7
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 1.8e-73 279.6 200 76.0
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 4.4e-72 275.0 200 73.0
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 1.3e-68 263.5 208 70.2
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 8.5e-68 260.8 205 68.8
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 7.2e-67 257.7 208 68.3
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 7.2e-67 257.7 205 68.3
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 1.2e-66 256.9 205 68.3
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 3.6e-66 255.4 193 69.9
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 3.6e-66 255.4 202 68.3
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 2.3e-65 252.7 198 68.7
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 3.0e-65 252.3 198 68.2
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 4.0e-65 251.9 200 66.5
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 5.2e-65 251.5 203 68.0
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 5.2e-65 251.5 197 70.1
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 5.2e-65 251.5 193 71.0
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 6.8e-65 251.1 200 69.0
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 1.5e-64 250.0 200 67.5
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 2.0e-64 249.6 198 67.2
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 2.0e-64 249.6 156 79.5
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 2.6e-64 249.2 203 68.0
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 4.4e-64 248.4 156 78.8
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 5.7e-64 248.1 173 72.8
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 9.8e-64 247.3 195 69.7
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 9.8e-64 247.3 194 69.6
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 1.3e-63 246.9 169 74.6
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 1.3e-63 246.9 202 66.8
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.7e-63 246.5 161 75.8
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.7e-63 246.5 165 74.5
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 3.7e-63 245.4 197 70.6
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 8.3e-63 244.2 157 79.0
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 8.3e-63 244.2 201 66.2
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 1.4e-62 243.4 165 73.3
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 2.4e-62 242.7 157 78.3
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 3.1e-62 242.3 199 67.3
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 4.1e-62 241.9 164 75.0
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 5.4e-62 241.5 199 68.3
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 5.4e-62 241.5 161 74.5
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 5.4e-62 241.5 199 66.8
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 5.4e-62 241.5 173 73.4
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 7.0e-62 241.1 195 69.2
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 7.0e-62 241.1 195 69.2
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 9.1e-62 240.7 161 74.5
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.6e-61 240.0 155 76.8
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 7.7e-61 237.7 159 77.4
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 7.7e-61 237.7 159 77.4
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 1.3e-60 236.9 162 75.9
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 1.7e-60 236.5 200 66.0
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 2.9e-60 235.7 134 85.8
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 2.9e-60 235.7 205 64.9
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 1.1e-59 233.8 201 64.7
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 3.2e-59 232.3 201 66.2
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 4.2e-59 231.9 159 71.7
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 4.2e-59 231.9 155 76.8
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 1.2e-58 230.3 199 64.3
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 1.6e-58 229.9 202 65.3
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 1.6e-58 229.9 196 63.8
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 2.1e-58 229.6 167 72.5
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 2.1e-58 229.6 146 78.1
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 3.6e-58 228.8 177 69.5
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 3.6e-58 228.8 202 63.9
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 4.7e-58 228.4 158 75.9
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 4.7e-58 228.4 198 65.7
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 6.1e-58 228.0 158 72.8
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 6.1e-58 228.0 158 72.8
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 8.0e-58 227.6 160 71.9
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 8.0e-58 227.6 198 65.2
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 1.0e-57 227.3 128 83.6
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 1.8e-57 226.5 196 64.8
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 2.3e-57 226.1 169 70.4
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 3.0e-57 225.7 194 64.4
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 6.8e-57 224.6 194 62.9
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 8.8e-57 224.2 202 62.9
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 1.2e-56 223.8 125 86.4
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 4.4e-56 221.9 200 63.0
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 4.4e-56 221.9 198 66.7
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 5.7e-56 221.5 156 71.2
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 5.7e-56 221.5 132 81.1
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 5.7e-56 221.5 132 81.1
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 7.5e-56 221.1 194 64.4
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 7.5e-56 221.1 196 62.2
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 9.8e-56 220.7 157 72.0
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 9.8e-56 220.7 198 63.1
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 1.7e-55 219.9 171 67.3
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 3.7e-55 218.8 128 81.2
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 8.3e-55 217.6 140 76.4
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 8.3e-55 217.6 116 87.9
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 1.1e-54 217.2 189 62.4
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 3.1e-54 215.7 197 59.9
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 2.7e-53 212.6 134 77.6
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 1.7e-52 209.9 121 83.5
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 6.8e-49 198.0 159 66.7
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 1.5e-48 196.8 126 73.8
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 1.4e-46 190.3 166 58.4
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 7.0e-46 188.0 156 62.8
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 9.2e-46 187.6 130 71.5
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 1.2e-45 187.2 207 49.8
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 1.0e-44 184.1 128 72.7
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 1.0e-44 184.1 143 66.4
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 2.3e-44 183.0 124 71.0
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 3.9e-44 182.2 113 75.2
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 3.9e-44 182.2 113 73.5
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 1.4e-41 173.7 119 69.7
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 9.2e-38 161.0 196 50.0
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 1.7e-36 156.8 128 64.8
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 5.0e-36 155.2 127 52.8
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 7.1e-22 108.2 130 36.9
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 3.3e-19 99.4 117 39.3
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 2.6e-16 89.7 52 76.9
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 3.4e-16 89.4 111 40.5
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 1.6e-13 80.5 126 30.2


User provided reference genes

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