Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G081700 Phaseolus vulgaris HOM05D003460 ORTHO05D004277 3.7e-70 268.1 133 100.0
Phvul.010G099000 Phaseolus vulgaris HOM05D003460 ORTHO05D004277 1.0e-64 250.0 128 96.1
VMungo0331G1375 Vigna mungo HOM05D003460 ORTHO05D004277 1.5e-63 246.1 128 93.8
Glyma.03G009200 Glycine max HOM05D003460 ORTHO05D004277 1.3e-62 243.0 128 92.2
Glyma.07G070700 Glycine max HOM05D003460 ORTHO05D004277 9.0e-61 236.9 128 91.4
Lj3g0003387 Lotus japonicus HOM05D003460 ORTHO05D004277 1.1e-58 229.9 128 85.9
Psat4g205160 Pisum sativum HOM05D003460 ORTHO05D004277 2.1e-57 225.7 128 83.6
arahy.Tifrunner.gnm1.ann1.H3LZVP Arachis hypogaea HOM05D003460 ORTHO05D004277 2.7e-57 225.3 128 85.2
TPR.G8688 Trifolium pratense HOM05D003460 ORTHO05D004277 2.7e-57 225.3 128 82.0
Ca_23633_v3 Cicer arietinum L. HOM05D003460 ORTHO05D004277 1.4e-56 223.0 127 84.3
Medtr8g030800 Medicago truncatula HOM05D003460 ORTHO05D004277 3.0e-56 221.9 128 82.8
Lalb_Chr17g0339611 Lupinus albus HOM05D003460 ORTHO05D004277 5.1e-56 221.1 128 84.4
Lalb_Chr10g0096951 Lupinus albus HOM05D003460 ORTHO05D004277 1.5e-55 219.5 128 84.4
arahy.Tifrunner.gnm1.ann1.T9PB4Q Arachis hypogaea HOM05D003460 ORTHO05D004277 4.3e-55 218.0 136 80.1
Lalb_Chr04g0256941 Lupinus albus HOM05D003460 ORTHO05D004277 1.3e-54 216.5 128 82.0
Medtr7g077700 Medicago truncatula HOM05D003460 ORTHO05D004277 3.1e-53 211.8 128 80.5
Lj1g0005367 Lotus japonicus HOM05D003460 ORTHO05D004277 4.1e-53 211.5 128 81.2
Haze_15503 Corylus avellana HOM05D003460 ORTHO05D004277 2.6e-52 208.8 128 78.9
Cfa003927 Carpinus fangiana HOM05D003460 ORTHO05D004277 5.9e-52 207.6 128 78.9
Migut.O00143 Erythranthe guttata HOM05D003460 ORTHO05D004277 5.9e-52 207.6 128 78.9
VMungo1383G3436 Vigna mungo HOM05D003460 ORTHO05D004277 1.3e-51 206.5 128 80.5
TPR.G37789 Trifolium pratense HOM05D003460 ORTHO05D004277 1.7e-51 206.1 128 79.7
Ciclev10018441m.g Citrus clementina HOM05D003460 ORTHO05D004277 2.2e-51 205.7 128 78.1
QL08p048825 Quercus lobata HOM05D003460 ORTHO05D004277 2.9e-51 205.3 128 77.3
SGA_v2.0_scaffold43G16414 Striga asiatica HOM05D003460 ORTHO05D004277 2.9e-51 205.3 128 78.1
Dinv43816 Davidia involucrata HOM05D003460 ORTHO05D004277 3.8e-51 204.9 127 77.2
TWI59G0279 Tripterygium wilfordii HOM05D003460 ORTHO05D004277 3.8e-51 204.9 128 78.9
Oeu053747.5 Olea europaea HOM05D003460 ORTHO05D004277 6.5e-51 204.1 128 77.3
Sed0006269 Sechium edule HOM05D003460 ORTHO05D004277 8.5e-51 203.8 128 76.6
Phvul.008G142400 Phaseolus vulgaris HOM05D003460 ORTHO05D004277 1.1e-50 203.4 128 78.9
CiPaw.01G061200 Carya illinoinensis HOM05D003460 ORTHO05D004277 1.4e-50 203.0 128 77.3
Psat3g108400 Pisum sativum HOM05D003460 ORTHO05D004277 1.4e-50 203.0 128 78.1
GSVIVG01026933001 Vitis vinifera HOM05D003460 ORTHO05D004277 1.4e-50 203.0 128 75.8
MSTRG.17267 Avicennia marina HOM05D003460 ORTHO05D004277 1.9e-50 202.6 128 77.3
Dinv32483 Davidia involucrata HOM05D003460 ORTHO05D004277 2.5e-50 202.2 127 77.2
SGA_v2.0_scaffold11G05665 Striga asiatica HOM05D003460 ORTHO05D004277 2.5e-50 202.2 128 76.6
Actinidia20904 Actinidia chinensis HOM05D003460 ORTHO05D004277 3.2e-50 201.8 128 75.8
FvH4_7g14270 Fragaria vesca HOM05D003460 ORTHO05D004277 3.2e-50 201.8 128 74.2
FAN01G0910 Fragaria x ananassa HOM05D003460 ORTHO05D004277 3.2e-50 201.8 128 74.2
FAN03G0059 Fragaria x ananassa HOM05D003460 ORTHO05D004277 3.2e-50 201.8 128 74.2
FAN06G0746 Fragaria x ananassa HOM05D003460 ORTHO05D004277 3.2e-50 201.8 128 74.2
FAN06G4334 Fragaria x ananassa HOM05D003460 ORTHO05D004277 3.2e-50 201.8 128 74.2
Lsat_1_v5_gn_3_137161 Lactuca sativa HOM05D003460 ORTHO05D004277 3.2e-50 201.8 128 76.6
Peaxi162Scf00020g00327 Petunia axillaris HOM05D003460 ORTHO05D004277 3.2e-50 201.8 128 76.6
CANSAT56G1950 Cannabis sativa HOM05D003460 ORTHO05D004277 4.2e-50 201.4 128 75.8
Ca_07919_v3 Cicer arietinum L. HOM05D003460 ORTHO05D004277 5.5e-50 201.1 128 78.1
ATR0680G344 Amborella trichopoda HOM05D003460 ORTHO05D004277 7.2e-50 200.7 128 75.8
COL.COLO4_12713 Corchorus olitorius HOM05D003460 ORTHO05D004277 7.2e-50 200.7 128 74.2
FAN10G2005 Fragaria x ananassa HOM05D003460 ORTHO05D004277 7.2e-50 200.7 128 73.4
Thecc.01G359000 Theobroma cacao HOM05D003460 ORTHO05D004277 9.4e-50 200.3 128 75.0
Nitab4.5_0000583g0090 Nicotiana tabacum HOM05D003460 ORTHO05D004277 1.2e-49 199.9 128 75.8
ClCG05G001530 Citrullus lanatus HOM05D003460 ORTHO05D004277 1.6e-49 199.5 128 74.2
MELO3C006109.2 Cucumis melo HOM05D002082 ORTHO05D002130 1.6e-49 199.5 128 74.2
Manes.05G034300 Manihot esculenta HOM05D003460 ORTHO05D004277 1.6e-49 199.5 128 75.8
Nitab4.5_0000885g0020 Nicotiana tabacum HOM05D003460 ORTHO05D004277 1.6e-49 199.5 128 75.0
FAN10G1682 Fragaria x ananassa HOM05D003460 ORTHO05D004277 2.1e-49 199.1 128 73.4
Glyma.09G259400 Glycine max HOM05D003460 ORTHO05D004277 2.7e-49 198.7 128 78.1
Aqoxy7G00308 Aquilegia oxysepala HOM05D003460 ORTHO05D004277 3.6e-49 198.4 128 75.8
HanXRQChr03g0093461 Helianthus annuus HOM05D003460 ORTHO05D004277 3.6e-49 198.4 128 74.2
Potri.014G084500 Populus trichocarpa HOM05D003460 ORTHO05D004277 3.6e-49 198.4 128 76.6
RcHm_v2.0_Chr1g0355261 Rosa chinensis HOM05D003460 ORTHO05D004277 3.6e-49 198.4 128 72.7
Sabra14G0061300 Salix brachista HOM05D003460 ORTHO05D004277 3.6e-49 198.4 128 76.6
Actinidia10010 Actinidia chinensis HOM05D003460 ORTHO05D004277 4.7e-49 198.0 128 73.4
PGR042G0360 Punica granatum HOM05D003460 ORTHO05D004277 4.7e-49 198.0 128 74.2
CsaV3_3G008910 Cucumis sativus L. HOM05D003460 ORTHO05D004277 6.1e-49 197.6 128 73.4
ECA240G3092 Erigeron canadensis HOM05D003460 ORTHO05D004277 6.1e-49 197.6 128 75.0
HanXRQChr13g0426551 Helianthus annuus HOM05D003460 ORTHO05D004277 6.1e-49 197.6 128 74.2
Cc02_g38020 Coffea canephora HOM05D003460 ORTHO05D004277 7.9e-49 197.2 128 75.0
MD07G1137100 Malus domestica HOM05D003460 ORTHO05D004277 7.9e-49 197.2 128 73.4
CAN.G78.79 Capsicum annuum HOM05D003460 ORTHO05D004277 1.0e-48 196.8 128 73.4
Nn1g01533 Nelumbo nucifera HOM05D003460 ORTHO05D004277 1.0e-48 196.8 128 73.4
Glyma.18G232900 Glycine max HOM05D003460 ORTHO05D004277 1.4e-48 196.4 128 77.3
Manes.01G256801 Manihot esculenta HOM05D003460 ORTHO05D004277 1.4e-48 196.4 128 74.2
vmacro13290 Vaccinium macrocarpon HOM05D003460 ORTHO05D004277 1.4e-48 196.4 128 72.7
EL10Ac1g00416 Beta vulgaris HOM05D003460 ORTHO05D004277 1.8e-48 196.1 128 73.4
Migut.N01446 Erythranthe guttata HOM05D003460 ORTHO05D004277 1.8e-48 196.1 128 75.8
Solyc01g094620.3 Solanum lycopersicum HOM05D003460 ORTHO05D004277 2.3e-48 195.7 128 73.4
Sopen01g038430 Solanum pennellii HOM05D003460 ORTHO05D004277 2.3e-48 195.7 128 73.4
CSS0010662 Camellia sinensis var. sinensis HOM05D003460 ORTHO05D004277 3.0e-48 195.3 128 74.2
Prupe.2G170500 Prunus persica HOM05D003460 ORTHO05D004277 3.0e-48 195.3 128 73.4
Sabra02G0126900 Salix brachista HOM05D003460 ORTHO05D004277 3.0e-48 195.3 128 75.0
Potri.002G159900 Populus trichocarpa HOM05D003460 ORTHO05D004277 3.9e-48 194.9 128 75.0
PSO782G4956 Papaver somniferum HOM05D003460 ORTHO05D004277 5.1e-48 194.5 128 74.2
MD01G1060600 Malus domestica HOM05D003460 ORTHO05D004277 8.8e-48 193.7 128 72.7
CSS0048858 Camellia sinensis var. sinensis HOM05D003460 ORTHO05D004277 1.5e-47 193.0 129 73.6
Eucgr.E00136 Eucalyptus grandis HOM05D003460 ORTHO05D004277 2.0e-47 192.6 128 73.4
TAR636G2440 Trochodendron aralioides HOM05D003460 ORTHO05D004277 2.0e-47 192.6 128 76.6
THA.LOC104825837 Tarenaya hassleriana HOM05D003460 ORTHO05D004277 2.6e-47 192.2 128 73.4
CiPaw.02G030700 Carya illinoinensis HOM05D003460 ORTHO05D004277 3.3e-47 191.8 128 75.0
PSO063G5861 Papaver somniferum HOM05D003460 ORTHO05D004277 3.3e-47 191.8 128 73.4
Sed0017726 Sechium edule HOM05D003460 ORTHO05D004277 3.3e-47 191.8 128 70.3
AUR62004357 Chenopodium quinoa HOM05D003460 ORTHO05D004277 5.7e-47 191.0 128 71.9
AUR62022565 Chenopodium quinoa HOM05D003460 ORTHO05D004277 7.4e-47 190.7 128 72.7
Ah.05g180610 Amaranthus hybridus HOM05D003460 ORTHO05D004277 9.7e-47 190.3 128 70.3
THA.LOC104801439 Tarenaya hassleriana HOM05D003460 ORTHO05D004277 1.3e-46 189.9 128 74.2
Duzib133G1367 Durio zibethinus HOM05D003460 ORTHO05D004277 2.2e-46 189.1 128 70.3
Duzib268G1202 Durio zibethinus HOM05D003460 ORTHO05D004277 2.8e-46 188.7 128 71.1
Gorai.008G121300 Gossypium raimondii HOM05D003460 ORTHO05D004277 2.8e-46 188.7 128 71.9
Gohir.D11G093200 Gossypium hirsutum HOM05D003460 ORTHO05D004277 4.8e-46 188.0 128 72.7
Gorai.007G099500 Gossypium raimondii HOM05D003460 ORTHO05D004277 4.8e-46 188.0 128 72.7
DCAR_008608 Daucus carota HOM05D003460 ORTHO05D004277 2.4e-45 185.7 128 68.0
Os07g0648266 Oryza sativa ssp. japonica HOM05D003460 ORTHO05D004277 2.4e-45 185.7 128 69.5
Sc23g0002910 Simmondsia chinensis HOM05D003460 ORTHO05D004277 2.4e-45 185.7 130 70.8
Nn6g33423 Nelumbo nucifera HOM05D003460 ORTHO05D004277 4.1e-45 184.9 128 70.3
Rhsim07G0015100 Rhododendron simsii HOM05D003460 ORTHO05D004277 1.2e-44 183.3 147 62.6
Zm00001eb404370 Zea mays HOM05D003460 ORTHO05D004277 2.0e-44 182.6 129 68.2
Hund27274 Selenicereus undatus HOM05D003460 ORTHO05D004277 2.6e-44 182.2 128 68.0
TAR629G2967 Trochodendron aralioides HOM05D003460 ORTHO05D004277 4.5e-44 181.4 128 72.7
Lj7C512T7 Lonicera japonica HOM05D003460 ORTHO05D004277 5.9e-44 181.0 129 72.1
Atru.chr5.497 Acer truncatum HOM05D003460 ORTHO05D004277 2.9e-43 178.7 129 69.8
Carub.0006s3681 Capsella rubella HOM05D003460 ORTHO05D004277 5.5e-42 174.5 128 70.3
AL6G53010 Arabidopsis lyrata HOM05D003460 ORTHO05D004277 9.4e-42 173.7 128 71.1
BcaB01g02164 Brassica carinata HOM05D003460 ORTHO05D004277 9.4e-42 173.7 128 70.3
BcaB01g02251 Brassica carinata HOM05D003460 ORTHO05D004277 9.4e-42 173.7 128 70.3
BcaC01g06879 Brassica carinata HOM05D003460 ORTHO05D004277 1.6e-41 172.9 128 70.3
A03p32180 Brassica napus HOM05D003460 ORTHO05D004277 1.6e-41 172.9 128 70.3
C03p39210 Brassica napus HOM05D003460 ORTHO05D004277 1.6e-41 172.9 128 70.3
BolC3t16192H Brassica oleracea HOM05D003460 ORTHO05D004277 1.6e-41 172.9 128 70.3
BraA03t12388Z Brassica rapa HOM05D003460 ORTHO05D004277 1.6e-41 172.9 128 70.3
AT4G00450 Arabidopsis thaliana HOM05D003460 ORTHO05D004277 2.1e-41 172.6 128 70.3
Thhalv10028357m.g Eutrema salsugineum HOM05D003460 ORTHO05D004277 2.7e-41 172.2 127 70.1
SEGI_03490 Sequoiadendron giganteum HOM05D003460 ORTHO05D004277 2.7e-41 172.2 129 62.8
Aa31LG5G530 Aethionema arabicum HOM05D003460 ORTHO05D004277 3.6e-41 171.8 128 71.1
A09p00470 Brassica napus HOM05D003460 ORTHO05D004277 3.6e-41 171.8 128 71.1
Sp6g00490 Schrenkiella parvula HOM05D003460 ORTHO05D004277 4.7e-41 171.4 128 70.3
BolC9t52974H Brassica oleracea HOM05D003460 ORTHO05D004277 6.1e-41 171.0 128 70.3
BcaC04g24169 Brassica carinata HOM05D003460 ORTHO05D004277 1.4e-40 169.9 128 69.5
C09p00390 Brassica napus HOM05D003460 ORTHO05D004277 1.4e-40 169.9 128 69.5
CDE06G2505 Ceratophyllum demersum HOM05D003460 ORTHO05D004277 1.7e-38 162.9 128 63.3
BraA09t35713Z Brassica rapa HOM05D003460 ORTHO05D004277 3.1e-37 158.7 149 60.4
Aa31LG1G11050 Aethionema arabicum HOM05D003460 ORTHO05D004277 9.1e-37 157.1 128 63.3
HPP92_028275 Vanilla planifolia HOM05D003460 ORTHO05D004277 1.2e-36 156.8 112 67.9
Os10g0550066 Oryza sativa ssp. japonica HOM05D003460 ORTHO05D004277 2.2e-35 152.5 129 58.1
MapolyY_A0045 Marchantia polymorpha HOM05D003460 ORTHO05D004277 2.9e-35 152.1 116 62.9
Mapoly0018s0023 Marchantia polymorpha HOM05D003460 ORTHO05D004277 3.8e-35 151.8 116 62.9
unitig_0.g1263 Utricularia gibba HOM05D003460 ORTHO05D004277 5.5e-34 147.9 128 57.0
Pp3c24_11620 Physcomitrium patens HOM05D003460 ORTHO05D004277 3.6e-33 145.2 107 63.6
Pp3c8_17600 Physcomitrium patens HOM05D003460 ORTHO05D004277 6.1e-33 144.4 107 62.6
HPP92_025394 Vanilla planifolia HOM05D003460 ORTHO05D004277 4.8e-30 134.8 129 56.6
Pp3c11_14610 Physcomitrium patens HOM05D003460 ORTHO05D004277 3.5e-28 128.6 91 62.6
SMO147G0395 Selaginella moellendorffii HOM05D003460 ORTHO05D004277 3.5e-28 128.6 114 54.4
Zm00001eb382450 Zea mays HOM05D003460 ORTHO05D004277 2.9e-27 125.6 88 63.6
Zm00001eb055510 Zea mays HOM05D003460 ORTHO05D004277 5.5e-26 121.3 84 66.7
CDE04G0432 Ceratophyllum demersum HOM05D003460 ORTHO05D004277 2.2e-22 109.4 128 48.4
CBR_g44444 Chara braunii HOM05D003460 ORTHO05D004277 4.8e-22 108.2 114 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2569 Anthoceros agrestis HOM05D003460 ORTHO05D004277 4.1e-21 105.1 107 49.5
Cfa003926 Carpinus fangiana HOM05D003460 ORTHO05D004277 3.8e-19 98.6 77 66.2
SalBow3G0963 Salvia bowleyana HOM05D003460 ORTHO05D004277 6.6e-19 97.8 95 52.6
Oeu052946.1 Olea europaea HOM05D003460 ORTHO05D004277 2.1e-17 92.8 52 80.8
unitig_61.g26386 Utricularia gibba HOM05D003460 ORTHO05D004277 1.8e-16 89.7 72 61.1
SHI13448 Sapria himalayana HOM05D003460 ORTHO05D004277 2.6e-15 85.9 53 71.7
SHI13450 Sapria himalayana HOM05D003460 ORTHO05D000014 1.3e-14 83.6 118 39.8


User provided reference genes

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