Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 3.6e-135 485.0 254 100.0
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 4.6e-114 414.8 254 86.2
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 1.1e-88 330.5 257 72.0
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 8.2e-87 324.3 257 71.6
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 2.2e-76 289.7 256 64.8
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 8.5e-76 287.7 256 62.9
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 8.5e-76 287.7 256 62.9
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 2.4e-70 269.6 250 61.2
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 1.2e-61 240.7 253 55.7
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 2.5e-59 233.0 248 50.8
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 3.3e-59 232.6 265 53.2
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 4.3e-59 232.3 269 49.8
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 5.7e-56 221.9 230 56.1
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 2.2e-55 219.9 270 45.2
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 2.2e-55 219.9 269 46.8
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 3.7e-55 219.2 237 50.6
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 4.1e-54 215.7 269 47.6
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 5.4e-54 215.3 262 46.6
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 5.4e-54 215.3 262 46.6
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 1.6e-53 213.8 264 47.0
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 2.0e-53 213.4 262 46.9
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 5.9e-53 211.8 265 46.0
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 7.8e-53 211.5 271 44.6
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 1.0e-52 211.1 269 46.5
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 1.0e-52 211.1 269 46.5
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 1.7e-52 210.3 269 46.1
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 3.0e-52 209.5 265 46.0
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 3.0e-52 209.5 255 47.8
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 3.0e-52 209.5 269 46.5
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 3.9e-52 209.1 235 49.8
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 3.9e-52 209.1 262 46.9
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 5.0e-52 208.8 238 47.5
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 5.0e-52 208.8 270 46.3
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 6.6e-52 208.4 266 45.1
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 1.1e-51 207.6 269 45.0
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 1.5e-51 207.2 269 45.7
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 1.5e-51 207.2 270 44.8
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 2.5e-51 206.5 266 44.4
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 2.5e-51 206.5 272 46.0
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 2.5e-51 206.5 267 46.4
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 3.3e-51 206.1 249 46.2
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 3.3e-51 206.1 266 44.7
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 4.3e-51 205.7 269 46.5
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 9.5e-51 204.5 238 47.5
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 1.6e-50 203.8 269 44.2
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 2.8e-50 203.0 267 46.8
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 2.8e-50 203.0 269 43.9
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 4.7e-50 202.2 266 46.2
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 4.7e-50 202.2 271 45.4
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 6.2e-50 201.8 263 46.0
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 8.0e-50 201.4 268 46.3
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.0e-49 201.1 270 45.6
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 1.4e-49 200.7 247 47.0
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.2e-48 197.6 243 46.9
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 1.2e-48 197.6 256 44.1
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 2.0e-48 196.8 268 45.9
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 2.0e-48 196.8 268 45.9
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 2.0e-48 196.8 264 48.1
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 4.4e-48 195.7 245 49.0
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 7.5e-48 194.9 258 43.4
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 7.5e-48 194.9 245 49.4
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 7.5e-48 194.9 245 49.4
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 9.8e-48 194.5 266 42.9
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 9.8e-48 194.5 249 49.0
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 2.2e-47 193.4 257 48.2
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 2.9e-47 193.0 241 45.6
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 3.7e-47 192.6 248 44.8
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 8.3e-47 191.4 265 45.7
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 5.4e-46 188.7 258 43.4
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 5.4e-46 188.7 258 43.4
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 7.0e-46 188.3 270 43.0
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 9.2e-46 188.0 262 42.0
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 1.2e-45 187.6 242 45.0
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 1.2e-45 187.6 252 48.8
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 3.5e-45 186.0 260 42.7
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 3.5e-45 186.0 260 42.7
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 4.6e-45 185.7 253 41.9
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 6.0e-45 185.3 258 44.2
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 7.8e-45 184.9 265 41.5
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 1.3e-44 184.1 242 47.1
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 1.7e-44 183.7 265 43.0
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 5.0e-44 182.2 266 42.9
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 2.5e-43 179.9 263 41.1
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 3.3e-43 179.5 264 42.4
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 5.6e-43 178.7 256 41.4
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 5.6e-43 178.7 256 40.2
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 9.5e-43 177.9 256 40.6
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 9.5e-43 177.9 236 45.3
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 1.2e-42 177.6 256 41.0
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 1.6e-42 177.2 259 40.9
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 3.1e-41 172.9 237 43.0
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 6.8e-41 171.8 268 39.2
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 2.9e-39 166.4 234 44.4
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 3.2e-38 162.9 214 45.3
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 2.3e-36 156.8 259 38.6
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 3.0e-36 156.4 259 39.0
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 5.1e-36 155.6 252 39.7
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 8.6e-36 154.8 214 41.1
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 8.6e-36 154.8 253 40.3
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 3.6e-34 149.4 246 41.5
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 1.8e-33 147.1 195 43.6
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 1.8e-33 147.1 242 40.9
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 2.3e-33 146.7 117 64.1
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 1.6e-29 134.0 210 44.8
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 1.3e-28 131.0 208 45.2
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 8.6e-28 128.3 103 64.1
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 3.3e-27 126.3 185 41.1
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 8.1e-26 121.7 233 35.6
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 6.9e-25 118.6 157 39.5
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 8.9e-25 118.2 271 33.6
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 1.2e-24 117.9 157 39.5
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 1.9e-22 110.5 149 40.3
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 5.1e-20 102.4 221 32.1
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 6.9e-17 92.0 104 47.1
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 3.2e-14 83.2 217 31.3
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 2.7e-13 80.1 273 27.1
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 9.6e-11 71.6 125 40.0
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 3.1e-09 66.6 60 50.0
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 9.3e-06 55.1 177 31.6


User provided reference genes

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