Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 2.6e-197 691.8 337 100.0
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 6.9e-174 614.0 334 90.1
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 3.1e-158 562.0 340 83.2
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 3.6e-138 495.4 339 76.1
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 6.1e-138 494.6 337 71.8
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 6.1e-138 494.6 345 73.3
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 8.8e-137 490.7 347 72.3
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 4.8e-135 485.0 339 70.2
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 6.3e-135 484.6 339 70.5
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 1.8e-126 456.4 373 62.7
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 7.7e-125 451.1 319 70.8
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 1.5e-123 446.8 339 65.5
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 2.5e-123 446.0 258 81.0
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 9.4e-123 444.1 319 69.9
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 1.6e-122 443.4 348 64.7
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 3.6e-122 442.2 321 69.2
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 8.0e-122 441.0 317 69.4
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 3.0e-121 439.1 273 74.7
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 8.8e-121 437.6 249 82.7
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 7.5e-120 434.5 342 64.0
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 1.3e-119 433.7 340 64.7
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 3.7e-119 432.2 277 74.7
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 7.0e-118 427.9 278 73.4
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 1.2e-117 427.2 267 75.3
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 1.2e-117 427.2 257 79.0
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 2.0e-117 426.4 261 74.3
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 2.3e-116 422.9 285 73.0
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 5.0e-116 421.8 322 66.8
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 5.0e-116 421.8 322 66.8
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 6.6e-116 421.4 326 65.3
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 8.6e-116 421.0 275 72.4
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.5e-115 419.5 326 65.0
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 9.5e-115 417.5 330 63.0
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 2.8e-114 416.0 272 71.7
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 4.7e-114 415.2 360 61.4
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 6.1e-114 414.8 336 60.7
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 6.1e-114 414.8 341 62.5
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 1.4e-113 413.7 262 75.6
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 1.4e-113 413.7 257 72.8
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 1.8e-113 413.3 257 72.8
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 4.0e-113 412.1 260 72.3
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 6.8e-113 411.4 254 73.6
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 7.5e-112 407.9 273 70.0
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 1.3e-111 407.1 305 66.6
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 4.9e-111 405.2 284 66.5
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 1.8e-110 403.3 259 73.0
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 4.1e-110 402.1 286 65.7
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 4.1e-110 402.1 260 73.1
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 4.1e-110 402.1 255 72.5
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 7.0e-110 401.4 271 69.7
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 9.2e-110 401.0 287 65.5
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 1.2e-109 400.6 268 70.9
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 2.7e-109 399.4 291 68.4
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 3.5e-109 399.1 257 68.9
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 4.6e-109 398.7 289 66.8
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 4.6e-109 398.7 257 70.0
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 5.9e-109 398.3 268 70.1
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 5.9e-109 398.3 268 70.1
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 5.9e-109 398.3 268 70.1
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 5.9e-109 398.3 415 53.5
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 8.6e-108 394.4 322 60.2
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 1.9e-107 393.3 267 68.2
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 2.5e-107 392.9 225 80.9
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 4.3e-107 392.1 267 70.8
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 4.3e-107 392.1 268 67.9
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 7.3e-107 391.3 267 68.2
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 9.5e-107 391.0 293 68.3
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 1.4e-105 387.1 268 68.7
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 1.8e-105 386.7 379 55.1
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 5.2e-105 385.2 257 68.1
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 2.0e-104 383.3 254 70.5
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 3.4e-104 382.5 347 57.6
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 9.8e-104 380.9 310 58.1
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 4.1e-102 375.6 248 67.7
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 9.2e-102 374.4 225 76.0
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 1.2e-101 374.0 242 72.3
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 1.7e-100 370.2 250 70.8
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 1.1e-99 367.5 251 65.7
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 2.2e-95 353.2 212 79.2
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 9.2e-94 347.8 267 62.2
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 3.3e-91 339.3 278 59.4
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 1.6e-90 337.0 293 55.3
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 1.7e-87 327.0 347 51.0
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 9.2e-86 321.2 164 92.1
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 4.6e-85 318.9 252 59.5
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 5.6e-83 312.0 350 48.6
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 4.7e-82 308.9 269 56.5
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 1.5e-80 303.9 228 61.8
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 2.2e-79 300.1 181 75.1
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 3.8e-79 299.3 181 74.0
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 9.3e-78 294.7 191 70.7
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 1.6e-77 293.9 190 68.9
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.6e-77 293.9 230 59.6
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.6e-77 293.9 230 59.6
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 2.1e-74 283.5 248 59.7
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 3.6e-74 282.7 262 50.0
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 6.9e-73 278.5 178 72.5
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 8.4e-71 271.6 279 47.7
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 3.5e-69 266.2 193 64.2
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 1.7e-68 263.8 194 69.6
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 7.4e-67 258.5 167 68.9
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.2e-63 246.9 319 46.4
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.2e-63 246.9 319 46.4
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 1.5e-59 234.2 215 50.7
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 2.5e-54 216.9 336 40.2
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 2.3e-52 210.3 137 75.9
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 6.1e-45 185.7 130 63.8
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.5e-43 181.0 130 63.1
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 4.5e-40 169.5 242 38.4
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 5.5e-38 162.5 130 59.2
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 6.1e-29 132.5 102 60.8
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 1.8e-28 131.0 92 64.1
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 2.6e-27 127.1 252 34.5
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 4.5e-24 116.3 255 32.5
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 1.0e-20 105.1 73 64.4
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 1.4e-20 104.8 63 79.4
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 6.7e-20 102.4 266 30.1
Haze_17459 Corylus avellana HOM05D006863 ORTHO05D044797 2.3e-12 77.4 92 51.1
Psat2g101840 Pisum sativum HOM05D006863 ORTHO05D044797 6.3e-10 69.3 65 55.4


User provided reference genes

Program Settings